| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222527040
Identifier: 222527040
GI number: 222527040
Start: 4759359
End: 4760942
Strand: Reverse
Name: 222527040
Synonym: Chy400_3819
Alternate gene names: NA
Gene position: 4760942-4759359 (Counterclockwise)
Preceding gene: 222527044
Following gene: 222527039
Centisome position: 90.36
GC content: 54.1
Gene sequence:
>1584_bases ATGCGTACCAGATTTCTATTCAGCCTTCTATTCTGCCTGTTGGTAGCGCCACTGACTGCACTTTACGCAGCTCCTGGCCC TCAGCCAGAATTACCATTACCTGCAGGTGATGCGCTGATAGCTCCGCCACCGGCTACCCTATCATTTGCGGTGGACGATG ACCAACTCTCGCCTCGTTTGCCGAGTCAGTATCTGGCCGGACGGGTTGCTGTTCAGCTTATCTTGCCGGAAAGCACCGGT TCCTTCGATCCTTCCACCGAAGACTGGAACGCTGCGCAAGTAGATCAGATTGTGAATGAGGCGCAGGCCGCGCTCGACTG GTGGCGCGAACGATTGCCGGCTGCCCGGTTGGAGTTTGACCTCTCCGTGCGGGTTGTACCAACACGATATGAGCCAATTC GCTATGGACTGGCGCAGGAGGGTCTCTGGATTAGTGATGTCTTAGGTGAGTTAGGTTATATCAGCGCAAACTATTTCGAG CAGGCATACATGGCCTTGTTCGATGTGCGTGAACAGCGTGGCACTGACTGGGCAGCAATCTTCTTCATCGTCAACAGCGC AAACGACGATGGCTACTTTGCCGATGGCCGCTTTGCCTATGCTTACCTGAACGGCCCGTTCAGCGTCATTACCTCCGATG GTGGGCCATATCAAACACATTGGCTCCGCTCGGTTATCGCTCACGAATTTGCCCATCTCTTCGGTGCGCTCGATCAGTAC AGTGTTGCCGGGGTTAGCTGTGATCAACGCAGTGGCTACCTGTTTACCCCAACCACGAACAGTATGTTCAACAATTGTGG CACCAATGAGCCAAGCATCATGCGCGAATTGATCAACAGCTTTGTCACCGGTGCAGTTGACACCTCGGCCCGGCATCAAC TCGGTTATCGCGACAGCGACGACGATGGCGTGATTGATGTGCTTGATACGACACCTGCGCTTTCGCTAACGGTCAATCTC CAGGCGGTCAGCCAGCGACCGGTTGTTGAACTGACAGCCCGTGATCTGCCATACCCTTCACCGGTCCAACCTGATGCAAG CGTTAATCAAATTACGGCCATTGAGTATCGGGTTGGCGATGGCGAATGGCAGTTGGTATTGCCGACCGATGGGAGCTTCG ATAGCCGCCGCGAAACAGCGCAGATCGAGTTGCCGTTGTACGATGGAACGTATGAGGTTGAGTTTCGTACGTTTAATACG GCGGGTAATGCCGCAACCCCGATCACGCAGACCTTTACTGTCAGCGGATTAGGGCCGATGCCCGACTATCACATTCCGGC TCCCGCTCAACTTGATGATACAACGCTGATGATCCAATTGCAAGCACCGGCGGACACTCAAGCCATTGAATTGAGCATTG CCCGTGATTTTCACAATGCACTCCGATTGCCGTATCAACCAACCCTGGTACTGCCGCTAAGCAGCGAATTGTCACTCATG ACAGTGACGACAACAACGACGACGCCAGCGATGTATGTACGTTTTGTTGATAGTGCCGGTCGCCTCTCGCTGGCCTACAC TCTCCCCGTCGAGATTCCGTCACCGTCCTATCATCAGGTGATGGTACCGCTGGTATTACGCTAA
Upstream 100 bases:
>100_bases GGGACTCTTTCGCCCCTGGGCATATACCCCTTTCCGATGTACCTTGACATTGAGAGAACGGCTTTGCTCTTCATTCTCAT CCTAGCCAGGCGAGGCCGCT
Downstream 100 bases:
>100_bases ACCGAAAACACACTCTCCGCCTGGTTAAGTACTGGGAGAGGGAACACTACCGTCCCTCTCCCGATTTGCATGTGTAGTTT GCTCTGGACAAATCCCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MRTRFLFSLLFCLLVAPLTALYAAPGPQPELPLPAGDALIAPPPATLSFAVDDDQLSPRLPSQYLAGRVAVQLILPESTG SFDPSTEDWNAAQVDQIVNEAQAALDWWRERLPAARLEFDLSVRVVPTRYEPIRYGLAQEGLWISDVLGELGYISANYFE QAYMALFDVREQRGTDWAAIFFIVNSANDDGYFADGRFAYAYLNGPFSVITSDGGPYQTHWLRSVIAHEFAHLFGALDQY SVAGVSCDQRSGYLFTPTTNSMFNNCGTNEPSIMRELINSFVTGAVDTSARHQLGYRDSDDDGVIDVLDTTPALSLTVNL QAVSQRPVVELTARDLPYPSPVQPDASVNQITAIEYRVGDGEWQLVLPTDGSFDSRRETAQIELPLYDGTYEVEFRTFNT AGNAATPITQTFTVSGLGPMPDYHIPAPAQLDDTTLMIQLQAPADTQAIELSIARDFHNALRLPYQPTLVLPLSSELSLM TVTTTTTTPAMYVRFVDSAGRLSLAYTLPVEIPSPSYHQVMVPLVLR
Sequences:
>Translated_527_residues MRTRFLFSLLFCLLVAPLTALYAAPGPQPELPLPAGDALIAPPPATLSFAVDDDQLSPRLPSQYLAGRVAVQLILPESTG SFDPSTEDWNAAQVDQIVNEAQAALDWWRERLPAARLEFDLSVRVVPTRYEPIRYGLAQEGLWISDVLGELGYISANYFE QAYMALFDVREQRGTDWAAIFFIVNSANDDGYFADGRFAYAYLNGPFSVITSDGGPYQTHWLRSVIAHEFAHLFGALDQY SVAGVSCDQRSGYLFTPTTNSMFNNCGTNEPSIMRELINSFVTGAVDTSARHQLGYRDSDDDGVIDVLDTTPALSLTVNL QAVSQRPVVELTARDLPYPSPVQPDASVNQITAIEYRVGDGEWQLVLPTDGSFDSRRETAQIELPLYDGTYEVEFRTFNT AGNAATPITQTFTVSGLGPMPDYHIPAPAQLDDTTLMIQLQAPADTQAIELSIARDFHNALRLPYQPTLVLPLSSELSLM TVTTTTTTPAMYVRFVDSAGRLSLAYTLPVEIPSPSYHQVMVPLVLR >Mature_527_residues MRTRFLFSLLFCLLVAPLTALYAAPGPQPELPLPAGDALIAPPPATLSFAVDDDQLSPRLPSQYLAGRVAVQLILPESTG SFDPSTEDWNAAQVDQIVNEAQAALDWWRERLPAARLEFDLSVRVVPTRYEPIRYGLAQEGLWISDVLGELGYISANYFE QAYMALFDVREQRGTDWAAIFFIVNSANDDGYFADGRFAYAYLNGPFSVITSDGGPYQTHWLRSVIAHEFAHLFGALDQY SVAGVSCDQRSGYLFTPTTNSMFNNCGTNEPSIMRELINSFVTGAVDTSARHQLGYRDSDDDGVIDVLDTTPALSLTVNL QAVSQRPVVELTARDLPYPSPVQPDASVNQITAIEYRVGDGEWQLVLPTDGSFDSRRETAQIELPLYDGTYEVEFRTFNT AGNAATPITQTFTVSGLGPMPDYHIPAPAQLDDTTLMIQLQAPADTQAIELSIARDFHNALRLPYQPTLVLPLSSELSLM TVTTTTTTPAMYVRFVDSAGRLSLAYTLPVEIPSPSYHQVMVPLVLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58030; Mature: 58030
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRFLFSLLFCLLVAPLTALYAAPGPQPELPLPAGDALIAPPPATLSFAVDDDQLSPRL CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCC PSQYLAGRVAVQLILPESTGSFDPSTEDWNAAQVDQIVNEAQAALDWWRERLPAARLEFD CHHHHCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEE LSVRVVPTRYEPIRYGLAQEGLWISDVLGELGYISANYFEQAYMALFDVREQRGTDWAAI EEEEEEECCCCHHHCCHHHCCCCHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCCCCEEEE FFIVNSANDDGYFADGRFAYAYLNGPFSVITSDGGPYQTHWLRSVIAHEFAHLFGALDQY EEEEECCCCCCEEECCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHCC SVAGVSCDQRSGYLFTPTTNSMFNNCGTNEPSIMRELINSFVTGAVDTSARHQLGYRDSD EEECCCCCCCCCEEECCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCC DDGVIDVLDTTPALSLTVNLQAVSQRPVVELTARDLPYPSPVQPDASVNQITAIEYRVGD CCCEEEEECCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECC GEWQLVLPTDGSFDSRRETAQIELPLYDGTYEVEFRTFNTAGNAATPITQTFTVSGLGPM CCEEEEEECCCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCCCCCCEEEEEECCCCCC PDYHIPAPAQLDDTTLMIQLQAPADTQAIELSIARDFHNALRLPYQPTLVLPLSSELSLM CCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEE TVTTTTTTPAMYVRFVDSAGRLSLAYTLPVEIPSPSYHQVMVPLVLR EEEECCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCEEEEEEECC >Mature Secondary Structure MRTRFLFSLLFCLLVAPLTALYAAPGPQPELPLPAGDALIAPPPATLSFAVDDDQLSPRL CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCC PSQYLAGRVAVQLILPESTGSFDPSTEDWNAAQVDQIVNEAQAALDWWRERLPAARLEFD CHHHHCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEE LSVRVVPTRYEPIRYGLAQEGLWISDVLGELGYISANYFEQAYMALFDVREQRGTDWAAI EEEEEEECCCCHHHCCHHHCCCCHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCCCCEEEE FFIVNSANDDGYFADGRFAYAYLNGPFSVITSDGGPYQTHWLRSVIAHEFAHLFGALDQY EEEEECCCCCCEEECCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCHHCC SVAGVSCDQRSGYLFTPTTNSMFNNCGTNEPSIMRELINSFVTGAVDTSARHQLGYRDSD EEECCCCCCCCCEEECCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCC DDGVIDVLDTTPALSLTVNLQAVSQRPVVELTARDLPYPSPVQPDASVNQITAIEYRVGD CCCEEEEECCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECC GEWQLVLPTDGSFDSRRETAQIELPLYDGTYEVEFRTFNTAGNAATPITQTFTVSGLGPM CCEEEEEECCCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCCCCCCEEEEEECCCCCC PDYHIPAPAQLDDTTLMIQLQAPADTQAIELSIARDFHNALRLPYQPTLVLPLSSELSLM CCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEE TVTTTTTTPAMYVRFVDSAGRLSLAYTLPVEIPSPSYHQVMVPLVLR EEEECCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA