| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526456
Identifier: 222526456
GI number: 222526456
Start: 4024657
End: 4025073
Strand: Reverse
Name: 222526456
Synonym: Chy400_3223
Alternate gene names: NA
Gene position: 4025073-4024657 (Counterclockwise)
Preceding gene: 222526458
Following gene: 222526455
Centisome position: 76.39
GC content: 51.32
Gene sequence:
>417_bases ATGTCAGCGCTTACCGACACCCTTGACCGTGTATTTGACCGATTACTCTTCCTCTCGCCACCACCGGCATCAACCGAAGT ACCGCTGAACAATGATGTGGGTGACGAGGAAGAAGTAGTGCCGGCAACGCCAGGCGAGCGAGCCTTTAGTTTCTCACTCT TCATCTCAGCGACCCGCTGCACGCTTCAGTATGTGCTGCTACCGGTGGTATTACCGCTGATCGGGTTGACGACTGATATT TCACTCCCCCTCGTTATTGTGCTTGATCTACTGGCAATAACCATGCTCGTGCGCAGTTTACGCTACTTCTGGCAAACCCG TCACCCGCGCCGTTTTGATATGCTCCCACTCTCCAGTGTTATTCTGTTTATCATTCTCTTTTCATTAGGATTCGATGTGT GGCAACTACTGACCTGA
Upstream 100 bases:
>100_bases CACCGGTCACTTGCCCACATCACCCTGCACTGCATTGCAGGAAAACACAGTATAATACATAGTAGAATGTAGTTCATAGT CCGTCTACATAACAATGCCT
Downstream 100 bases:
>100_bases TCGCCAGAAATGTAGCTGAGCACACCGATGCCTGCTCCTGCTTGATTAACAATTTATTCATGCAGGAGCAGGTATCTATT TCTGTATACACTCTTGTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSALTDTLDRVFDRLLFLSPPPASTEVPLNNDVGDEEEVVPATPGERAFSFSLFISATRCTLQYVLLPVVLPLIGLTTDI SLPLVIVLDLLAITMLVRSLRYFWQTRHPRRFDMLPLSSVILFIILFSLGFDVWQLLT
Sequences:
>Translated_138_residues MSALTDTLDRVFDRLLFLSPPPASTEVPLNNDVGDEEEVVPATPGERAFSFSLFISATRCTLQYVLLPVVLPLIGLTTDI SLPLVIVLDLLAITMLVRSLRYFWQTRHPRRFDMLPLSSVILFIILFSLGFDVWQLLT >Mature_137_residues SALTDTLDRVFDRLLFLSPPPASTEVPLNNDVGDEEEVVPATPGERAFSFSLFISATRCTLQYVLLPVVLPLIGLTTDIS LPLVIVLDLLAITMLVRSLRYFWQTRHPRRFDMLPLSSVILFIILFSLGFDVWQLLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15565; Mature: 15433
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALTDTLDRVFDRLLFLSPPPASTEVPLNNDVGDEEEVVPATPGERAFSFSLFISATRC CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHHHH TLQYVLLPVVLPLIGLTTDISLPLVIVLDLLAITMLVRSLRYFWQTRHPRRFDMLPLSSV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH ILFIILFSLGFDVWQLLT HHHHHHHHHHHHHHHHCC >Mature Secondary Structure SALTDTLDRVFDRLLFLSPPPASTEVPLNNDVGDEEEVVPATPGERAFSFSLFISATRC CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHHHH TLQYVLLPVVLPLIGLTTDISLPLVIVLDLLAITMLVRSLRYFWQTRHPRRFDMLPLSSV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH ILFIILFSLGFDVWQLLT HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA