| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is accA [C]
Identifier: 222526534
GI number: 222526534
Start: 4112558
End: 4114135
Strand: Reverse
Name: accA [C]
Synonym: Chy400_3301
Alternate gene names: 222526534
Gene position: 4114135-4112558 (Counterclockwise)
Preceding gene: 222526546
Following gene: 222526533
Centisome position: 78.08
GC content: 59.19
Gene sequence:
>1578_bases ATGACTCAACAAGAGCTGGCCCGACAAGCACCGCCAACGATGCGTGCTCGCATTGAATCCCTGCGCCAGTACCGGCAGCG CCTGGAACAGGGCGGTGGCCCAGACCGTATCGCACGCCAGCATCAAGCCGGTAAACTGACTGCCCGCGAACGTATTCACC TGCTGATTGAACCGGAAACGTTTCAGGAACTCTTCCTCTTTGCCCGTCACCGCTGTACCGCCTTTGGCATGGCCGACAAG GAGATACCGGCTGAAGGCGTCATCACCGGTTGTGGCAGTGTTGATGGCCGCCAGGTCTTTGTTGCCGCTCAGGACTTTAC CGTTGCCGGCGGCTCGGTCGGCGAGATGCACGCCGATAAGATCTGTCAGACGATGGATCTCGCGTTCAAATGCGGTTCGC CGTTTATCACCATCAACGATAGCGGCGGTGCTCGCATCCAGGAGGGCATTGATGCCCTCAGTGGCTATGGTCGCATCTTC TACCGCAACGTCCTGCTCTCCGGAGTAGTACCCCAAATCGCCATTATCGCCGGGCCATGCGCGGGCGGTGCCGCCTATTC GCCGGCTTTGATGGACTTCATCATCATGGTGCGGGGCAGCGAGATGTTCATCACCGGCCCGGAAGTACTCAAACAAGTGA CCGGCGAACACGTCACCGGTGACGAACTCGGCGGCCCTGAAGCTCAAGTACGTAGCGGCGTTGCCCATTTCATTGCTGAG AACGATGTGGAAGCAATTGCAATCTGCAAGCGACTGCTGAGTTTCCTACCGGCGAACAACCTCGAAGACCCACCTGATCG CGGTGACGGCGAACTGCGCCTGTTCAACGATCCGGTGCTCGACACCATCATCCCCGCTGATCCACGTGAACCATACGATG TCATACCCATCATCAAGCGGATCGTTGATGATGGGGACTTTCTCGAAGTCCAGCGTGGCTTCGCCGACAACGCCGTAATC GGGTTTGCCCGCATCGACGGCAGTACCGTTGGAATTGTTGCCAATCAGCCGATGGTGATGGCAGGAGTACTCGATATTGA CGCTTCGGATAAGATAGCGCGTTTTGTCCGTTTTTGCAACGCCTTCAACATTCCACTCATCACATTTATTGACGTCCCAG GCTTCCTGCCCGGCGTTGCCCAGGAACGCGGCGGCATCATTCGGCACGGCGCGAAGATGCTCTTCGCCTACTCCGCCGCA ACCACACCGAAAATATCAATCATCCTGCGCAAAGCCTACGGCGGCGCCTACCTGGCCATGTGCGGCAAAGACCTGGGGGC GGATCGGGTAGCCGCCTGGCCAGGCGCCGAAATCGCGGTCATGGGGCCAGAGGGCGCGGTTAACATCATCTACCGCGACC AGATCAAGCAGGCGGACGACCCGGCTGCGGCGCGTGCCGAATTTGTACGCCAGTACCGGGCTGAGTTTGCCTCACCCTAC GTCGGTGCCGGTCGCAACCTTATCGATAGCATCATTGCCCCCAGCGAAACCCGCCGCTACCTCAGCCTGGCCCTGGCCTC GCTGCGCACCAAACGTGAGTTCCGTCCGCAAAAGAAGCACGGCCTGGTTCCGCTCTAA
Upstream 100 bases:
>100_bases TTCTGTACATCCCCCACAGCGCTCAACCCTGACACCGATGTTCACTCCCTGCATAGACAGCGCCAGGCGAGTGAAGCAAT GAATCCAAGGGAGGGTTGCG
Downstream 100 bases:
>100_bases ATCTCAAAGGAGAGTCTATGGTCGATCCTGGCGCTAATCCGCTCCTGACCGGCTTGCAGATCGCGATTACCGGTATAAGC ATCGTCTTCATCGTGTTAAT
Product: carboxyl transferase
Products: NA
Alternate protein names: Transcarboxylase 12S subunit [H]
Number of amino acids: Translated: 525; Mature: 524
Protein sequence:
>525_residues MTQQELARQAPPTMRARIESLRQYRQRLEQGGGPDRIARQHQAGKLTARERIHLLIEPETFQELFLFARHRCTAFGMADK EIPAEGVITGCGSVDGRQVFVAAQDFTVAGGSVGEMHADKICQTMDLAFKCGSPFITINDSGGARIQEGIDALSGYGRIF YRNVLLSGVVPQIAIIAGPCAGGAAYSPALMDFIIMVRGSEMFITGPEVLKQVTGEHVTGDELGGPEAQVRSGVAHFIAE NDVEAIAICKRLLSFLPANNLEDPPDRGDGELRLFNDPVLDTIIPADPREPYDVIPIIKRIVDDGDFLEVQRGFADNAVI GFARIDGSTVGIVANQPMVMAGVLDIDASDKIARFVRFCNAFNIPLITFIDVPGFLPGVAQERGGIIRHGAKMLFAYSAA TTPKISIILRKAYGGAYLAMCGKDLGADRVAAWPGAEIAVMGPEGAVNIIYRDQIKQADDPAAARAEFVRQYRAEFASPY VGAGRNLIDSIIAPSETRRYLSLALASLRTKREFRPQKKHGLVPL
Sequences:
>Translated_525_residues MTQQELARQAPPTMRARIESLRQYRQRLEQGGGPDRIARQHQAGKLTARERIHLLIEPETFQELFLFARHRCTAFGMADK EIPAEGVITGCGSVDGRQVFVAAQDFTVAGGSVGEMHADKICQTMDLAFKCGSPFITINDSGGARIQEGIDALSGYGRIF YRNVLLSGVVPQIAIIAGPCAGGAAYSPALMDFIIMVRGSEMFITGPEVLKQVTGEHVTGDELGGPEAQVRSGVAHFIAE NDVEAIAICKRLLSFLPANNLEDPPDRGDGELRLFNDPVLDTIIPADPREPYDVIPIIKRIVDDGDFLEVQRGFADNAVI GFARIDGSTVGIVANQPMVMAGVLDIDASDKIARFVRFCNAFNIPLITFIDVPGFLPGVAQERGGIIRHGAKMLFAYSAA TTPKISIILRKAYGGAYLAMCGKDLGADRVAAWPGAEIAVMGPEGAVNIIYRDQIKQADDPAAARAEFVRQYRAEFASPY VGAGRNLIDSIIAPSETRRYLSLALASLRTKREFRPQKKHGLVPL >Mature_524_residues TQQELARQAPPTMRARIESLRQYRQRLEQGGGPDRIARQHQAGKLTARERIHLLIEPETFQELFLFARHRCTAFGMADKE IPAEGVITGCGSVDGRQVFVAAQDFTVAGGSVGEMHADKICQTMDLAFKCGSPFITINDSGGARIQEGIDALSGYGRIFY RNVLLSGVVPQIAIIAGPCAGGAAYSPALMDFIIMVRGSEMFITGPEVLKQVTGEHVTGDELGGPEAQVRSGVAHFIAEN DVEAIAICKRLLSFLPANNLEDPPDRGDGELRLFNDPVLDTIIPADPREPYDVIPIIKRIVDDGDFLEVQRGFADNAVIG FARIDGSTVGIVANQPMVMAGVLDIDASDKIARFVRFCNAFNIPLITFIDVPGFLPGVAQERGGIIRHGAKMLFAYSAAT TPKISIILRKAYGGAYLAMCGKDLGADRVAAWPGAEIAVMGPEGAVNIIYRDQIKQADDPAAARAEFVRQYRAEFASPYV GAGRNLIDSIIAPSETRRYLSLALASLRTKREFRPQKKHGLVPL
Specific function: The 12S subunit specifically catalyzes the transfer of the carboxyl group of methylmalonyl CoA to the biotin of the 1.3S subunit forming propanoyl-CoA and carboxylated 1.3S-biotin [H]
COG id: COG4799
COG function: function code I; Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 carboxyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI119943100, Length=513, Percent_Identity=52.046783625731, Blast_Score=507, Evalue=1e-143, Organism=Homo sapiens, GI295821216, Length=533, Percent_Identity=50.093808630394, Blast_Score=495, Evalue=1e-140, Organism=Homo sapiens, GI11545863, Length=518, Percent_Identity=33.7837837837838, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI134142062, Length=416, Percent_Identity=24.0384615384615, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI38679971, Length=402, Percent_Identity=23.8805970149254, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI38679974, Length=402, Percent_Identity=23.8805970149254, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI38679977, Length=402, Percent_Identity=23.8805970149254, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI38679967, Length=402, Percent_Identity=23.8805970149254, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI38679960, Length=402, Percent_Identity=23.8805970149254, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1786382, Length=189, Percent_Identity=28.5714285714286, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI25147362, Length=509, Percent_Identity=50.6876227897839, Blast_Score=507, Evalue=1e-144, Organism=Caenorhabditis elegans, GI25147359, Length=509, Percent_Identity=50.6876227897839, Blast_Score=506, Evalue=1e-144, Organism=Caenorhabditis elegans, GI17552936, Length=524, Percent_Identity=31.8702290076336, Blast_Score=251, Evalue=5e-67, Organism=Caenorhabditis elegans, GI71997163, Length=309, Percent_Identity=27.831715210356, Blast_Score=94, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6323863, Length=356, Percent_Identity=22.752808988764, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24586065, Length=525, Percent_Identity=33.1428571428571, Blast_Score=247, Evalue=1e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000438 - InterPro: IPR000022 - InterPro: IPR011763 - InterPro: IPR011762 [H]
Pfam domain/function: PF01039 Carboxyl_trans [H]
EC number: =2.1.3.1 [H]
Molecular weight: Translated: 56924; Mature: 56793
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS50980 COA_CT_NTER ; PS50989 COA_CT_CTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQELARQAPPTMRARIESLRQYRQRLEQGGGPDRIARQHQAGKLTARERIHLLIEPET CCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCHH FQELFLFARHRCTAFGMADKEIPAEGVITGCGSVDGRQVFVAAQDFTVAGGSVGEMHADK HHHHHHHHHHHHHEECCCCCCCCCCCEEECCCCCCCCEEEEEECCEEECCCCCCHHHHHH ICQTMDLAFKCGSPFITINDSGGARIQEGIDALSGYGRIFYRNVLLSGVVPQIAIIAGPC HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC AGGAAYSPALMDFIIMVRGSEMFITGPEVLKQVTGEHVTGDELGGPEAQVRSGVAHFIAE CCCCCCHHHHHHHHHHEECCEEEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHC NDVEAIAICKRLLSFLPANNLEDPPDRGDGELRLFNDPVLDTIIPADPREPYDVIPIIKR CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCCCHHHHHHHH IVDDGDFLEVQRGFADNAVIGFARIDGSTVGIVANQPMVMAGVLDIDASDKIARFVRFCN HHCCCCHHHHHHCCCCCCEEEEEEECCCEEEEEECCCEEEEEEEECCCHHHHHHHHHHHC AFNIPLITFIDVPGFLPGVAQERGGIIRHGAKMLFAYSAATTPKISIILRKAYGGAYLAM CCCCCEEEEECCCCCCCCHHHHCCCHHHHCCCEEEEECCCCCCEEEEEEEECCCCEEEEE CGKDLGADRVAAWPGAEIAVMGPEGAVNIIYRDQIKQADDPAAARAEFVRQYRAEFASPY CCCCCCCCCEECCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCC VGAGRNLIDSIIAPSETRRYLSLALASLRTKREFRPQKKHGLVPL CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC >Mature Secondary Structure TQQELARQAPPTMRARIESLRQYRQRLEQGGGPDRIARQHQAGKLTARERIHLLIEPET CHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCHH FQELFLFARHRCTAFGMADKEIPAEGVITGCGSVDGRQVFVAAQDFTVAGGSVGEMHADK HHHHHHHHHHHHHEECCCCCCCCCCCEEECCCCCCCCEEEEEECCEEECCCCCCHHHHHH ICQTMDLAFKCGSPFITINDSGGARIQEGIDALSGYGRIFYRNVLLSGVVPQIAIIAGPC HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC AGGAAYSPALMDFIIMVRGSEMFITGPEVLKQVTGEHVTGDELGGPEAQVRSGVAHFIAE CCCCCCHHHHHHHHHHEECCEEEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHC NDVEAIAICKRLLSFLPANNLEDPPDRGDGELRLFNDPVLDTIIPADPREPYDVIPIIKR CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCCCCHHHHHHHH IVDDGDFLEVQRGFADNAVIGFARIDGSTVGIVANQPMVMAGVLDIDASDKIARFVRFCN HHCCCCHHHHHHCCCCCCEEEEEEECCCEEEEEECCCEEEEEEEECCCHHHHHHHHHHHC AFNIPLITFIDVPGFLPGVAQERGGIIRHGAKMLFAYSAATTPKISIILRKAYGGAYLAM CCCCCEEEEECCCCCCCCHHHHCCCHHHHCCCEEEEECCCCCCEEEEEEEECCCCEEEEE CGKDLGADRVAAWPGAEIAVMGPEGAVNIIYRDQIKQADDPAAARAEFVRQYRAEFASPY CCCCCCCCCEECCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCC VGAGRNLIDSIIAPSETRRYLSLALASLRTKREFRPQKKHGLVPL CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8366018 [H]