| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526528
Identifier: 222526528
GI number: 222526528
Start: 4106352
End: 4107485
Strand: Reverse
Name: 222526528
Synonym: Chy400_3295
Alternate gene names: NA
Gene position: 4107485-4106352 (Counterclockwise)
Preceding gene: 222526529
Following gene: 222526527
Centisome position: 77.96
GC content: 57.23
Gene sequence:
>1134_bases ATGCTGTACGTACCCGATGGTGTACCGCCGGTTATCAAGAGCACGGTAGCTCGCCTTGATCGCACACTTCCCCAACCGGG GGAAATTCTGGTTAGACAGGGTGGTCGCGTCGAGCCTGACGATATTGTGGCTCGTGGTCAGAAGCACAATCCTCCATACA TGATTAACCTTGCGCAGGCACTGGCGTTACCACCCGATCAGGCCGCTCGTGCCGTCGTCGCACCGATAGGTCAGCCGGTA AATGCCGGTGCCGTCCTGGCGCGCCGGCGCGGCCTGCTGAGTCGCCGTGTCCTTAGCCCGGTTAATGGCATCCTCTACGC CGTCGATCCTGCAACCGGTTATGCAATTCTTCAGCCAGAACCACAGCAAATCACCGTAACAGCCGGCATTCGCGGTATTG TGATGGAAATCATCGATCAACAACGGGTAGTCATCGAAACCCCGGCAGCCCAAATCTTCGGGATCGCCAGCCTGGGAAAT GATTGTTACGGTGTCACCCGCCTGCTCACCCTTGATCCGGGCGAGCCAATCACCGAGGCGATGATTGATGCGCAAAGCAT GTATGCTGTGCTCATCGGGGGGAGCGGGATCAGTGCTGCTGCACTCCGCAAAGCGGTTGAAAATCAGGTTCGTGGCATCA TTATCGGTAGTATCAGCGAAAGTGTCCTGCGTGAGTTTTTCCAATGGACAAAGCGTCTGCCTTTTCTTCCCGGTCTGCGT AACTGGCAATGGGTTTCCCAGACTGACTCGCCACTGACAATTGTGTTGACCGAAGGGATAGGCAGTGCACCGATGGCAAA ACCGTTGTTTGAATTACTTGCCGGCAATGATCGGCGCGAAGTCTACATCGAGAGTAGTACCAGTCTTCGCCATCCACACC GTCGACCACGAGTCATCATCCCCCTGTCCCGAAGCAGCAACGCATCACTTGAACCACCGCGGCCACCATTACGGATCGGG GCCACGGTGCGACTGCTCGACCACGATCACCTTGGGCGGATCGGGCGTGTGCGTAGCCTGCCTGCTCTCCCACAACGCAT CCCTGCCGGTATACGCACCGCCGCCGTTGAAGTGTTGCTGGACAGCGGTGAAGCTATCTGGCTACCCAGAAGTTGTGTCG AGGTGATCGCGTAA
Upstream 100 bases:
>100_bases CGAGATGAACGCTGATAGTAAACTGTACCTTGCGTGTCTGCACTGCGAACATGGTATAATTGCGCAGAGTTAACACCCCT GCACCACACACGGAAACACT
Downstream 100 bases:
>100_bases ACAGTGGTAATCTTGCCTCTAAAATTTGCTTCAAGTTGTAGCTATTTCGAGTATACTAGTGAACAGTAGTAGATGGTTTC TACTTTGAGCGATAGTGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MLYVPDGVPPVIKSTVARLDRTLPQPGEILVRQGGRVEPDDIVARGQKHNPPYMINLAQALALPPDQAARAVVAPIGQPV NAGAVLARRRGLLSRRVLSPVNGILYAVDPATGYAILQPEPQQITVTAGIRGIVMEIIDQQRVVIETPAAQIFGIASLGN DCYGVTRLLTLDPGEPITEAMIDAQSMYAVLIGGSGISAAALRKAVENQVRGIIIGSISESVLREFFQWTKRLPFLPGLR NWQWVSQTDSPLTIVLTEGIGSAPMAKPLFELLAGNDRREVYIESSTSLRHPHRRPRVIIPLSRSSNASLEPPRPPLRIG ATVRLLDHDHLGRIGRVRSLPALPQRIPAGIRTAAVEVLLDSGEAIWLPRSCVEVIA
Sequences:
>Translated_377_residues MLYVPDGVPPVIKSTVARLDRTLPQPGEILVRQGGRVEPDDIVARGQKHNPPYMINLAQALALPPDQAARAVVAPIGQPV NAGAVLARRRGLLSRRVLSPVNGILYAVDPATGYAILQPEPQQITVTAGIRGIVMEIIDQQRVVIETPAAQIFGIASLGN DCYGVTRLLTLDPGEPITEAMIDAQSMYAVLIGGSGISAAALRKAVENQVRGIIIGSISESVLREFFQWTKRLPFLPGLR NWQWVSQTDSPLTIVLTEGIGSAPMAKPLFELLAGNDRREVYIESSTSLRHPHRRPRVIIPLSRSSNASLEPPRPPLRIG ATVRLLDHDHLGRIGRVRSLPALPQRIPAGIRTAAVEVLLDSGEAIWLPRSCVEVIA >Mature_377_residues MLYVPDGVPPVIKSTVARLDRTLPQPGEILVRQGGRVEPDDIVARGQKHNPPYMINLAQALALPPDQAARAVVAPIGQPV NAGAVLARRRGLLSRRVLSPVNGILYAVDPATGYAILQPEPQQITVTAGIRGIVMEIIDQQRVVIETPAAQIFGIASLGN DCYGVTRLLTLDPGEPITEAMIDAQSMYAVLIGGSGISAAALRKAVENQVRGIIIGSISESVLREFFQWTKRLPFLPGLR NWQWVSQTDSPLTIVLTEGIGSAPMAKPLFELLAGNDRREVYIESSTSLRHPHRRPRVIIPLSRSSNASLEPPRPPLRIG ATVRLLDHDHLGRIGRVRSLPALPQRIPAGIRTAAVEVLLDSGEAIWLPRSCVEVIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40818; Mature: 40818
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYVPDGVPPVIKSTVARLDRTLPQPGEILVRQGGRVEPDDIVARGQKHNPPYMINLAQA CEECCCCCCHHHHHHHHHHHHCCCCCCHHHEECCCCCCHHHHHHCCCCCCCCEEEEHHHH LALPPDQAARAVVAPIGQPVNAGAVLARRRGLLSRRVLSPVNGILYAVDPATGYAILQPE HCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCC PQQITVTAGIRGIVMEIIDQQRVVIETPAAQIFGIASLGNDCYGVTRLLTLDPGEPITEA CCEEEEECCHHHHHHHHHCCCCEEEECCHHHHEEHHHCCCCCEEEEEEEEECCCCHHHHH MIDAQSMYAVLIGGSGISAAALRKAVENQVRGIIIGSISESVLREFFQWTKRLPFLPGLR HHHHHHEEEEEECCCCCHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHHCCCCCCCCC NWQWVSQTDSPLTIVLTEGIGSAPMAKPLFELLAGNDRREVYIESSTSLRHPHRRPRVII CCEECCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEE PLSRSSNASLEPPRPPLRIGATVRLLDHDHLGRIGRVRSLPALPQRIPAGIRTAAVEVLL EECCCCCCCCCCCCCCEEECCEEEEECCCCCCCHHHHHCCCCCHHHCCCHHHHHHHHHEE DSGEAIWLPRSCVEVIA CCCCEEECCHHHHHHHC >Mature Secondary Structure MLYVPDGVPPVIKSTVARLDRTLPQPGEILVRQGGRVEPDDIVARGQKHNPPYMINLAQA CEECCCCCCHHHHHHHHHHHHCCCCCCHHHEECCCCCCHHHHHHCCCCCCCCEEEEHHHH LALPPDQAARAVVAPIGQPVNAGAVLARRRGLLSRRVLSPVNGILYAVDPATGYAILQPE HCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCC PQQITVTAGIRGIVMEIIDQQRVVIETPAAQIFGIASLGNDCYGVTRLLTLDPGEPITEA CCEEEEECCHHHHHHHHHCCCCEEEECCHHHHEEHHHCCCCCEEEEEEEEECCCCHHHHH MIDAQSMYAVLIGGSGISAAALRKAVENQVRGIIIGSISESVLREFFQWTKRLPFLPGLR HHHHHHEEEEEECCCCCHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHHCCCCCCCCC NWQWVSQTDSPLTIVLTEGIGSAPMAKPLFELLAGNDRREVYIESSTSLRHPHRRPRVII CCEECCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEE PLSRSSNASLEPPRPPLRIGATVRLLDHDHLGRIGRVRSLPALPQRIPAGIRTAAVEVLL EECCCCCCCCCCCCCCEEECCEEEEECCCCCCCHHHHHCCCCCHHHCCCHHHHHHHHHEE DSGEAIWLPRSCVEVIA CCCCEEECCHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA