| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526390
Identifier: 222526390
GI number: 222526390
Start: 3911194
End: 3911676
Strand: Reverse
Name: 222526390
Synonym: Chy400_3156
Alternate gene names: NA
Gene position: 3911676-3911194 (Counterclockwise)
Preceding gene: 222526391
Following gene: 222526389
Centisome position: 74.24
GC content: 47.2
Gene sequence:
>483_bases ATGAGCAAGATTCAGGTTGTTGTCAGTGGTCTGGGATGGATGGGAAGTGGAATCGGTTCAATAGAGTCGGCAATTGAGGA GCTGCTGGAAGAAGCTCGGGATGAAATTCTGCTGACAGCGTATGCTATCGGCAAAACTGATCGGATTTTCAAGCTGCTAG AAGTAGCGTTGTTACGGGGAGTACGTGTACGCATGATTGTCAATCGTCTGCCTGAACAACACGAATCAATTCAACACATC CTGAATGAGTTACAGAAGAAATACCGCCACTTTCAACTCTATCCGTTCAACCCTGGTAACGAACGCGGCGATCTGCACGC TAAAGTACTGGTAGTTGACCGGAAACGTGCCCTGGTTGGTTCTTCAAACCTTTCATACAACGGGCTGATTCTCAACCATG AAATGGCTGTTTTGATTGATGGTCAGGAAGCAGCGACAATTGGGGTAGCAATTGACAGACTGACTGGACATGCAGGGATC TAA
Upstream 100 bases:
>100_bases ACAATGGTGCAGCCTGTTATGCCTGCTCGCTGGTGTCTGAAACTTCCTGTGAACATCGGAATATGTCGCTTGACCGTAAA TTACTTCTGGAAGGGTTACA
Downstream 100 bases:
>100_bases CTATCATCTCATGACATCCTGTAGAAAGAGGCGATGCCCGGTTGATCGTGTGAGTCAATCGGACACCTAAAACCGCTTCT GTCAGTGACCTGCCGTTCGG
Product: putative endonuclease
Products: NA
Alternate protein names: Phospholipase D/Transphosphatidylase
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSKIQVVVSGLGWMGSGIGSIESAIEELLEEARDEILLTAYAIGKTDRIFKLLEVALLRGVRVRMIVNRLPEQHESIQHI LNELQKKYRHFQLYPFNPGNERGDLHAKVLVVDRKRALVGSSNLSYNGLILNHEMAVLIDGQEAATIGVAIDRLTGHAGI
Sequences:
>Translated_160_residues MSKIQVVVSGLGWMGSGIGSIESAIEELLEEARDEILLTAYAIGKTDRIFKLLEVALLRGVRVRMIVNRLPEQHESIQHI LNELQKKYRHFQLYPFNPGNERGDLHAKVLVVDRKRALVGSSNLSYNGLILNHEMAVLIDGQEAATIGVAIDRLTGHAGI >Mature_159_residues SKIQVVVSGLGWMGSGIGSIESAIEELLEEARDEILLTAYAIGKTDRIFKLLEVALLRGVRVRMIVNRLPEQHESIQHIL NELQKKYRHFQLYPFNPGNERGDLHAKVLVVDRKRALVGSSNLSYNGLILNHEMAVLIDGQEAATIGVAIDRLTGHAGI
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17749; Mature: 17618
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIQVVVSGLGWMGSGIGSIESAIEELLEEARDEILLTAYAIGKTDRIFKLLEVALLRG CCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHCC VRVRMIVNRLPEQHESIQHILNELQKKYRHFQLYPFNPGNERGDLHAKVLVVDRKRALVG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEEECCHHEEC SSNLSYNGLILNHEMAVLIDGQEAATIGVAIDRLTGHAGI CCCCCCCEEEEECCEEEEECCCCCEEHHHHHHHHCCCCCC >Mature Secondary Structure SKIQVVVSGLGWMGSGIGSIESAIEELLEEARDEILLTAYAIGKTDRIFKLLEVALLRG CHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHCC VRVRMIVNRLPEQHESIQHILNELQKKYRHFQLYPFNPGNERGDLHAKVLVVDRKRALVG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEEECCHHEEC SSNLSYNGLILNHEMAVLIDGQEAATIGVAIDRLTGHAGI CCCCCCCEEEEECCEEEEECCCCCEEHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA