Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222527040

Identifier: 222527040

GI number: 222527040

Start: 4759359

End: 4760942

Strand: Reverse

Name: 222527040

Synonym: Chy400_3819

Alternate gene names: NA

Gene position: 4760942-4759359 (Counterclockwise)

Preceding gene: 222527044

Following gene: 222527039

Centisome position: 90.36

GC content: 54.1

Gene sequence:

>1584_bases
ATGCGTACCAGATTTCTATTCAGCCTTCTATTCTGCCTGTTGGTAGCGCCACTGACTGCACTTTACGCAGCTCCTGGCCC
TCAGCCAGAATTACCATTACCTGCAGGTGATGCGCTGATAGCTCCGCCACCGGCTACCCTATCATTTGCGGTGGACGATG
ACCAACTCTCGCCTCGTTTGCCGAGTCAGTATCTGGCCGGACGGGTTGCTGTTCAGCTTATCTTGCCGGAAAGCACCGGT
TCCTTCGATCCTTCCACCGAAGACTGGAACGCTGCGCAAGTAGATCAGATTGTGAATGAGGCGCAGGCCGCGCTCGACTG
GTGGCGCGAACGATTGCCGGCTGCCCGGTTGGAGTTTGACCTCTCCGTGCGGGTTGTACCAACACGATATGAGCCAATTC
GCTATGGACTGGCGCAGGAGGGTCTCTGGATTAGTGATGTCTTAGGTGAGTTAGGTTATATCAGCGCAAACTATTTCGAG
CAGGCATACATGGCCTTGTTCGATGTGCGTGAACAGCGTGGCACTGACTGGGCAGCAATCTTCTTCATCGTCAACAGCGC
AAACGACGATGGCTACTTTGCCGATGGCCGCTTTGCCTATGCTTACCTGAACGGCCCGTTCAGCGTCATTACCTCCGATG
GTGGGCCATATCAAACACATTGGCTCCGCTCGGTTATCGCTCACGAATTTGCCCATCTCTTCGGTGCGCTCGATCAGTAC
AGTGTTGCCGGGGTTAGCTGTGATCAACGCAGTGGCTACCTGTTTACCCCAACCACGAACAGTATGTTCAACAATTGTGG
CACCAATGAGCCAAGCATCATGCGCGAATTGATCAACAGCTTTGTCACCGGTGCAGTTGACACCTCGGCCCGGCATCAAC
TCGGTTATCGCGACAGCGACGACGATGGCGTGATTGATGTGCTTGATACGACACCTGCGCTTTCGCTAACGGTCAATCTC
CAGGCGGTCAGCCAGCGACCGGTTGTTGAACTGACAGCCCGTGATCTGCCATACCCTTCACCGGTCCAACCTGATGCAAG
CGTTAATCAAATTACGGCCATTGAGTATCGGGTTGGCGATGGCGAATGGCAGTTGGTATTGCCGACCGATGGGAGCTTCG
ATAGCCGCCGCGAAACAGCGCAGATCGAGTTGCCGTTGTACGATGGAACGTATGAGGTTGAGTTTCGTACGTTTAATACG
GCGGGTAATGCCGCAACCCCGATCACGCAGACCTTTACTGTCAGCGGATTAGGGCCGATGCCCGACTATCACATTCCGGC
TCCCGCTCAACTTGATGATACAACGCTGATGATCCAATTGCAAGCACCGGCGGACACTCAAGCCATTGAATTGAGCATTG
CCCGTGATTTTCACAATGCACTCCGATTGCCGTATCAACCAACCCTGGTACTGCCGCTAAGCAGCGAATTGTCACTCATG
ACAGTGACGACAACAACGACGACGCCAGCGATGTATGTACGTTTTGTTGATAGTGCCGGTCGCCTCTCGCTGGCCTACAC
TCTCCCCGTCGAGATTCCGTCACCGTCCTATCATCAGGTGATGGTACCGCTGGTATTACGCTAA

Upstream 100 bases:

>100_bases
GGGACTCTTTCGCCCCTGGGCATATACCCCTTTCCGATGTACCTTGACATTGAGAGAACGGCTTTGCTCTTCATTCTCAT
CCTAGCCAGGCGAGGCCGCT

Downstream 100 bases:

>100_bases
ACCGAAAACACACTCTCCGCCTGGTTAAGTACTGGGAGAGGGAACACTACCGTCCCTCTCCCGATTTGCATGTGTAGTTT
GCTCTGGACAAATCCCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MRTRFLFSLLFCLLVAPLTALYAAPGPQPELPLPAGDALIAPPPATLSFAVDDDQLSPRLPSQYLAGRVAVQLILPESTG
SFDPSTEDWNAAQVDQIVNEAQAALDWWRERLPAARLEFDLSVRVVPTRYEPIRYGLAQEGLWISDVLGELGYISANYFE
QAYMALFDVREQRGTDWAAIFFIVNSANDDGYFADGRFAYAYLNGPFSVITSDGGPYQTHWLRSVIAHEFAHLFGALDQY
SVAGVSCDQRSGYLFTPTTNSMFNNCGTNEPSIMRELINSFVTGAVDTSARHQLGYRDSDDDGVIDVLDTTPALSLTVNL
QAVSQRPVVELTARDLPYPSPVQPDASVNQITAIEYRVGDGEWQLVLPTDGSFDSRRETAQIELPLYDGTYEVEFRTFNT
AGNAATPITQTFTVSGLGPMPDYHIPAPAQLDDTTLMIQLQAPADTQAIELSIARDFHNALRLPYQPTLVLPLSSELSLM
TVTTTTTTPAMYVRFVDSAGRLSLAYTLPVEIPSPSYHQVMVPLVLR

Sequences:

>Translated_527_residues
MRTRFLFSLLFCLLVAPLTALYAAPGPQPELPLPAGDALIAPPPATLSFAVDDDQLSPRLPSQYLAGRVAVQLILPESTG
SFDPSTEDWNAAQVDQIVNEAQAALDWWRERLPAARLEFDLSVRVVPTRYEPIRYGLAQEGLWISDVLGELGYISANYFE
QAYMALFDVREQRGTDWAAIFFIVNSANDDGYFADGRFAYAYLNGPFSVITSDGGPYQTHWLRSVIAHEFAHLFGALDQY
SVAGVSCDQRSGYLFTPTTNSMFNNCGTNEPSIMRELINSFVTGAVDTSARHQLGYRDSDDDGVIDVLDTTPALSLTVNL
QAVSQRPVVELTARDLPYPSPVQPDASVNQITAIEYRVGDGEWQLVLPTDGSFDSRRETAQIELPLYDGTYEVEFRTFNT
AGNAATPITQTFTVSGLGPMPDYHIPAPAQLDDTTLMIQLQAPADTQAIELSIARDFHNALRLPYQPTLVLPLSSELSLM
TVTTTTTTPAMYVRFVDSAGRLSLAYTLPVEIPSPSYHQVMVPLVLR
>Mature_527_residues
MRTRFLFSLLFCLLVAPLTALYAAPGPQPELPLPAGDALIAPPPATLSFAVDDDQLSPRLPSQYLAGRVAVQLILPESTG
SFDPSTEDWNAAQVDQIVNEAQAALDWWRERLPAARLEFDLSVRVVPTRYEPIRYGLAQEGLWISDVLGELGYISANYFE
QAYMALFDVREQRGTDWAAIFFIVNSANDDGYFADGRFAYAYLNGPFSVITSDGGPYQTHWLRSVIAHEFAHLFGALDQY
SVAGVSCDQRSGYLFTPTTNSMFNNCGTNEPSIMRELINSFVTGAVDTSARHQLGYRDSDDDGVIDVLDTTPALSLTVNL
QAVSQRPVVELTARDLPYPSPVQPDASVNQITAIEYRVGDGEWQLVLPTDGSFDSRRETAQIELPLYDGTYEVEFRTFNT
AGNAATPITQTFTVSGLGPMPDYHIPAPAQLDDTTLMIQLQAPADTQAIELSIARDFHNALRLPYQPTLVLPLSSELSLM
TVTTTTTTPAMYVRFVDSAGRLSLAYTLPVEIPSPSYHQVMVPLVLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58030; Mature: 58030

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRFLFSLLFCLLVAPLTALYAAPGPQPELPLPAGDALIAPPPATLSFAVDDDQLSPRL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCC
PSQYLAGRVAVQLILPESTGSFDPSTEDWNAAQVDQIVNEAQAALDWWRERLPAARLEFD
CHHHHCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEE
LSVRVVPTRYEPIRYGLAQEGLWISDVLGELGYISANYFEQAYMALFDVREQRGTDWAAI
EEEEEEECCCCHHHCCHHHCCCCHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCCCCEEEE
FFIVNSANDDGYFADGRFAYAYLNGPFSVITSDGGPYQTHWLRSVIAHEFAHLFGALDQY
EEEEECCCCCCEEECCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHCC
SVAGVSCDQRSGYLFTPTTNSMFNNCGTNEPSIMRELINSFVTGAVDTSARHQLGYRDSD
EEECCCCCCCCCEEECCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCC
DDGVIDVLDTTPALSLTVNLQAVSQRPVVELTARDLPYPSPVQPDASVNQITAIEYRVGD
CCCEEEEECCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECC
GEWQLVLPTDGSFDSRRETAQIELPLYDGTYEVEFRTFNTAGNAATPITQTFTVSGLGPM
CCEEEEEECCCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCCCCCCEEEEEECCCCCC
PDYHIPAPAQLDDTTLMIQLQAPADTQAIELSIARDFHNALRLPYQPTLVLPLSSELSLM
CCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEE
TVTTTTTTPAMYVRFVDSAGRLSLAYTLPVEIPSPSYHQVMVPLVLR
EEEECCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCEEEEEEECC
>Mature Secondary Structure
MRTRFLFSLLFCLLVAPLTALYAAPGPQPELPLPAGDALIAPPPATLSFAVDDDQLSPRL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCC
PSQYLAGRVAVQLILPESTGSFDPSTEDWNAAQVDQIVNEAQAALDWWRERLPAARLEFD
CHHHHCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEE
LSVRVVPTRYEPIRYGLAQEGLWISDVLGELGYISANYFEQAYMALFDVREQRGTDWAAI
EEEEEEECCCCHHHCCHHHCCCCHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCCCCEEEE
FFIVNSANDDGYFADGRFAYAYLNGPFSVITSDGGPYQTHWLRSVIAHEFAHLFGALDQY
EEEEECCCCCCEEECCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHCC
SVAGVSCDQRSGYLFTPTTNSMFNNCGTNEPSIMRELINSFVTGAVDTSARHQLGYRDSD
EEECCCCCCCCCEEECCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCC
DDGVIDVLDTTPALSLTVNLQAVSQRPVVELTARDLPYPSPVQPDASVNQITAIEYRVGD
CCCEEEEECCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECC
GEWQLVLPTDGSFDSRRETAQIELPLYDGTYEVEFRTFNTAGNAATPITQTFTVSGLGPM
CCEEEEEECCCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCCCCCCEEEEEECCCCCC
PDYHIPAPAQLDDTTLMIQLQAPADTQAIELSIARDFHNALRLPYQPTLVLPLSSELSLM
CCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEE
TVTTTTTTPAMYVRFVDSAGRLSLAYTLPVEIPSPSYHQVMVPLVLR
EEEECCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA