| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is phnH [C]
Identifier: 222526463
GI number: 222526463
Start: 4030625
End: 4031260
Strand: Reverse
Name: phnH [C]
Synonym: Chy400_3230
Alternate gene names: 222526463
Gene position: 4031260-4030625 (Counterclockwise)
Preceding gene: 222526464
Following gene: 222526462
Centisome position: 76.51
GC content: 56.92
Gene sequence:
>636_bases ATGATGACGATTGTCGCTTCGCCACCAACACCAATTGAGCTGTTTAACAGTCGCGCCTTCCGGGTATTGCTCGATTGTCT GGCCCGTCCAGGGAAGATCGGCCAGCTCCCGCCACCGCCCTATAGCGACTTGCCGCCACTACCCGATGGCAGGCCGCCGA ACACAACGGCAGTAGCTGCCTGTATGAGCCTGCTTGATCAGCGAGTGAGTTTCGTGCATGCACATGATAACAGGTGGCTC ACTGACGACCAGCCGCTGTCTCGCTGGATTACACTCCGCAGTGGTTCACGAGTGGTTGCACCGGCCATCGCCGATTTTGC TCTGCTGCACGATACCTCCAGTCTTTCGCGCTTGAGCGAGCTACAAGAGGGATCGCTGATCTACCCGGAACAGAGTTGTA CGGCGTTTCTCTGTGTGTCAGATCTGGTAGCTACCGGTAGCACCTTCCGCCTGACGGGGCCGGGTATTGCCGGCATTGCC ACGGTCGGGATAACGTCTCACACCCCGATCCAGATAGAGCTATTACTTGCCCGGCGAGATCGCTTTCCGTTGGGGATCGA TCTCTTTCTGATTGACGACAATGGTCGCTGCCTGGGCATACCACGCACAACCCGGATATTAATACCAACGAGCTAA
Upstream 100 bases:
>100_bases TCAGACCGAAGATTGCCGCACTTGGTCACCAGCTTGGCACAGCATACGAACGCCGGTTCGCCGCCGCCGCTGCAACGCGG GTAGATTTCGAGACATTCTG
Downstream 100 bases:
>100_bases CCAATTCGAGGAGCAACCATGGGATATGTTGCCGTTCGTGGCGGTAGTGAAGCCATCAGCCGTGCCGAGGAGCTTGTCAC CTGTTTACGGCTGTTGGGTG
Product: phosphonate C-P lyase system protein PhnH
Products: NA
Alternate protein names: Phosphonate C-P Lyase System Protein PhnH; C-P Lyase Component
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MMTIVASPPTPIELFNSRAFRVLLDCLARPGKIGQLPPPPYSDLPPLPDGRPPNTTAVAACMSLLDQRVSFVHAHDNRWL TDDQPLSRWITLRSGSRVVAPAIADFALLHDTSSLSRLSELQEGSLIYPEQSCTAFLCVSDLVATGSTFRLTGPGIAGIA TVGITSHTPIQIELLLARRDRFPLGIDLFLIDDNGRCLGIPRTTRILIPTS
Sequences:
>Translated_211_residues MMTIVASPPTPIELFNSRAFRVLLDCLARPGKIGQLPPPPYSDLPPLPDGRPPNTTAVAACMSLLDQRVSFVHAHDNRWL TDDQPLSRWITLRSGSRVVAPAIADFALLHDTSSLSRLSELQEGSLIYPEQSCTAFLCVSDLVATGSTFRLTGPGIAGIA TVGITSHTPIQIELLLARRDRFPLGIDLFLIDDNGRCLGIPRTTRILIPTS >Mature_211_residues MMTIVASPPTPIELFNSRAFRVLLDCLARPGKIGQLPPPPYSDLPPLPDGRPPNTTAVAACMSLLDQRVSFVHAHDNRWL TDDQPLSRWITLRSGSRVVAPAIADFALLHDTSSLSRLSELQEGSLIYPEQSCTAFLCVSDLVATGSTFRLTGPGIAGIA TVGITSHTPIQIELLLARRDRFPLGIDLFLIDDNGRCLGIPRTTRILIPTS
Specific function: Belongs To An Operon Involved In Alkylphosphonate Uptake And C-P Lyase. Exact Function Not Known. [C]
COG id: COG3625
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22906; Mature: 22906
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTIVASPPTPIELFNSRAFRVLLDCLARPGKIGQLPPPPYSDLPPLPDGRPPNTTAVAA CEEEEECCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH CMSLLDQRVSFVHAHDNRWLTDDQPLSRWITLRSGSRVVAPAIADFALLHDTSSLSRLSE HHHHHHHHHHEEEECCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCHHHHHHHH LQEGSLIYPEQSCTAFLCVSDLVATGSTFRLTGPGIAGIATVGITSHTPIQIELLLARRD HCCCCEECCCCCCEEHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCEEEEEEEECCC RFPLGIDLFLIDDNGRCLGIPRTTRILIPTS CCCCEEEEEEECCCCCEEECCCCEEEEEECC >Mature Secondary Structure MMTIVASPPTPIELFNSRAFRVLLDCLARPGKIGQLPPPPYSDLPPLPDGRPPNTTAVAA CEEEEECCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH CMSLLDQRVSFVHAHDNRWLTDDQPLSRWITLRSGSRVVAPAIADFALLHDTSSLSRLSE HHHHHHHHHHEEEECCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCHHHHHHHH LQEGSLIYPEQSCTAFLCVSDLVATGSTFRLTGPGIAGIATVGITSHTPIQIELLLARRD HCCCCEECCCCCCEEHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCEEEEEEEECCC RFPLGIDLFLIDDNGRCLGIPRTTRILIPTS CCCCEEEEEEECCCCCEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA