| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is cysZ [H]
Identifier: 222527049
GI number: 222527049
Start: 4770455
End: 4771207
Strand: Reverse
Name: cysZ [H]
Synonym: Chy400_3828
Alternate gene names: 222527049
Gene position: 4771207-4770455 (Counterclockwise)
Preceding gene: 222527050
Following gene: 222527044
Centisome position: 90.55
GC content: 55.25
Gene sequence:
>753_bases ATGCAAGCATTTATTGACGGTTTGAGTTTTCCACTGCGCGCCGTACGGTTCATCGCTAGCCAGCCGATGCTCTGGCGCTA CATCGTCATCCCGATTGCGCTGAATATTTTGGTAGGGTTCGTGCTCTACGCCACCCTGTTATGGGCCGGCGTTCGGGCAA TCGAGGCGCTGCTCGCCGATTGGCCGGAGTTGATCGCGTGGTTCGTCTGGCTCTTACTGATCATTGTCCTCTTCGTCGGA ATTGGCTACCTGATGGTACGCTTTGGCGTTGTCATCGGTTCGCCTTTTTACAGCCGCTTATCGGAACTGATTGAAGAACA GTTGCGCGGTGTTGCCAGAACAACGTCACCGGCTTCCCCGGCTTCTATCGCATACGATCTCTTCCGCGCCTTGCTGTTCG AGCTGAAGAAGTTGATCTTCTTGCTGGCGTTTGGGATACCCGCGCTATTGCTCAATGTGCTGCCTGGCGTCGGCACGATG CTGGGAACGGCAGCCGGGATCGTCATTGGCGTCACCATTTCATGTCTCGACTTTTTCGATCCACCGCTTGAGCGACGCCG ACTGTCGTTTCGCGCGAAACTCGGCTATATTCGCCACCATCTCCCAGCCAGTGCCGGTTTTGGTTTGATCTGTCTGGGAC TGGTGAGTGTGCCGTTCCTTAATCTTCTCGCTGTACCGGTCTGCATCACCGCAGGTACGCTCTTCTTTTGTGAGAGATCG CCTGTCTATCTCGACGATGGCACAATGCGGTAG
Upstream 100 bases:
>100_bases CTATTCGTCTGTGCCGGGTACGATTGGTCACAAATCGCAGCACGGCTGGAAGCAGCTATCCGTTGGTAGTGACATCGGTA TCAACAGGAATCTTTGAGGT
Downstream 100 bases:
>100_bases ATATTTCCGTTGCGGTCGTCCGAGACAAAGATGGTGCCATTGGCGGCTACGGTGACTCCTGCCGGTCGGCCCCAGGCACT GCCACACTCCTGCTGGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MQAFIDGLSFPLRAVRFIASQPMLWRYIVIPIALNILVGFVLYATLLWAGVRAIEALLADWPELIAWFVWLLLIIVLFVG IGYLMVRFGVVIGSPFYSRLSELIEEQLRGVARTTSPASPASIAYDLFRALLFELKKLIFLLAFGIPALLLNVLPGVGTM LGTAAGIVIGVTISCLDFFDPPLERRRLSFRAKLGYIRHHLPASAGFGLICLGLVSVPFLNLLAVPVCITAGTLFFCERS PVYLDDGTMR
Sequences:
>Translated_250_residues MQAFIDGLSFPLRAVRFIASQPMLWRYIVIPIALNILVGFVLYATLLWAGVRAIEALLADWPELIAWFVWLLLIIVLFVG IGYLMVRFGVVIGSPFYSRLSELIEEQLRGVARTTSPASPASIAYDLFRALLFELKKLIFLLAFGIPALLLNVLPGVGTM LGTAAGIVIGVTISCLDFFDPPLERRRLSFRAKLGYIRHHLPASAGFGLICLGLVSVPFLNLLAVPVCITAGTLFFCERS PVYLDDGTMR >Mature_250_residues MQAFIDGLSFPLRAVRFIASQPMLWRYIVIPIALNILVGFVLYATLLWAGVRAIEALLADWPELIAWFVWLLLIIVLFVG IGYLMVRFGVVIGSPFYSRLSELIEEQLRGVARTTSPASPASIAYDLFRALLFELKKLIFLLAFGIPALLLNVLPGVGTM LGTAAGIVIGVTISCLDFFDPPLERRRLSFRAKLGYIRHHLPASAGFGLICLGLVSVPFLNLLAVPVCITAGTLFFCERS PVYLDDGTMR
Specific function: Possibly involved in sulfate transport [H]
COG id: COG2981
COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CysZ family [H]
Homologues:
Organism=Escherichia coli, GI1788753, Length=235, Percent_Identity=23.4042553191489, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022985 - InterPro: IPR007496 [H]
Pfam domain/function: PF04401 DUF540 [H]
EC number: NA
Molecular weight: Translated: 27576; Mature: 27576
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAFIDGLSFPLRAVRFIASQPMLWRYIVIPIALNILVGFVLYATLLWAGVRAIEALLAD CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC WPELIAWFVWLLLIIVLFVGIGYLMVRFGVVIGSPFYSRLSELIEEQLRGVARTTSPASP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCH ASIAYDLFRALLFELKKLIFLLAFGIPALLLNVLPGVGTMLGTAAGIVIGVTISCLDFFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC PPLERRRLSFRAKLGYIRHHLPASAGFGLICLGLVSVPFLNLLAVPVCITAGTLFFCERS CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC PVYLDDGTMR CEEECCCCCC >Mature Secondary Structure MQAFIDGLSFPLRAVRFIASQPMLWRYIVIPIALNILVGFVLYATLLWAGVRAIEALLAD CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC WPELIAWFVWLLLIIVLFVGIGYLMVRFGVVIGSPFYSRLSELIEEQLRGVARTTSPASP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCH ASIAYDLFRALLFELKKLIFLLAFGIPALLLNVLPGVGTMLGTAAGIVIGVTISCLDFFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC PPLERRRLSFRAKLGYIRHHLPASAGFGLICLGLVSVPFLNLLAVPVCITAGTLFFCERS CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC PVYLDDGTMR CEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA