Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is cysZ [H]

Identifier: 222527049

GI number: 222527049

Start: 4770455

End: 4771207

Strand: Reverse

Name: cysZ [H]

Synonym: Chy400_3828

Alternate gene names: 222527049

Gene position: 4771207-4770455 (Counterclockwise)

Preceding gene: 222527050

Following gene: 222527044

Centisome position: 90.55

GC content: 55.25

Gene sequence:

>753_bases
ATGCAAGCATTTATTGACGGTTTGAGTTTTCCACTGCGCGCCGTACGGTTCATCGCTAGCCAGCCGATGCTCTGGCGCTA
CATCGTCATCCCGATTGCGCTGAATATTTTGGTAGGGTTCGTGCTCTACGCCACCCTGTTATGGGCCGGCGTTCGGGCAA
TCGAGGCGCTGCTCGCCGATTGGCCGGAGTTGATCGCGTGGTTCGTCTGGCTCTTACTGATCATTGTCCTCTTCGTCGGA
ATTGGCTACCTGATGGTACGCTTTGGCGTTGTCATCGGTTCGCCTTTTTACAGCCGCTTATCGGAACTGATTGAAGAACA
GTTGCGCGGTGTTGCCAGAACAACGTCACCGGCTTCCCCGGCTTCTATCGCATACGATCTCTTCCGCGCCTTGCTGTTCG
AGCTGAAGAAGTTGATCTTCTTGCTGGCGTTTGGGATACCCGCGCTATTGCTCAATGTGCTGCCTGGCGTCGGCACGATG
CTGGGAACGGCAGCCGGGATCGTCATTGGCGTCACCATTTCATGTCTCGACTTTTTCGATCCACCGCTTGAGCGACGCCG
ACTGTCGTTTCGCGCGAAACTCGGCTATATTCGCCACCATCTCCCAGCCAGTGCCGGTTTTGGTTTGATCTGTCTGGGAC
TGGTGAGTGTGCCGTTCCTTAATCTTCTCGCTGTACCGGTCTGCATCACCGCAGGTACGCTCTTCTTTTGTGAGAGATCG
CCTGTCTATCTCGACGATGGCACAATGCGGTAG

Upstream 100 bases:

>100_bases
CTATTCGTCTGTGCCGGGTACGATTGGTCACAAATCGCAGCACGGCTGGAAGCAGCTATCCGTTGGTAGTGACATCGGTA
TCAACAGGAATCTTTGAGGT

Downstream 100 bases:

>100_bases
ATATTTCCGTTGCGGTCGTCCGAGACAAAGATGGTGCCATTGGCGGCTACGGTGACTCCTGCCGGTCGGCCCCAGGCACT
GCCACACTCCTGCTGGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MQAFIDGLSFPLRAVRFIASQPMLWRYIVIPIALNILVGFVLYATLLWAGVRAIEALLADWPELIAWFVWLLLIIVLFVG
IGYLMVRFGVVIGSPFYSRLSELIEEQLRGVARTTSPASPASIAYDLFRALLFELKKLIFLLAFGIPALLLNVLPGVGTM
LGTAAGIVIGVTISCLDFFDPPLERRRLSFRAKLGYIRHHLPASAGFGLICLGLVSVPFLNLLAVPVCITAGTLFFCERS
PVYLDDGTMR

Sequences:

>Translated_250_residues
MQAFIDGLSFPLRAVRFIASQPMLWRYIVIPIALNILVGFVLYATLLWAGVRAIEALLADWPELIAWFVWLLLIIVLFVG
IGYLMVRFGVVIGSPFYSRLSELIEEQLRGVARTTSPASPASIAYDLFRALLFELKKLIFLLAFGIPALLLNVLPGVGTM
LGTAAGIVIGVTISCLDFFDPPLERRRLSFRAKLGYIRHHLPASAGFGLICLGLVSVPFLNLLAVPVCITAGTLFFCERS
PVYLDDGTMR
>Mature_250_residues
MQAFIDGLSFPLRAVRFIASQPMLWRYIVIPIALNILVGFVLYATLLWAGVRAIEALLADWPELIAWFVWLLLIIVLFVG
IGYLMVRFGVVIGSPFYSRLSELIEEQLRGVARTTSPASPASIAYDLFRALLFELKKLIFLLAFGIPALLLNVLPGVGTM
LGTAAGIVIGVTISCLDFFDPPLERRRLSFRAKLGYIRHHLPASAGFGLICLGLVSVPFLNLLAVPVCITAGTLFFCERS
PVYLDDGTMR

Specific function: Possibly involved in sulfate transport [H]

COG id: COG2981

COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CysZ family [H]

Homologues:

Organism=Escherichia coli, GI1788753, Length=235, Percent_Identity=23.4042553191489, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022985
- InterPro:   IPR007496 [H]

Pfam domain/function: PF04401 DUF540 [H]

EC number: NA

Molecular weight: Translated: 27576; Mature: 27576

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAFIDGLSFPLRAVRFIASQPMLWRYIVIPIALNILVGFVLYATLLWAGVRAIEALLAD
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPELIAWFVWLLLIIVLFVGIGYLMVRFGVVIGSPFYSRLSELIEEQLRGVARTTSPASP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCH
ASIAYDLFRALLFELKKLIFLLAFGIPALLLNVLPGVGTMLGTAAGIVIGVTISCLDFFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
PPLERRRLSFRAKLGYIRHHLPASAGFGLICLGLVSVPFLNLLAVPVCITAGTLFFCERS
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
PVYLDDGTMR
CEEECCCCCC
>Mature Secondary Structure
MQAFIDGLSFPLRAVRFIASQPMLWRYIVIPIALNILVGFVLYATLLWAGVRAIEALLAD
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPELIAWFVWLLLIIVLFVGIGYLMVRFGVVIGSPFYSRLSELIEEQLRGVARTTSPASP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCH
ASIAYDLFRALLFELKKLIFLLAFGIPALLLNVLPGVGTMLGTAAGIVIGVTISCLDFFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
PPLERRRLSFRAKLGYIRHHLPASAGFGLICLGLVSVPFLNLLAVPVCITAGTLFFCERS
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
PVYLDDGTMR
CEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA