Click here to switch to the map view.

The map label for this gene is trpH [C]

Identifier: 222526478

GI number: 222526478

Start: 4045105

End: 4045812

Strand: Reverse

Name: trpH [C]

Synonym: Chy400_3245

Alternate gene names: 222526478

Gene position: 4045812-4045105 (Counterclockwise)

Preceding gene: 222526479

Following gene: 222526470

Centisome position: 76.79

GC content: 58.62

Gene sequence:

>708_bases
GTGGAATCACTACTCACCGCTGCCGATCTCCACATTCATACTACAGCCAGTGATGGTACCGCCTCGCCAGAGGCGGTTTT
ATCGTATGTAGCAACCGAAACCGATTTGCGGGTGATTGCGATTACCGACCACGATACGCTACGCGGAGCACTCTACGCCC
GTGAACGGGCATCGCACTATGGCATTGACGTGATCGTTGGCTGTGAAATCTCGACGCGCAGCGGCCATCTGCTGGCACTG
TTCATTGAGCAGCCAGTTCCGGCGGGTCTGAGTGTTACAGAAACCGTCGCACGGATTCATGATCAAGGTGGCATGGCTTT
CGCTGCCCATCCTTTCGGCATGCTGGTACCTTCCATTGGACGACGGCACCTGCTTGGCCCGGAGCGGACTGATGTTGATT
GGATGCAGCTTGACGGTATCGAGGTCTTCAACGCCAGTCTGTGGAATCCGATGAACAATGAGCGAGCGGCCCGGTGTGCT
CAGCGATGGGGGTTGACCCACATCGGCGGTAGTGATGCACACAATCTTACAATGATTGGTGCCGGGCGCACGCTCTTTGC
CGGCACCGGCGCAGCCGATCTGCGGCGGGCATTACAGCGACGTGCTACGCTGGTGCACGGCAGGTATTGGGGATGGCGCG
GGGTTGCCGGTGTGGTGCGCGAGCGTGTATGGCGACAGTTCGGGCGACCGGTCGAGTCTGTATCATAA

Upstream 100 bases:

>100_bases
TTGAACAAAGCGGGCTACACTAAGTACGGCAAAGATATCCTGATCGTATGATCAGGGTTGACATGTGTGCCGCATCACAG
AACAAGAGGGAGTGTAGCCC

Downstream 100 bases:

>100_bases
ATGTATGACCATGGCCCGGCCTGGACGCAGACGCTGTTGTTTAGCGTGCCCACTCACCAATCGCCGGCCCGGTCTCGAAA
AAGATATCAGGTAACAGATT

Product: PHP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MESLLTAADLHIHTTASDGTASPEAVLSYVATETDLRVIAITDHDTLRGALYARERASHYGIDVIVGCEISTRSGHLLAL
FIEQPVPAGLSVTETVARIHDQGGMAFAAHPFGMLVPSIGRRHLLGPERTDVDWMQLDGIEVFNASLWNPMNNERAARCA
QRWGLTHIGGSDAHNLTMIGAGRTLFAGTGAADLRRALQRRATLVHGRYWGWRGVAGVVRERVWRQFGRPVESVS

Sequences:

>Translated_235_residues
MESLLTAADLHIHTTASDGTASPEAVLSYVATETDLRVIAITDHDTLRGALYARERASHYGIDVIVGCEISTRSGHLLAL
FIEQPVPAGLSVTETVARIHDQGGMAFAAHPFGMLVPSIGRRHLLGPERTDVDWMQLDGIEVFNASLWNPMNNERAARCA
QRWGLTHIGGSDAHNLTMIGAGRTLFAGTGAADLRRALQRRATLVHGRYWGWRGVAGVVRERVWRQFGRPVESVS
>Mature_235_residues
MESLLTAADLHIHTTASDGTASPEAVLSYVATETDLRVIAITDHDTLRGALYARERASHYGIDVIVGCEISTRSGHLLAL
FIEQPVPAGLSVTETVARIHDQGGMAFAAHPFGMLVPSIGRRHLLGPERTDVDWMQLDGIEVFNASLWNPMNNERAARCA
QRWGLTHIGGSDAHNLTMIGAGRTLFAGTGAADLRRALQRRATLVHGRYWGWRGVAGVVRERVWRQFGRPVESVS

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0417 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 25654; Mature: 25654

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLLTAADLHIHTTASDGTASPEAVLSYVATETDLRVIAITDHDTLRGALYARERASHY
CCCHHEECCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHC
GIDVIVGCEISTRSGHLLALFIEQPVPAGLSVTETVARIHDQGGMAFAAHPFGMLVPSIG
CEEEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHCC
RRHLLGPERTDVDWMQLDGIEVFNASLWNPMNNERAARCAQRWGLTHIGGSDAHNLTMIG
CCCCCCCCCCCCCEEEECCCCEEHHHHCCCCCHHHHHHHHHHCCCEECCCCCCCCEEEEE
AGRTLFAGTGAADLRRALQRRATLVHGRYWGWRGVAGVVRERVWRQFGRPVESVS
CCCEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MESLLTAADLHIHTTASDGTASPEAVLSYVATETDLRVIAITDHDTLRGALYARERASHY
CCCHHEECCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHC
GIDVIVGCEISTRSGHLLALFIEQPVPAGLSVTETVARIHDQGGMAFAAHPFGMLVPSIG
CEEEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHCC
RRHLLGPERTDVDWMQLDGIEVFNASLWNPMNNERAARCAQRWGLTHIGGSDAHNLTMIG
CCCCCCCCCCCCCEEEECCCCEEHHHHCCCCCHHHHHHHHHHCCCEECCCCCCCCEEEEE
AGRTLFAGTGAADLRRALQRRATLVHGRYWGWRGVAGVVRERVWRQFGRPVESVS
CCCEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]