| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yxjF [H]
Identifier: 222526434
GI number: 222526434
Start: 3990123
End: 3990881
Strand: Reverse
Name: yxjF [H]
Synonym: Chy400_3201
Alternate gene names: 222526434
Gene position: 3990881-3990123 (Counterclockwise)
Preceding gene: 222526435
Following gene: 222526420
Centisome position: 75.74
GC content: 59.68
Gene sequence:
>759_bases ATGGGTGATAAGGTTGCACTCATCACCGGCGCCGCCAGTGGCATCGGCCTGGCCTGCGCCGAGCGATTCGCTGCCGACGG GTATCGGGTTGTGCTGGTTGATCTGCCGGGTGCCGCCGGCGAAGCAGCCGCTGAACGGCTGGGTGGCATCTTTGCCGGCG TTGATTTAGCCACGCAGGCCGGGTGCCGGCAAGCGGTTGATGCAGCGCTCAATGCATATGGTCGGGTTGACGTGCTAATC AACAATGCCGGCTTTCAGCATATCGACGCTATCGAAGACTTCCCTGAAGAGCGTTGGGAGACAATGATTGCCGTGATGCT AACGGCACCGTTCCGGCTCACCAAATACGTCTGGCCGGGGATGAAAGCCAACCGCTGGGGACGGATTGTCAATATTGGTT CGGTACATAGCCTGCGTGCCTCACCGTTCAAAAGCGCCTACATCTCGGCCAAACATGGCTTACTCGGTCTCACGCGCACT GCCGCACTTGAGGGTGGCCCTTACGGCATTACCGTCAACCTGATCGCACCGGCATACGTCAGAACACCGCTGGTCGAGAA ACAGATCGCGGATCAATCGCGCACACGGGGCATTCCCGAAGATCAGGTGATCGAGAAAATCATGCTCGAACCAGCCGCGA TCAAGCGCCTGATCGAACCGGCGGAGGTGGCCGGACTGGCGGCATTTCTCTGTTCAGATGCAGCAGGGGCGATAACCGGC TCCGTGTACGAAATGGCGCTGGGGTGGACGGCACGTTAG
Upstream 100 bases:
>100_bases ATTATGTCAATGCCGATCAATCGCCAGCAGCCGTTGTTGCCCTGATTCGCGACATCATCTAGCTATATTCGCTATGTCAT AACCAAAGGAGGTTACAACG
Downstream 100 bases:
>100_bases CAATTGATCGCGGGCAGGATCAAGCCTGCCCGCTACGAACTCGTCTCCAACCCCAGAATCGCTCGTGCCTCGGCGACATC ACTGGTAATTTGCGCCACCA
Product: 3-hydroxybutyrate dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MGDKVALITGAASGIGLACAERFAADGYRVVLVDLPGAAGEAAAERLGGIFAGVDLATQAGCRQAVDAALNAYGRVDVLI NNAGFQHIDAIEDFPEERWETMIAVMLTAPFRLTKYVWPGMKANRWGRIVNIGSVHSLRASPFKSAYISAKHGLLGLTRT AALEGGPYGITVNLIAPAYVRTPLVEKQIADQSRTRGIPEDQVIEKIMLEPAAIKRLIEPAEVAGLAAFLCSDAAGAITG SVYEMALGWTAR
Sequences:
>Translated_252_residues MGDKVALITGAASGIGLACAERFAADGYRVVLVDLPGAAGEAAAERLGGIFAGVDLATQAGCRQAVDAALNAYGRVDVLI NNAGFQHIDAIEDFPEERWETMIAVMLTAPFRLTKYVWPGMKANRWGRIVNIGSVHSLRASPFKSAYISAKHGLLGLTRT AALEGGPYGITVNLIAPAYVRTPLVEKQIADQSRTRGIPEDQVIEKIMLEPAAIKRLIEPAEVAGLAAFLCSDAAGAITG SVYEMALGWTAR >Mature_251_residues GDKVALITGAASGIGLACAERFAADGYRVVLVDLPGAAGEAAAERLGGIFAGVDLATQAGCRQAVDAALNAYGRVDVLIN NAGFQHIDAIEDFPEERWETMIAVMLTAPFRLTKYVWPGMKANRWGRIVNIGSVHSLRASPFKSAYISAKHGLLGLTRTA ALEGGPYGITVNLIAPAYVRTPLVEKQIADQSRTRGIPEDQVIEKIMLEPAAIKRLIEPAEVAGLAAFLCSDAAGAITGS VYEMALGWTAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=258, Percent_Identity=33.7209302325581, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI4504505, Length=262, Percent_Identity=29.7709923664122, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI4758504, Length=236, Percent_Identity=33.0508474576271, Blast_Score=101, Evalue=7e-22, Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=31.2741312741313, Blast_Score=101, Evalue=8e-22, Organism=Homo sapiens, GI5031737, Length=260, Percent_Identity=29.6153846153846, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI20149619, Length=204, Percent_Identity=32.843137254902, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI31542939, Length=195, Percent_Identity=32.3076923076923, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI66933014, Length=229, Percent_Identity=27.9475982532751, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI83715985, Length=180, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=30, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI7705925, Length=245, Percent_Identity=31.8367346938775, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI40254992, Length=228, Percent_Identity=30.7017543859649, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI59889578, Length=214, Percent_Identity=28.0373831775701, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI10190704, Length=246, Percent_Identity=28.4552845528455, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI33667109, Length=190, Percent_Identity=32.6315789473684, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI19923817, Length=249, Percent_Identity=28.9156626506024, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI7657478, Length=201, Percent_Identity=31.8407960199005, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI126723191, Length=181, Percent_Identity=32.0441988950276, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI224922801, Length=169, Percent_Identity=32.5443786982249, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI157739938, Length=190, Percent_Identity=26.8421052631579, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI7706318, Length=213, Percent_Identity=28.169014084507, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI223718074, Length=196, Percent_Identity=33.1632653061224, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI142976729, Length=213, Percent_Identity=26.7605633802817, Blast_Score=68, Evalue=7e-12, Organism=Escherichia coli, GI87082100, Length=248, Percent_Identity=37.0967741935484, Blast_Score=125, Evalue=2e-30, Organism=Escherichia coli, GI1787335, Length=239, Percent_Identity=34.3096234309623, Blast_Score=125, Evalue=4e-30, Organism=Escherichia coli, GI1790717, Length=244, Percent_Identity=29.5081967213115, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI87082160, Length=253, Percent_Identity=30.4347826086957, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=32.520325203252, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1789208, Length=255, Percent_Identity=29.8039215686275, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=32, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1789057, Length=247, Percent_Identity=26.3157894736842, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI2367365, Length=243, Percent_Identity=29.6296296296296, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1789378, Length=251, Percent_Identity=28.2868525896414, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786812, Length=242, Percent_Identity=28.5123966942149, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1786701, Length=199, Percent_Identity=29.6482412060301, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17561402, Length=259, Percent_Identity=32.4324324324324, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17555706, Length=253, Percent_Identity=26.8774703557312, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17560676, Length=258, Percent_Identity=27.906976744186, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17568967, Length=259, Percent_Identity=27.4131274131274, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=28.4584980237154, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI25147288, Length=257, Percent_Identity=26.0700389105058, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17538182, Length=193, Percent_Identity=31.0880829015544, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17559104, Length=253, Percent_Identity=29.6442687747036, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562904, Length=251, Percent_Identity=29.8804780876494, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71994600, Length=254, Percent_Identity=26.3779527559055, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17551412, Length=192, Percent_Identity=31.25, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17564282, Length=187, Percent_Identity=31.0160427807487, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17562910, Length=254, Percent_Identity=28.740157480315, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17565030, Length=198, Percent_Identity=31.3131313131313, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17538486, Length=193, Percent_Identity=31.6062176165803, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71982365, Length=188, Percent_Identity=29.7872340425532, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17531453, Length=251, Percent_Identity=27.8884462151394, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17560332, Length=223, Percent_Identity=30.0448430493274, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17538480, Length=203, Percent_Identity=29.5566502463054, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17508895, Length=198, Percent_Identity=28.7878787878788, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17562908, Length=248, Percent_Identity=27.8225806451613, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI72000259, Length=230, Percent_Identity=27.8260869565217, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI193203115, Length=190, Percent_Identity=28.4210526315789, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193203117, Length=190, Percent_Identity=28.4210526315789, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17562906, Length=248, Percent_Identity=27.4193548387097, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI193204405, Length=257, Percent_Identity=29.1828793774319, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17558628, Length=188, Percent_Identity=32.9787234042553, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17563726, Length=248, Percent_Identity=27.4193548387097, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17536651, Length=256, Percent_Identity=26.171875, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI115534694, Length=255, Percent_Identity=27.4509803921569, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=260, Percent_Identity=30.3846153846154, Blast_Score=115, Evalue=5e-27, Organism=Drosophila melanogaster, GI18859837, Length=262, Percent_Identity=29.7709923664122, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI21357041, Length=244, Percent_Identity=31.1475409836066, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI28571526, Length=247, Percent_Identity=32.3886639676113, Blast_Score=98, Evalue=5e-21, Organism=Drosophila melanogaster, GI24644339, Length=244, Percent_Identity=32.7868852459016, Blast_Score=97, Evalue=8e-21, Organism=Drosophila melanogaster, GI24639444, Length=252, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI21355319, Length=255, Percent_Identity=27.4509803921569, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=32.4, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI17737361, Length=241, Percent_Identity=29.8755186721992, Blast_Score=88, Evalue=5e-18, Organism=Drosophila melanogaster, GI24643142, Length=242, Percent_Identity=28.9256198347107, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI21358495, Length=226, Percent_Identity=28.7610619469027, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24649181, Length=189, Percent_Identity=30.1587301587302, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI21357673, Length=188, Percent_Identity=30.3191489361702, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI161076933, Length=200, Percent_Identity=27.5, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24584748, Length=200, Percent_Identity=27.5, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24584752, Length=187, Percent_Identity=27.2727272727273, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011294 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 26653; Mature: 26522
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDKVALITGAASGIGLACAERFAADGYRVVLVDLPGAAGEAAAERLGGIFAGVDLATQA CCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHH GCRQAVDAALNAYGRVDVLINNAGFQHIDAIEDFPEERWETMIAVMLTAPFRLTKYVWPG HHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHCCC MKANRWGRIVNIGSVHSLRASPFKSAYISAKHGLLGLTRTAALEGGPYGITVNLIAPAYV CCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCEEEHHHHHCCCCCCEEEEEEECCHHH RTPLVEKQIADQSRTRGIPEDQVIEKIMLEPAAIKRLIEPAEVAGLAAFLCSDAAGAITG HCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHCCCCCHHHH SVYEMALGWTAR HHHHHHCCCCCC >Mature Secondary Structure GDKVALITGAASGIGLACAERFAADGYRVVLVDLPGAAGEAAAERLGGIFAGVDLATQA CCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHH GCRQAVDAALNAYGRVDVLINNAGFQHIDAIEDFPEERWETMIAVMLTAPFRLTKYVWPG HHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHCCC MKANRWGRIVNIGSVHSLRASPFKSAYISAKHGLLGLTRTAALEGGPYGITVNLIAPAYV CCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCEEEHHHHHCCCCCCEEEEEEECCHHH RTPLVEKQIADQSRTRGIPEDQVIEKIMLEPAAIKRLIEPAEVAGLAAFLCSDAAGAITG HCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHCCCCCHHHH SVYEMALGWTAR HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]