Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222527185

Identifier: 222527185

GI number: 222527185

Start: 4919185

End: 4920165

Strand: Direct

Name: 222527185

Synonym: Chy400_3967

Alternate gene names: NA

Gene position: 4919185-4920165 (Clockwise)

Preceding gene: 222527180

Following gene: 222527186

Centisome position: 93.36

GC content: 59.73

Gene sequence:

>981_bases
ATGTGGTGGCAATCGCTTCTCGATCACTGGATTCTTGCGCTTCACATTCCTGACGGGTTTCTGCACGCACCCGTTGCCCT
ACTCTGGTGGGTGCCAACGGTGATTATGATCGGTCTTGCCCTACGCGCCGTGCAACAATCGGCTGCCGAACGCACCGTCC
CCCTGATGAGTGTCCTGGCTGCGGCTATCTTCGCCGCACAGATGCTGAATTTCCCCATTGTCGGTGGTACATCCGGTCAC
CTCCTGGGTGGTGTGCTTGCTGCTATCGTCCTGGGGCCATGGGCCGGTATGGTCGTGATGACATGTGTGATTGTCCTTCA
GGCCATTGTGTTTCAAGATGGCGGTATCGTGGCTATGGGGGCCAATATCTTCAACATGGGGATTGCCACCGCCGCGATTG
GTGGCTGGATCGCCCGTCCCCTGCTGGTTCAGGATCATGCCTTCACCACCAATCGACTCCGTATTGCCCTGGTTGCTACC
GCTACCGGCTGGTTGTCGGTGATGGTCGCCGCCGTTCTTACCTCTGCGCAACTCGTGCTCTCTGACCTGCCGGCAGGAAT
CGTCTTTCCGGCGATGCTCGGCGTCCATGCACTGATTGGGATTGGCGAAGGAGTATTGACGGCGGCTGCGTTGCTCGCCC
TGGTCACGGCCCGGCCAGACATCCTGCAGCCAGGCGATACGCCAACCCCGATGCGCACCCAGTTGCTAACAGCAGGTGTG
TTCATCGCTGCTCTGCTTGCCGTGCTTGCACCGCTTGCCTCTCCCGACCCGGATGGGCTTGAGCGGGTCGCTGAAGATGT
CGGGTTCCTTGATCGTGCCCTCGACGCACCATACCAGATTATGCCCGACTATACCGTCCCATTGCTCGGCGAGACTCCAC
TCTCGACGATTGTCTCCGGTCTCATCGGGGTCATCATCACAGTTGGCATCGTGTGGGGCATTGCTGTCATGCTCCGCGCC
CGCAGGCCATCACGCTCGTAA

Upstream 100 bases:

>100_bases
TTTATAATGCACCGACATCACCAGAAGGTGCCGTATCGTTGATTTGGTTTATAATGGAACAGGTACAACACCAATACCGG
CTAGCATAGAGGGTTTCACC

Downstream 100 bases:

>100_bases
CGACCCCTATGCAGGCAGGGTATACCGCTGGAGACGGACGAGTCAAGACCGGGCTGGCCCTCGGATTTGTGCTCACGATG
GCGTGGATTCCGGTGGCAGC

Product: cobalamin (vitamin B12) biosynthesis CbiM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MWWQSLLDHWILALHIPDGFLHAPVALLWWVPTVIMIGLALRAVQQSAAERTVPLMSVLAAAIFAAQMLNFPIVGGTSGH
LLGGVLAAIVLGPWAGMVVMTCVIVLQAIVFQDGGIVAMGANIFNMGIATAAIGGWIARPLLVQDHAFTTNRLRIALVAT
ATGWLSVMVAAVLTSAQLVLSDLPAGIVFPAMLGVHALIGIGEGVLTAAALLALVTARPDILQPGDTPTPMRTQLLTAGV
FIAALLAVLAPLASPDPDGLERVAEDVGFLDRALDAPYQIMPDYTVPLLGETPLSTIVSGLIGVIITVGIVWGIAVMLRA
RRPSRS

Sequences:

>Translated_326_residues
MWWQSLLDHWILALHIPDGFLHAPVALLWWVPTVIMIGLALRAVQQSAAERTVPLMSVLAAAIFAAQMLNFPIVGGTSGH
LLGGVLAAIVLGPWAGMVVMTCVIVLQAIVFQDGGIVAMGANIFNMGIATAAIGGWIARPLLVQDHAFTTNRLRIALVAT
ATGWLSVMVAAVLTSAQLVLSDLPAGIVFPAMLGVHALIGIGEGVLTAAALLALVTARPDILQPGDTPTPMRTQLLTAGV
FIAALLAVLAPLASPDPDGLERVAEDVGFLDRALDAPYQIMPDYTVPLLGETPLSTIVSGLIGVIITVGIVWGIAVMLRA
RRPSRS
>Mature_326_residues
MWWQSLLDHWILALHIPDGFLHAPVALLWWVPTVIMIGLALRAVQQSAAERTVPLMSVLAAAIFAAQMLNFPIVGGTSGH
LLGGVLAAIVLGPWAGMVVMTCVIVLQAIVFQDGGIVAMGANIFNMGIATAAIGGWIARPLLVQDHAFTTNRLRIALVAT
ATGWLSVMVAAVLTSAQLVLSDLPAGIVFPAMLGVHALIGIGEGVLTAAALLALVTARPDILQPGDTPTPMRTQLLTAGV
FIAALLAVLAPLASPDPDGLERVAEDVGFLDRALDAPYQIMPDYTVPLLGETPLSTIVSGLIGVIITVGIVWGIAVMLRA
RRPSRS

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 34088; Mature: 34088

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWWQSLLDHWILALHIPDGFLHAPVALLWWVPTVIMIGLALRAVQQSAAERTVPLMSVLA
CCHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAIFAAQMLNFPIVGGTSGHLLGGVLAAIVLGPWAGMVVMTCVIVLQAIVFQDGGIVAMG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
ANIFNMGIATAAIGGWIARPLLVQDHAFTTNRLRIALVATATGWLSVMVAAVLTSAQLVL
CHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH
SDLPAGIVFPAMLGVHALIGIGEGVLTAAALLALVTARPDILQPGDTPTPMRTQLLTAGV
HHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
FIAALLAVLAPLASPDPDGLERVAEDVGFLDRALDAPYQIMPDYTVPLLGETPLSTIVSG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHH
LIGVIITVGIVWGIAVMLRARRPSRS
HHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MWWQSLLDHWILALHIPDGFLHAPVALLWWVPTVIMIGLALRAVQQSAAERTVPLMSVLA
CCHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAIFAAQMLNFPIVGGTSGHLLGGVLAAIVLGPWAGMVVMTCVIVLQAIVFQDGGIVAMG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
ANIFNMGIATAAIGGWIARPLLVQDHAFTTNRLRIALVATATGWLSVMVAAVLTSAQLVL
CHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH
SDLPAGIVFPAMLGVHALIGIGEGVLTAAALLALVTARPDILQPGDTPTPMRTQLLTAGV
HHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
FIAALLAVLAPLASPDPDGLERVAEDVGFLDRALDAPYQIMPDYTVPLLGETPLSTIVSG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHH
LIGVIITVGIVWGIAVMLRARRPSRS
HHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]