| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is glmM [H]
Identifier: 222526438
GI number: 222526438
Start: 3995174
End: 3997666
Strand: Reverse
Name: glmM [H]
Synonym: Chy400_3205
Alternate gene names: 222526438
Gene position: 3997666-3995174 (Counterclockwise)
Preceding gene: 222526439
Following gene: 222526437
Centisome position: 75.87
GC content: 55.23
Gene sequence:
>2493_bases ATGAAAGCCGTTGTGATGGCCGGCGGCGAGGGCACTCGCCTGCGACCACTTACGATTAATCGCCCCAAGCCAATGGTGTC GCTGGTCGATAGACCGGTGATGCAGCATATCATTGAATTACTCAAGCTCCACGGGATTACCGATATTATCATTACAGTGC AGTATCTGGCGAATGTTATCCAGGACTATTACGGTGATGGTAGCGCGTATGGCGTCAATATCACCTATTCGCTGGAAGAA GTGCCGCTCGGTACTGCCGGTAGTGTCAAAAATGCCGAACATTTATTGACCGAACCATTTCTGGTTATCTCTGGTGATGC ACTCACCGATTTCAATCTCTCGCAAATTATCGAATATCACATGGCCTCTGGCGCTACAGCCACCGTCACCTTGACCCGTG TTTCCAATCCGCTCGATTACGGCGTTATCATCACCGATGAACAGGGGCGCATTCGGCAGTTGCTCGAAAAACCGAGCTGG GGAGAAGTCTTTTCCGACACGGTCAACACCGGTATCTATGTCTTCAATCCCGACATCTTCAGCTACATCGAACGCGGCAA AGTAACCGACTGGTCAAAAGATGTCTTTCCGCGCATGCTTCATCGTGGTGACCGGCTCCAGGGCTACATCGCAAACGGGT ATTGGACAGATGTCGGCACTATCGAGGAGTATATGCGAGCCTGCGGTGATTACCTGTCGGGCAAGGTAAATCTGCCGCGC GTCGGGCACAACATCGGTGGTGACATCTGGGTTGACCGCGATGCCGAAATTGCGCCCGATGCCCAATTACACGGGCCAAT CTATCTCGGCCATGGCGCCAAGATCAAGGGTGGCGTGATCATTCACGGGCCATCCGTCATTCGCGATTACACCATTGTCG ATAGTCGGGCCAACATCGACCGCTCGATCATCTGGCGCAATTCGTACATCGGTGAACGGGCGGAATTGCGTGGGGCGATT GTGCTTCGTCAGTGCAACATTCGTTCACGCGCCATGATCTTTGAGGGCGCCGTTATCGGTGACGGCGTGCAAATTGGCGC GGGCGCCGTTGTCCAACCCAACGTCAAAATCTGGCCCTCGAAAGAGGTTGACGAAGGCGCGACAGTTACCTCTAGCATTA TCTGGGGTAGTCAAGGCCGGCGCGTCCTCTTTGGGCGCTACGGCATTACCGGCCTGGTCAACATTGAGATCACCCCAGAA ATGTGCGCCCGCCTTGGTGCAGCCTACGGTGCCACCCTGCCGCGTGGCGCCACGGTAACCATCAATCGTGATGCGCACTT CACGCCACGGATGCTGAAACGGGCGATTATTGCCGGCCTGCCTTCGGCTGGGGTGAATGTCTGCGATTTGCGTAATGTGC CGATCCCGATTGCCCGCTACTACACCCACGCCAGTGGCGCCGCCGGTGGCGTCCATGTGCGTATTTCACCATTCGACAAT CGGGTCGCCGAGATTAAGTTTTTCAATCACCTTGGGTTGGATATTAACAGTGCAACCGAACGCAAAATCGAGAGCACCTT CTTCCGGGAAGATTACCGGCGAGCCTATCTTGATGAAATTGGGCGTATCTTCTACGGTGAAGACGTTGAAGAGACCTACC GGGCCGCATTTATGCGCGCACTGGGCCAGAATGCCGCATTCGGGAAAGGCTTTCCCATCGTTATCGATTATGCCAACACC AGTACCAGCACCGTCATGGCCGAAATCTTACGGCGCATGCAGGCCGATGCGGTTGAGCTGAATGTCTATCTCGACGAACG GATGGTCTTTCAGACGAGTGCTGATTTTGAAGCGGCGATGAATCGGCTGACCAAGATCACACCGGTTGTGGGAGCACAAT TTGGTGTGAGGCTCGACCCTGGCGGCGAGAAGATTTTTCTGATCGATGATCAGGGCCGGCGTCTCCATCCCCTGCGAGCA CTGGCAGCAATTACCGCGCTGGCAATGCGGGCAAACGGTGGCGGAGTGGTTGCTGTACCGGTGACAGCACCACGCGCCTT TGAGCAGATCGCCGCCCGTTACGGCGGCAGCATCATTCGCACACGAGCCAATCTGGGCGCATTAATGAATCTGGCGGCTG AACGCGCCGATCTCCTGCTGCTAGGTGATGGCACCGGTAATTATATCTTTCCCCATTTCTATCCCGTTGCCGACGGTATG TTCGCTATTGCACGCCTGATGGAGCTGCTTTCGCTTAACCAGACGACTCTAAGTGAGGTACTGGCGGATTTGCCGCCGTA CTACCTCTGGCAAACCCGCGTTCCGTGTCGCTGGGAAAGCAAGGGTAAGGTGATGCGCATTCTCAACCAGCAATACCACG AGCGCCACGGCGAGCAGATTGACGGCATCAAGATTGAACTGGGTGAGGAATGGGTGCTTATCCTGCCTGACCCGGATGGG CCATTCTTCCACGTCATTGCCGAGGGAGTTAGCGAAGACCACGCCCGTATCCTGACCGACAAATATGCCGGTTTGGTAAC CAGTTTGCAGTAG
Upstream 100 bases:
>100_bases AGCTTTGGAGCATGATATACTAAAGATGTTTGTGCGGAAGCAGTTCCCCGCTACGAAGCGCAATTATCGTCGCGGTATCA TATAGTTTGCAGGAGCCGCC
Downstream 100 bases:
>100_bases TGCTGTTCGTGTGATACCGCGGCCTGATGTACAGAGGAGGGTGCGATGACTAACCGCACACACCACGACGATCCGCTTTA CAACGCGATTGCAGAGACAA
Product: nucleotidyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 830; Mature: 830
Protein sequence:
>830_residues MKAVVMAGGEGTRLRPLTINRPKPMVSLVDRPVMQHIIELLKLHGITDIIITVQYLANVIQDYYGDGSAYGVNITYSLEE VPLGTAGSVKNAEHLLTEPFLVISGDALTDFNLSQIIEYHMASGATATVTLTRVSNPLDYGVIITDEQGRIRQLLEKPSW GEVFSDTVNTGIYVFNPDIFSYIERGKVTDWSKDVFPRMLHRGDRLQGYIANGYWTDVGTIEEYMRACGDYLSGKVNLPR VGHNIGGDIWVDRDAEIAPDAQLHGPIYLGHGAKIKGGVIIHGPSVIRDYTIVDSRANIDRSIIWRNSYIGERAELRGAI VLRQCNIRSRAMIFEGAVIGDGVQIGAGAVVQPNVKIWPSKEVDEGATVTSSIIWGSQGRRVLFGRYGITGLVNIEITPE MCARLGAAYGATLPRGATVTINRDAHFTPRMLKRAIIAGLPSAGVNVCDLRNVPIPIARYYTHASGAAGGVHVRISPFDN RVAEIKFFNHLGLDINSATERKIESTFFREDYRRAYLDEIGRIFYGEDVEETYRAAFMRALGQNAAFGKGFPIVIDYANT STSTVMAEILRRMQADAVELNVYLDERMVFQTSADFEAAMNRLTKITPVVGAQFGVRLDPGGEKIFLIDDQGRRLHPLRA LAAITALAMRANGGGVVAVPVTAPRAFEQIAARYGGSIIRTRANLGALMNLAAERADLLLLGDGTGNYIFPHFYPVADGM FAIARLMELLSLNQTTLSEVLADLPPYYLWQTRVPCRWESKGKVMRILNQQYHERHGEQIDGIKIELGEEWVLILPDPDG PFFHVIAEGVSEDHARILTDKYAGLVTSLQ
Sequences:
>Translated_830_residues MKAVVMAGGEGTRLRPLTINRPKPMVSLVDRPVMQHIIELLKLHGITDIIITVQYLANVIQDYYGDGSAYGVNITYSLEE VPLGTAGSVKNAEHLLTEPFLVISGDALTDFNLSQIIEYHMASGATATVTLTRVSNPLDYGVIITDEQGRIRQLLEKPSW GEVFSDTVNTGIYVFNPDIFSYIERGKVTDWSKDVFPRMLHRGDRLQGYIANGYWTDVGTIEEYMRACGDYLSGKVNLPR VGHNIGGDIWVDRDAEIAPDAQLHGPIYLGHGAKIKGGVIIHGPSVIRDYTIVDSRANIDRSIIWRNSYIGERAELRGAI VLRQCNIRSRAMIFEGAVIGDGVQIGAGAVVQPNVKIWPSKEVDEGATVTSSIIWGSQGRRVLFGRYGITGLVNIEITPE MCARLGAAYGATLPRGATVTINRDAHFTPRMLKRAIIAGLPSAGVNVCDLRNVPIPIARYYTHASGAAGGVHVRISPFDN RVAEIKFFNHLGLDINSATERKIESTFFREDYRRAYLDEIGRIFYGEDVEETYRAAFMRALGQNAAFGKGFPIVIDYANT STSTVMAEILRRMQADAVELNVYLDERMVFQTSADFEAAMNRLTKITPVVGAQFGVRLDPGGEKIFLIDDQGRRLHPLRA LAAITALAMRANGGGVVAVPVTAPRAFEQIAARYGGSIIRTRANLGALMNLAAERADLLLLGDGTGNYIFPHFYPVADGM FAIARLMELLSLNQTTLSEVLADLPPYYLWQTRVPCRWESKGKVMRILNQQYHERHGEQIDGIKIELGEEWVLILPDPDG PFFHVIAEGVSEDHARILTDKYAGLVTSLQ >Mature_830_residues MKAVVMAGGEGTRLRPLTINRPKPMVSLVDRPVMQHIIELLKLHGITDIIITVQYLANVIQDYYGDGSAYGVNITYSLEE VPLGTAGSVKNAEHLLTEPFLVISGDALTDFNLSQIIEYHMASGATATVTLTRVSNPLDYGVIITDEQGRIRQLLEKPSW GEVFSDTVNTGIYVFNPDIFSYIERGKVTDWSKDVFPRMLHRGDRLQGYIANGYWTDVGTIEEYMRACGDYLSGKVNLPR VGHNIGGDIWVDRDAEIAPDAQLHGPIYLGHGAKIKGGVIIHGPSVIRDYTIVDSRANIDRSIIWRNSYIGERAELRGAI VLRQCNIRSRAMIFEGAVIGDGVQIGAGAVVQPNVKIWPSKEVDEGATVTSSIIWGSQGRRVLFGRYGITGLVNIEITPE MCARLGAAYGATLPRGATVTINRDAHFTPRMLKRAIIAGLPSAGVNVCDLRNVPIPIARYYTHASGAAGGVHVRISPFDN RVAEIKFFNHLGLDINSATERKIESTFFREDYRRAYLDEIGRIFYGEDVEETYRAAFMRALGQNAAFGKGFPIVIDYANT STSTVMAEILRRMQADAVELNVYLDERMVFQTSADFEAAMNRLTKITPVVGAQFGVRLDPGGEKIFLIDDQGRRLHPLRA LAAITALAMRANGGGVVAVPVTAPRAFEQIAARYGGSIIRTRANLGALMNLAAERADLLLLGDGTGNYIFPHFYPVADGM FAIARLMELLSLNQTTLSEVLADLPPYYLWQTRVPCRWESKGKVMRILNQQYHERHGEQIDGIKIELGEEWVLILPDPDG PFFHVIAEGVSEDHARILTDKYAGLVTSLQ
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=365, Percent_Identity=30.958904109589, Blast_Score=180, Evalue=6e-45, Organism=Homo sapiens, GI11761619, Length=317, Percent_Identity=33.1230283911672, Blast_Score=177, Evalue=4e-44, Organism=Homo sapiens, GI31881779, Length=409, Percent_Identity=25.9168704156479, Blast_Score=104, Evalue=3e-22, Organism=Homo sapiens, GI45447090, Length=409, Percent_Identity=25.9168704156479, Blast_Score=104, Evalue=3e-22, Organism=Escherichia coli, GI1788351, Length=235, Percent_Identity=28.936170212766, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1789837, Length=396, Percent_Identity=25, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI1790224, Length=236, Percent_Identity=28.3898305084746, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI133931050, Length=386, Percent_Identity=33.160621761658, Blast_Score=188, Evalue=9e-48, Organism=Caenorhabditis elegans, GI17509979, Length=378, Percent_Identity=25.1322751322751, Blast_Score=108, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17509981, Length=367, Percent_Identity=23.9782016348774, Blast_Score=99, Evalue=7e-21, Organism=Saccharomyces cerevisiae, GI6320148, Length=332, Percent_Identity=34.0361445783133, Blast_Score=181, Evalue=3e-46, Organism=Drosophila melanogaster, GI21355443, Length=329, Percent_Identity=32.8267477203647, Blast_Score=188, Evalue=2e-47, Organism=Drosophila melanogaster, GI24644084, Length=329, Percent_Identity=32.8267477203647, Blast_Score=188, Evalue=2e-47, Organism=Drosophila melanogaster, GI24653912, Length=376, Percent_Identity=28.9893617021277, Blast_Score=113, Evalue=7e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 91582; Mature: 91582
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVVMAGGEGTRLRPLTINRPKPMVSLVDRPVMQHIIELLKLHGITDIIITVQYLANVI CCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QDYYGDGSAYGVNITYSLEEVPLGTAGSVKNAEHLLTEPFLVISGDALTDFNLSQIIEYH HHHCCCCCEEEEEEEEEHHHCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCHHHHHHHH MASGATATVTLTRVSNPLDYGVIITDEQGRIRQLLEKPSWGEVFSDTVNTGIYVFNPDIF HCCCCEEEEEEEECCCCCCCCEEEECCCHHHHHHHCCCCCCHHHHHHHHCCEEEECCHHH SYIERGKVTDWSKDVFPRMLHRGDRLQGYIANGYWTDVGTIEEYMRACGDYLSGKVNLPR HHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCEECCHHHHHHHHHHHHHHHCCCCCCCC VGHNIGGDIWVDRDAEIAPDAQLHGPIYLGHGAKIKGGVIIHGPSVIRDYTIVDSRANID CCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCEEECCEEEECCHHHEEEEEECCCCCCC RSIIWRNSYIGERAELRGAIVLRQCNIRSRAMIFEGAVIGDGVQIGAGAVVQPNVKIWPS CEEEEECCCCCCHHHCCEEEEEEECCCCCCEEEEECEEECCCEEECCCCEECCCCEECCC KEVDEGATVTSSIIWGSQGRRVLFGRYGITGLVNIEITPEMCARLGAAYGATLPRGATVT CCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEEEEECHHHHHHHHHHHCCCCCCCCEEE INRDAHFTPRMLKRAIIAGLPSAGVNVCDLRNVPIPIARYYTHASGAAGGVHVRISPFDN ECCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHEECCCCCCCEEEEEECCCCC RVAEIKFFNHLGLDINSATERKIESTFFREDYRRAYLDEIGRIFYGEDVEETYRAAFMRA CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH LGQNAAFGKGFPIVIDYANTSTSTVMAEILRRMQADAVELNVYLDERMVFQTSADFEAAM HCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEECCEEEEECCCCHHHHH NRLTKITPVVGAQFGVRLDPGGEKIFLIDDQGRRLHPLRALAAITALAMRANGGGVVAVP HHHHHHCHHHCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHEEECCCCEEEEE VTAPRAFEQIAARYGGSIIRTRANLGALMNLAAERADLLLLGDGTGNYIFPHFYPVADGM CCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCEEEEECCCCCEECCCEEHHHHHH FAIARLMELLSLNQTTLSEVLADLPPYYLWQTRVPCRWESKGKVMRILNQQYHERHGEQI HHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCEECCCCHHHHHHHHHHHHHCCCCC DGIKIELGEEWVLILPDPDGPFFHVIAEGVSEDHARILTDKYAGLVTSLQ CCEEEEECCCEEEEEECCCCCEEEEEHHCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKAVVMAGGEGTRLRPLTINRPKPMVSLVDRPVMQHIIELLKLHGITDIIITVQYLANVI CCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QDYYGDGSAYGVNITYSLEEVPLGTAGSVKNAEHLLTEPFLVISGDALTDFNLSQIIEYH HHHCCCCCEEEEEEEEEHHHCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCHHHHHHHH MASGATATVTLTRVSNPLDYGVIITDEQGRIRQLLEKPSWGEVFSDTVNTGIYVFNPDIF HCCCCEEEEEEEECCCCCCCCEEEECCCHHHHHHHCCCCCCHHHHHHHHCCEEEECCHHH SYIERGKVTDWSKDVFPRMLHRGDRLQGYIANGYWTDVGTIEEYMRACGDYLSGKVNLPR HHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCEECCHHHHHHHHHHHHHHHCCCCCCCC VGHNIGGDIWVDRDAEIAPDAQLHGPIYLGHGAKIKGGVIIHGPSVIRDYTIVDSRANID CCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCEEECCEEEECCHHHEEEEEECCCCCCC RSIIWRNSYIGERAELRGAIVLRQCNIRSRAMIFEGAVIGDGVQIGAGAVVQPNVKIWPS CEEEEECCCCCCHHHCCEEEEEEECCCCCCEEEEECEEECCCEEECCCCEECCCCEECCC KEVDEGATVTSSIIWGSQGRRVLFGRYGITGLVNIEITPEMCARLGAAYGATLPRGATVT CCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEEEEECHHHHHHHHHHHCCCCCCCCEEE INRDAHFTPRMLKRAIIAGLPSAGVNVCDLRNVPIPIARYYTHASGAAGGVHVRISPFDN ECCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHEECCCCCCCEEEEEECCCCC RVAEIKFFNHLGLDINSATERKIESTFFREDYRRAYLDEIGRIFYGEDVEETYRAAFMRA CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH LGQNAAFGKGFPIVIDYANTSTSTVMAEILRRMQADAVELNVYLDERMVFQTSADFEAAM HCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEECCEEEEECCCCHHHHH NRLTKITPVVGAQFGVRLDPGGEKIFLIDDQGRRLHPLRALAAITALAMRANGGGVVAVP HHHHHHCHHHCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHEEECCCCEEEEE VTAPRAFEQIAARYGGSIIRTRANLGALMNLAAERADLLLLGDGTGNYIFPHFYPVADGM CCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCEEEEECCCCCEECCCEEHHHHHH FAIARLMELLSLNQTTLSEVLADLPPYYLWQTRVPCRWESKGKVMRILNQQYHERHGEQI HHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCEECCCCHHHHHHHHHHHHHCCCCC DGIKIELGEEWVLILPDPDGPFFHVIAEGVSEDHARILTDKYAGLVTSLQ CCEEEEECCCEEEEEECCCCCEEEEEHHCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA