| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is mshA [H]
Identifier: 222526927
GI number: 222526927
Start: 4621314
End: 4622435
Strand: Direct
Name: mshA [H]
Synonym: Chy400_3705
Alternate gene names: 222526927
Gene position: 4621314-4622435 (Clockwise)
Preceding gene: 222526926
Following gene: 222526928
Centisome position: 87.71
GC content: 61.85
Gene sequence:
>1122_bases ATGCGCATCGCCCTCTACAACCTGACCACCACCACCAAAATCGGTGGGGTAGAGAGTTTTGTCTGGGACCTGGCTCGTGA ACTGGCCCAGCGCGGTCATGCGGTTGATATTTTGGGTGGGGTCGGGAATCGACGCGAAACGGCACCGGGAGTACGTGTGC TTACCTTCCCATTTATTTCGCGTCGCTTCTGGCAGGCGTTCCCGCTGCTGCGCCGGGCTTATGCCGAAGCAAAGCTGCTG GAGCGGCTGACGATGGCGGTTGCCGCACTCCCCACCCTGGTGCGCGAGAAGTATCAGATTATCCATCTGCAAAAACCGTA TGATCTGGCACCGGCGCTACTGGCACGCCGGCTTAGCGGAGCGCGCGTCATCCTTGGTTGCCACGGTGAAGACTTTTACC GTGGCGATACCTGGCTGGCACGGCGAGTGGACGCTGCGGTCTCGTGTTCGCGTTTCAATGCGCAGACGATTGCCGGTCGC TACGGCTTCATGCCGGAGGTGGTTTTCAACGGGATTGATACCAGTCTGTTCCGTCCACAGCCACCTGATCCAACTCTGCG CGAACGGCTTGGCGTGTCGTCGACCGTGCCCCTGCTCCTCTTTGTTGGTCGGCTCCAACCGTGGAAAGGGGTAGAGACGG CAATTCGGGCACTCTGTCACATCGATCAGGCAATCCTGGTCATTGCCGGTGATGGCGAAGATCGGCCACGGTTGGCGGCG ATTGCGCGTGAACTCGGAGTGAGTGAACGGGTTCGCTTTCTGGGGAGTGTGCCGCGCCAGCATCTGCCGGCGCTCTACGC TACTGTCGATCTGCTGCTGGCAACCAGCTATGCCAGCGAAACGTTTGGCATTGGGCCGGTCGAAGCGCAGGCGTGCGGAT TACCGGTTGTAGCAACCCGTTTCGGAGGCTTTCCCGAAGTCGTCGCCGAGGGTCAGACCGGGCTACTGGTACCGCCTCGC GATCCGGCGGCGCTGGCTGCGGCTGTCAATAGTCTGCTCTCCGATCCGGCACGTCGGGCAGCGCTGGCCGCGGCTGCGCC GGCGTGGGCAGCCCAGTTTGCCTGGCCGGCGGTAGTGGATCGGATCGAGGCGGTCTATCGGGCTGTCCTGCAAACTAACT GA
Upstream 100 bases:
>100_bases AACGGAACGCCGGCAACGGTGGCGGCTGGCCATCTATCTGGGTTTGACCCTGGCCTTGTTTGTGGTGATGAAATTGACGC TCTACACCATCTGGTAAGGT
Downstream 100 bases:
>100_bases CGGTACGGTTTACCGGTTATCGTTACTCTACAACAACGTGTGACAAGCCATGCGCATTTTGATCATTGGACTTGGCGGTA TCAGTCGTCATTTTCGTAAC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase; GlcNAc-Ins-P N-acetylglucosaminyltransferase [H]
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MRIALYNLTTTTKIGGVESFVWDLARELAQRGHAVDILGGVGNRRETAPGVRVLTFPFISRRFWQAFPLLRRAYAEAKLL ERLTMAVAALPTLVREKYQIIHLQKPYDLAPALLARRLSGARVILGCHGEDFYRGDTWLARRVDAAVSCSRFNAQTIAGR YGFMPEVVFNGIDTSLFRPQPPDPTLRERLGVSSTVPLLLFVGRLQPWKGVETAIRALCHIDQAILVIAGDGEDRPRLAA IARELGVSERVRFLGSVPRQHLPALYATVDLLLATSYASETFGIGPVEAQACGLPVVATRFGGFPEVVAEGQTGLLVPPR DPAALAAAVNSLLSDPARRAALAAAAPAWAAQFAWPAVVDRIEAVYRAVLQTN
Sequences:
>Translated_373_residues MRIALYNLTTTTKIGGVESFVWDLARELAQRGHAVDILGGVGNRRETAPGVRVLTFPFISRRFWQAFPLLRRAYAEAKLL ERLTMAVAALPTLVREKYQIIHLQKPYDLAPALLARRLSGARVILGCHGEDFYRGDTWLARRVDAAVSCSRFNAQTIAGR YGFMPEVVFNGIDTSLFRPQPPDPTLRERLGVSSTVPLLLFVGRLQPWKGVETAIRALCHIDQAILVIAGDGEDRPRLAA IARELGVSERVRFLGSVPRQHLPALYATVDLLLATSYASETFGIGPVEAQACGLPVVATRFGGFPEVVAEGQTGLLVPPR DPAALAAAVNSLLSDPARRAALAAAAPAWAAQFAWPAVVDRIEAVYRAVLQTN >Mature_373_residues MRIALYNLTTTTKIGGVESFVWDLARELAQRGHAVDILGGVGNRRETAPGVRVLTFPFISRRFWQAFPLLRRAYAEAKLL ERLTMAVAALPTLVREKYQIIHLQKPYDLAPALLARRLSGARVILGCHGEDFYRGDTWLARRVDAAVSCSRFNAQTIAGR YGFMPEVVFNGIDTSLFRPQPPDPTLRERLGVSSTVPLLLFVGRLQPWKGVETAIRALCHIDQAILVIAGDGEDRPRLAA IARELGVSERVRFLGSVPRQHLPALYATVDLLLATSYASETFGIGPVEAQACGLPVVATRFGGFPEVVAEGQTGLLVPPR DPAALAAAVNSLLSDPARRAALAAAAPAWAAQFAWPAVVDRIEAVYRAVLQTN
Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily [H]
Homologues:
Organism=Homo sapiens, GI11863130, Length=388, Percent_Identity=25.5154639175258, Blast_Score=85, Evalue=1e-16, Organism=Escherichia coli, GI1790061, Length=219, Percent_Identity=28.310502283105, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17532709, Length=392, Percent_Identity=29.0816326530612, Blast_Score=103, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI9755344, Length=393, Percent_Identity=24.1730279898219, Blast_Score=89, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR017814 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.250 [H]
Molecular weight: Translated: 40622; Mature: 40622
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIALYNLTTTTKIGGVESFVWDLARELAQRGHAVDILGGVGNRRETAPGVRVLTFPFIS CEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEHHHHH RRFWQAFPLLRRAYAEAKLLERLTMAVAALPTLVREKYQIIHLQKPYDLAPALLARRLSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCC ARVILGCHGEDFYRGDTWLARRVDAAVSCSRFNAQTIAGRYGFMPEVVFNGIDTSLFRPQ CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCCCCCCCC PPDPTLRERLGVSSTVPLLLFVGRLQPWKGVETAIRALCHIDQAILVIAGDGEDRPRLAA CCCHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHH IARELGVSERVRFLGSVPRQHLPALYATVDLLLATSYASETFGIGPVEAQACGLPVVATR HHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHH FGGFPEVVAEGQTGLLVPPRDPAALAAAVNSLLSDPARRAALAAAAPAWAAQFAWPAVVD CCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHH RIEAVYRAVLQTN HHHHHHHHHHHCC >Mature Secondary Structure MRIALYNLTTTTKIGGVESFVWDLARELAQRGHAVDILGGVGNRRETAPGVRVLTFPFIS CEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEHHHHH RRFWQAFPLLRRAYAEAKLLERLTMAVAALPTLVREKYQIIHLQKPYDLAPALLARRLSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCC ARVILGCHGEDFYRGDTWLARRVDAAVSCSRFNAQTIAGRYGFMPEVVFNGIDTSLFRPQ CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHCCCCCCCCCCC PPDPTLRERLGVSSTVPLLLFVGRLQPWKGVETAIRALCHIDQAILVIAGDGEDRPRLAA CCCHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHH IARELGVSERVRFLGSVPRQHLPALYATVDLLLATSYASETFGIGPVEAQACGLPVVATR HHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHH FGGFPEVVAEGQTGLLVPPRDPAALAAAVNSLLSDPARRAALAAAAPAWAAQFAWPAVVD CCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHH RIEAVYRAVLQTN HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA