Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222527191

Identifier: 222527191

GI number: 222527191

Start: 4924693

End: 4925433

Strand: Direct

Name: 222527191

Synonym: Chy400_3973

Alternate gene names: NA

Gene position: 4924693-4925433 (Clockwise)

Preceding gene: 222527190

Following gene: 222527192

Centisome position: 93.47

GC content: 49.66

Gene sequence:

>741_bases
ATGTGGCGCAGCGCCGGCAGCGGCCCGGTCAACCCGCAGGACCTGAACCGCTATGCCTACGCGCTGAACAATCCGCTGAA
ATACACCGACCCGACGGGGCATTGCCCAGCTCCCACCAACGACTCAGGCCATGTGATCTGTGTAGACTTTTTTATCCAAA
CTCATACCATCATCTTCGGAACGGGAAAAGGTGATGGACGAGGTTTTGATCCAAACTCACATTCCGCAGAGTCTCGTGCA
TACTTCTACTTATATCTGGATGAGCGTGGCGTGCTGCAAAACGTCGTATCGCACATTAACCCATCGTGTGTGATTGTGGT
TGGGTGTTTTCAACCACTGAATGAACACAATGTGTTGATAGCATCACAAGACCCGGATACGCTTGACATTACGCTATCAT
GGAACCTGACGAATGGTGTTTCAAGTCACCTCTTGCGCCTTAGCGAGGACATCTATCGCGCAGAGGCAGACATTGGATCA
ATGGCGATAGGCTCTACCCTTGTGGGTTTCATCGGAAGAATGCTTCCAGCCATCAATGGTACGTTGACCCTATCTTTATC
TGCTGATGGGCAGTTCAACCTTTCTCGCTTGAACCGCGATCCATATCCTAGTTTGGAAATCTACCACTATTACAACGGAG
CATTACAGTATACCATTGCGCGATTGCCTGAATGTGACTTTGTAGGTAATCTGGGGCCATTCATTTGGCTTAATCCCCTG
GCTCGCAATGAAACACGTTAG

Upstream 100 bases:

>100_bases
ATACGACGATCCCGACATCGGGCGGTTTCTCTCCGCCGACACCATCATCCCCGCCAGCCCGCCGCTCACCGTCTGGCCGA
GCGATGCAACGGCGCAGGGG

Downstream 100 bases:

>100_bases
TCGGAGGTTATACTGCTATGGGGCATTCAACAATCACGACACGTCCACTGTATCGACGTATTGTGCTAGTGTATCTCATC
ACCATGGCCTCGCTGGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MWRSAGSGPVNPQDLNRYAYALNNPLKYTDPTGHCPAPTNDSGHVICVDFFIQTHTIIFGTGKGDGRGFDPNSHSAESRA
YFYLYLDERGVLQNVVSHINPSCVIVVGCFQPLNEHNVLIASQDPDTLDITLSWNLTNGVSSHLLRLSEDIYRAEADIGS
MAIGSTLVGFIGRMLPAINGTLTLSLSADGQFNLSRLNRDPYPSLEIYHYYNGALQYTIARLPECDFVGNLGPFIWLNPL
ARNETR

Sequences:

>Translated_246_residues
MWRSAGSGPVNPQDLNRYAYALNNPLKYTDPTGHCPAPTNDSGHVICVDFFIQTHTIIFGTGKGDGRGFDPNSHSAESRA
YFYLYLDERGVLQNVVSHINPSCVIVVGCFQPLNEHNVLIASQDPDTLDITLSWNLTNGVSSHLLRLSEDIYRAEADIGS
MAIGSTLVGFIGRMLPAINGTLTLSLSADGQFNLSRLNRDPYPSLEIYHYYNGALQYTIARLPECDFVGNLGPFIWLNPL
ARNETR
>Mature_246_residues
MWRSAGSGPVNPQDLNRYAYALNNPLKYTDPTGHCPAPTNDSGHVICVDFFIQTHTIIFGTGKGDGRGFDPNSHSAESRA
YFYLYLDERGVLQNVVSHINPSCVIVVGCFQPLNEHNVLIASQDPDTLDITLSWNLTNGVSSHLLRLSEDIYRAEADIGS
MAIGSTLVGFIGRMLPAINGTLTLSLSADGQFNLSRLNRDPYPSLEIYHYYNGALQYTIARLPECDFVGNLGPFIWLNPL
ARNETR

Specific function: Unknown

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27167; Mature: 27167

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRSAGSGPVNPQDLNRYAYALNNPLKYTDPTGHCPAPTNDSGHVICVDFFIQTHTIIFG
CCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEE
TGKGDGRGFDPNSHSAESRAYFYLYLDERGVLQNVVSHINPSCVIVVGCFQPLNEHNVLI
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCEEE
ASQDPDTLDITLSWNLTNGVSSHLLRLSEDIYRAEADIGSMAIGSTLVGFIGRMLPAING
ECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
TLTLSLSADGQFNLSRLNRDPYPSLEIYHYYNGALQYTIARLPECDFVGNLGPFIWLNPL
EEEEEEECCCCEEHHHCCCCCCCCEEEEEEECCEEEEHHHHCCCCCCCCCCCCEEEECCH
ARNETR
HCCCCC
>Mature Secondary Structure
MWRSAGSGPVNPQDLNRYAYALNNPLKYTDPTGHCPAPTNDSGHVICVDFFIQTHTIIFG
CCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEE
TGKGDGRGFDPNSHSAESRAYFYLYLDERGVLQNVVSHINPSCVIVVGCFQPLNEHNVLI
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCEEE
ASQDPDTLDITLSWNLTNGVSSHLLRLSEDIYRAEADIGSMAIGSTLVGFIGRMLPAING
ECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
TLTLSLSADGQFNLSRLNRDPYPSLEIYHYYNGALQYTIARLPECDFVGNLGPFIWLNPL
EEEEEEECCCCEEHHHCCCCCCCCEEEEEEECCEEEEHHHHCCCCCCCCCCCCEEEECCH
ARNETR
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA