| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526280
Identifier: 222526280
GI number: 222526280
Start: 3756156
End: 3757586
Strand: Direct
Name: 222526280
Synonym: Chy400_3046
Alternate gene names: NA
Gene position: 3756156-3757586 (Clockwise)
Preceding gene: 222526279
Following gene: 222526282
Centisome position: 71.29
GC content: 58.21
Gene sequence:
>1431_bases ATGGATCGACGTATTACCGAGTTCATTGCCGGTCTCCGAGCTGCCGGCGTGCGCATTAGTGTTGCTGAGTCTGCCGATGC GTTGCGAGCGATTGAACAGGCCGGTATTGCCGACCGCAATATTTTCCGGTTGGCGTTGCAGACAGCGCTGATCAAAGAGC GGCAGGATCAGACGATCTTCAACGAACTGTTCCCGCTCTATTTTGGCAAAGACGCTCCGCCGGCAATGCAACCGGCTGGT GGTGGACAGCTTTCGCCCTCTGAACTGCAACAACTGATGCAGCAGTTACAACAACTCCTCTCCCAACTGCCTCCTGGCCC GCTCCGTCAGCTCTTCCAGAGTATGGTGAGCGGTCAGCCACTCAGTAATCAACAGATTCGCTCGATGCTGGCGAATGCCT CTCCGCCACATATGACCAATCCACGCTATCGTGACTGGATGGCGCGCCAGGCGATGCGTGAGTTGCAGATGCAGCGGTTG CAGCAGGCGCTCCGTCAGCTCCTTGCCCAGCTCCGCGAGCAAGGGATGCGGGAAGAGGCGTTGCAGGCTATCGAACAGGC CGCACGGGCTAACCTGCAAGCGCTGGAGCAGCAGATCGGTCAGCAGGTGGCGCAGCAGATGCAGGAACAGGCGCAAGGTC AGGGGCCGCGCCAGAGTCAGGGCCGTCCCAGTGAGCGAGAGTTACTCGACCTACCGCTGGAACGCCTTGATGAGAGCCTG CTCCCGGAGATGCGAACGCTGGTACGAAAACTGGCTGCCCGTCTGCGTACACGGCTGGCGCTGCGCCAGCGTCGTGGTAA GACCGGTACCCTCGATGCCAAAGCGACGATCCGCACCAATCAGCGATTTGGTGGCGTGCCGATGCTGATCCGTCATCGCA AACGGCATCTCAAACCAAAATTGGTGATCTTGTGTGATCGTAGCGTCAGCACGCAGCACGTCATGTCGTGTATGTTGCTG ATGATCTATGCCCTGCACGATCAGGTCAGTCGTACCCGCTCGTTTGCATTTATTGACCGCCTGTACGACATGTCGCACTA CTTTGCCGAATCACGCCCGGAGCAGGCGATTACGCAGGTATTGGCTGAGATTCGGCCGACGCGCAGCTACAGTACCGATC TCGGTCATGCACTGGCTGAATTCTGCCGTGATCAGCTTCACCTAGTTGACCGGCGAACAACGGTGATTGTCCTTGGTGAT GGACGCAACAACGACAATGATCCCAACCTGCCGGCATTCGAGCAGATTCGGCGGCGGGCGCGGCGAATTGTCTGGTTTGC CACTGAAGAGCGCTGGAAGTGGGGAGTCTACGATCCCGGATCGCTGAGCAGCGACATCTACAAATACGCACCGATGTGTG ATGCGATGCACGAGGTGACAACCCTGCGCCAGTTGGCGAACGCTATTGATCGCCTGTTCTTACACCCGTAG
Upstream 100 bases:
>100_bases CAGGGAGATCGGCCCGACCGTCCTGATCGTCCTGACCGCCCTGATCGCCCACGCGGTGGGTATCGTGGTAGTGATTGGAC AAATAACTAGCGGAGTAGCT
Downstream 100 bases:
>100_bases ATGCGTCATTAGCGTATGCGGGAATACACGTATAACTTAGTGTGGCGTGCGGAAGTCGGGCTTCCGCACAGTTTGTCTTG AGATGATCAGTGTTCGATAG
Product: VWA containing CoxE family protein
Products: NA
Alternate protein names: VWA Containing CoxE-Like; VWA Domain Containing CoxE-Like Protein; VWA Containing CoxE-Like Protein; Von Willebrand Factor Type A Domain-Containing Protein; VWA Domain-Containing Protein; Vwa Domain Coxe-Like Protein; Carbon Monoxide Dehydrogenase CoxE Accessory Protein; VWA Domain Protein
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MDRRITEFIAGLRAAGVRISVAESADALRAIEQAGIADRNIFRLALQTALIKERQDQTIFNELFPLYFGKDAPPAMQPAG GGQLSPSELQQLMQQLQQLLSQLPPGPLRQLFQSMVSGQPLSNQQIRSMLANASPPHMTNPRYRDWMARQAMRELQMQRL QQALRQLLAQLREQGMREEALQAIEQAARANLQALEQQIGQQVAQQMQEQAQGQGPRQSQGRPSERELLDLPLERLDESL LPEMRTLVRKLAARLRTRLALRQRRGKTGTLDAKATIRTNQRFGGVPMLIRHRKRHLKPKLVILCDRSVSTQHVMSCMLL MIYALHDQVSRTRSFAFIDRLYDMSHYFAESRPEQAITQVLAEIRPTRSYSTDLGHALAEFCRDQLHLVDRRTTVIVLGD GRNNDNDPNLPAFEQIRRRARRIVWFATEERWKWGVYDPGSLSSDIYKYAPMCDAMHEVTTLRQLANAIDRLFLHP
Sequences:
>Translated_476_residues MDRRITEFIAGLRAAGVRISVAESADALRAIEQAGIADRNIFRLALQTALIKERQDQTIFNELFPLYFGKDAPPAMQPAG GGQLSPSELQQLMQQLQQLLSQLPPGPLRQLFQSMVSGQPLSNQQIRSMLANASPPHMTNPRYRDWMARQAMRELQMQRL QQALRQLLAQLREQGMREEALQAIEQAARANLQALEQQIGQQVAQQMQEQAQGQGPRQSQGRPSERELLDLPLERLDESL LPEMRTLVRKLAARLRTRLALRQRRGKTGTLDAKATIRTNQRFGGVPMLIRHRKRHLKPKLVILCDRSVSTQHVMSCMLL MIYALHDQVSRTRSFAFIDRLYDMSHYFAESRPEQAITQVLAEIRPTRSYSTDLGHALAEFCRDQLHLVDRRTTVIVLGD GRNNDNDPNLPAFEQIRRRARRIVWFATEERWKWGVYDPGSLSSDIYKYAPMCDAMHEVTTLRQLANAIDRLFLHP >Mature_476_residues MDRRITEFIAGLRAAGVRISVAESADALRAIEQAGIADRNIFRLALQTALIKERQDQTIFNELFPLYFGKDAPPAMQPAG GGQLSPSELQQLMQQLQQLLSQLPPGPLRQLFQSMVSGQPLSNQQIRSMLANASPPHMTNPRYRDWMARQAMRELQMQRL QQALRQLLAQLREQGMREEALQAIEQAARANLQALEQQIGQQVAQQMQEQAQGQGPRQSQGRPSERELLDLPLERLDESL LPEMRTLVRKLAARLRTRLALRQRRGKTGTLDAKATIRTNQRFGGVPMLIRHRKRHLKPKLVILCDRSVSTQHVMSCMLL MIYALHDQVSRTRSFAFIDRLYDMSHYFAESRPEQAITQVLAEIRPTRSYSTDLGHALAEFCRDQLHLVDRRTTVIVLGD GRNNDNDPNLPAFEQIRRRARRIVWFATEERWKWGVYDPGSLSSDIYKYAPMCDAMHEVTTLRQLANAIDRLFLHP
Specific function: Unknown
COG id: COG3552
COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54579; Mature: 54579
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRRITEFIAGLRAAGVRISVAESADALRAIEQAGIADRNIFRLALQTALIKERQDQTIF CCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH NELFPLYFGKDAPPAMQPAGGGQLSPSELQQLMQQLQQLLSQLPPGPLRQLFQSMVSGQP HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC LSNQQIRSMLANASPPHMTNPRYRDWMARQAMRELQMQRLQQALRQLLAQLREQGMREEA CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LQAIEQAARANLQALEQQIGQQVAQQMQEQAQGQGPRQSQGRPSERELLDLPLERLDESL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHH LPEMRTLVRKLAARLRTRLALRQRRGKTGTLDAKATIRTNQRFGGVPMLIRHRKRHLKPK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCC LVILCDRSVSTQHVMSCMLLMIYALHDQVSRTRSFAFIDRLYDMSHYFAESRPEQAITQV EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LAEIRPTRSYSTDLGHALAEFCRDQLHLVDRRTTVIVLGDGRNNDNDPNLPAFEQIRRRA HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHH RRIVWFATEERWKWGVYDPGSLSSDIYKYAPMCDAMHEVTTLRQLANAIDRLFLHP HHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDRRITEFIAGLRAAGVRISVAESADALRAIEQAGIADRNIFRLALQTALIKERQDQTIF CCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH NELFPLYFGKDAPPAMQPAGGGQLSPSELQQLMQQLQQLLSQLPPGPLRQLFQSMVSGQP HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC LSNQQIRSMLANASPPHMTNPRYRDWMARQAMRELQMQRLQQALRQLLAQLREQGMREEA CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LQAIEQAARANLQALEQQIGQQVAQQMQEQAQGQGPRQSQGRPSERELLDLPLERLDESL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHH LPEMRTLVRKLAARLRTRLALRQRRGKTGTLDAKATIRTNQRFGGVPMLIRHRKRHLKPK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCC LVILCDRSVSTQHVMSCMLLMIYALHDQVSRTRSFAFIDRLYDMSHYFAESRPEQAITQV EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LAEIRPTRSYSTDLGHALAEFCRDQLHLVDRRTTVIVLGDGRNNDNDPNLPAFEQIRRRA HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHH RRIVWFATEERWKWGVYDPGSLSSDIYKYAPMCDAMHEVTTLRQLANAIDRLFLHP HHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA