| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is pkn1 [H]
Identifier: 222526241
GI number: 222526241
Start: 3707472
End: 3710144
Strand: Direct
Name: pkn1 [H]
Synonym: Chy400_3005
Alternate gene names: 222526241
Gene position: 3707472-3710144 (Clockwise)
Preceding gene: 222526240
Following gene: 222526243
Centisome position: 70.36
GC content: 61.58
Gene sequence:
>2673_bases ATGGCCAAAATCCCTGCCCTGGGTCGTGAACAGCCCGAACTGAACCTGGAGCAGGTCTACGTGCCGCTGTACGTGGTCGA GCGCGAGCAGATGGAGCGTTTCGACACCTATCTGCTCGGTAAGCTGGACGGGCAGGCTGATCCGCGCCGTGATGCCTACA AGGCGGTTGAGACCAGCCGACCGGTGTTTCGCCTGTTGAGTGAACCTTCAGCTATACCCCGCGATAGACAACAAAAGAGA AAGGGCACTAACGTAAACCGCGATGAACGTCCTGAACCAACTACCACCCGCCTGCTGCTGGTCGGGCGTGCCGGTAGCGG TAAGACGACCACCCTGCACTACGGGGCGCTGATGCTGGCGCGGGCGTTTCGTAAAAAACGGGCGTTTCGTACAGGCGATG TCGCTATCCTGCGTGATCGGTTGCAGCTCTTCGTCACACGCTGCCCGTTCCCGATCTACGCCCGCCTGACCGAGCTGATG ACCTATGTGCGTGGGCGATACACCAGTGCCGATCTGGTCGGTGTACCGGCAACGGTGGTGCTCGATGCGCTCGACGAGCT GCTGCGGCGGGATGTGCCCGATCTACCGGCGGGGATGGTCAGGGACTGGGTACAAAACCGTGACACACCCTGTCTGCTGA TGTTTGACGGCCTGGACGAGACCGGTGATGCCGATGAGCGCGGTCATACCATCGATCTGATCAACAGCCTGGTACGGGCC TACCCGCAGCATCGCTATCTGCTGGCCAGTCGCCCCTTTGAGGGGCTGAGTGACCGTTTGGCGGGGTTCACCGAACGCCA TCTGCGTCCGTTGGATGCCGATGACATCAAACGTCTGCTCAACAAGTTCTTCCTGGCCCTTCGTCTGAAAGACAGTGTAG CTGATGCGTCACTCAACCCGGAGGGACTGGTACCAGAGGCGGCTGAATTATGGCGTAGCCTCGAACGGAACCCGCGCCTG TTTGATATGGCGACGAATCCGCTCTTGCTGACCAGTATGGCCGTGCTGGTTGAGGGACGCGAACCGCTGCCGGTCGAGCG GGCGAAAATCTACGAAAAGCTGGTGCGGTTGACCATTGAGGCATGGCGCAAAGCGCAATTGAGCCGTGACCGGCCAGGGG TGACGGTCAAGCTGTTTGAGGAGAGCGATGACAGTGTGCGCTTGCGGTTGCAGTTGTTGGCTGCCCACATGCTGGAGCAG GAACAGCGTGAAGTGACCCTGGCCCAGGTGCGCGAACTGCTACGTCCGATCTATCGTGCATACTATCCCGACTGGCACGA TGAGCGTTGTGATACCTACATCCGCGATCTGTTTGCCCAGCTCGCCCTCCACAGTGGGCTTGTGCAGGCCCGCGACATTG ACACCCTCTTCAGTTTTGCCCACTTTACCCTGCAGGAGTATCTGGCTGCCCGCCACTATACCGAACAGGGCCGCGATAAG GAAGCAAAGGTTAACGCCCTGATCGACCGCTGGGCAGAGCGACGCTGGCGAGAGACGATCCTGCTCGCGATTGGTCACGA AGCCACTATTGGCTCGCGCGAGATGGCGCAGATGATGATTGATCGGTTGCGCGAAACCGGCGATCCGGAGGCCATATTGC TGGCCGGTGAGGCACTGGATGAAGCCAATGCCCGCACGGTGGGCGAGCTGACCAGGCAACGGCTGGCGGTTGCCGACCGC CTGCGTGCCCTGGCTGCCCTGACCGCCGACTGGCGCACGGCGATGCATCCCGATCCGGTGGTGCGCAATCGGGCTGCAAT CATGCTCGACCGGCTCGAGGCTGATCACGACCGCCCCGGCCTGGATCTGACACAGCCCGACTACTGGGCGGCCCGCATCG AGTCCGGGGCGTTCAGTATGGGTGATGACAACGGGAAATCTGATGACGAGAAGCCTCAATTCGTTTATCACATCCGCCAG CCCTACGCCCTGGCCCGCTTTCCGGTCACCAACCGCCAGTACCTGCGCTTCCTCGACGCGCTGGCAGGGCGCGGCGGTCG GGAAGAGGTGGCGGCTGCGGAAGAGGTACGCCACCTGCTCCGGCAGCATGGCCTCTCTCCTGATCAGATGCGCCCACGAT TACGATTCTGGCCTGGTACACGCTATCGAACGGGTGAAGGCAACTGTCCGGTGGTCGCTATATCCTGGTACGCGGCCACT GCCTTTGCCCACTGGGTAGACATCTGGCTGCACAGGATCGGGGTACTGCACGACGGGGAAACGGTACGGTTGCCGACCGA AGCCGAGTGGGAGCGGGCCGCTGCCTATCCGGTGGTGATACCGGCCACTGACCCCCGTGCTGGACGGCGGGAATACCCGT GGGGAGAGTGGGATGAGGTGCCCTGCCTGCGGGCAAATACTCACGAAAGCGGGATCGGTCAGCTCTCTGTCGTCGGTGTC TTTCCCCACGGCGCGGTGGCCTGTGGTGCCGAAGACATGGCGGGCAACGTCTGGGAATGGTGCAGCACCCCGTATCTGAG GTATCCGCTGAGCGGTGATGTGGTTGCTGAGAACCTGCAAAAACGAACCAAAGATGCTAGATACGTGCTGCGCGGCGGCT CGTGGATCAGCGATCGTGGCGGCGCCCGTTGCGCCTCTCGCGGCGGCCTCAATCCCGTTAACGTCTACGCCGATTGGGGT GTGCGTCTTGCCCGTACATTCTCCTTGTCTTAA
Upstream 100 bases:
>100_bases GGAGCGTCAAAGGCAGCGGCTAGAACAATGGGAGCGCCAGAAACATGCGTCCTCAGCTCGCGAACGCTACCTGTTCAGAC TGGAGTAGGAGATGCGGCGT
Downstream 100 bases:
>100_bases TGTCTTTTTGACTTTTTGGTGTTGATCGGGTGGGCAACAACGAGCTGCCCATCTTTCTCGTCACGCTCTCTGACTGATTA TCAGCACCACCAACACCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 890; Mature: 889
Protein sequence:
>890_residues MAKIPALGREQPELNLEQVYVPLYVVEREQMERFDTYLLGKLDGQADPRRDAYKAVETSRPVFRLLSEPSAIPRDRQQKR KGTNVNRDERPEPTTTRLLLVGRAGSGKTTTLHYGALMLARAFRKKRAFRTGDVAILRDRLQLFVTRCPFPIYARLTELM TYVRGRYTSADLVGVPATVVLDALDELLRRDVPDLPAGMVRDWVQNRDTPCLLMFDGLDETGDADERGHTIDLINSLVRA YPQHRYLLASRPFEGLSDRLAGFTERHLRPLDADDIKRLLNKFFLALRLKDSVADASLNPEGLVPEAAELWRSLERNPRL FDMATNPLLLTSMAVLVEGREPLPVERAKIYEKLVRLTIEAWRKAQLSRDRPGVTVKLFEESDDSVRLRLQLLAAHMLEQ EQREVTLAQVRELLRPIYRAYYPDWHDERCDTYIRDLFAQLALHSGLVQARDIDTLFSFAHFTLQEYLAARHYTEQGRDK EAKVNALIDRWAERRWRETILLAIGHEATIGSREMAQMMIDRLRETGDPEAILLAGEALDEANARTVGELTRQRLAVADR LRALAALTADWRTAMHPDPVVRNRAAIMLDRLEADHDRPGLDLTQPDYWAARIESGAFSMGDDNGKSDDEKPQFVYHIRQ PYALARFPVTNRQYLRFLDALAGRGGREEVAAAEEVRHLLRQHGLSPDQMRPRLRFWPGTRYRTGEGNCPVVAISWYAAT AFAHWVDIWLHRIGVLHDGETVRLPTEAEWERAAAYPVVIPATDPRAGRREYPWGEWDEVPCLRANTHESGIGQLSVVGV FPHGAVACGAEDMAGNVWEWCSTPYLRYPLSGDVVAENLQKRTKDARYVLRGGSWISDRGGARCASRGGLNPVNVYADWG VRLARTFSLS
Sequences:
>Translated_890_residues MAKIPALGREQPELNLEQVYVPLYVVEREQMERFDTYLLGKLDGQADPRRDAYKAVETSRPVFRLLSEPSAIPRDRQQKR KGTNVNRDERPEPTTTRLLLVGRAGSGKTTTLHYGALMLARAFRKKRAFRTGDVAILRDRLQLFVTRCPFPIYARLTELM TYVRGRYTSADLVGVPATVVLDALDELLRRDVPDLPAGMVRDWVQNRDTPCLLMFDGLDETGDADERGHTIDLINSLVRA YPQHRYLLASRPFEGLSDRLAGFTERHLRPLDADDIKRLLNKFFLALRLKDSVADASLNPEGLVPEAAELWRSLERNPRL FDMATNPLLLTSMAVLVEGREPLPVERAKIYEKLVRLTIEAWRKAQLSRDRPGVTVKLFEESDDSVRLRLQLLAAHMLEQ EQREVTLAQVRELLRPIYRAYYPDWHDERCDTYIRDLFAQLALHSGLVQARDIDTLFSFAHFTLQEYLAARHYTEQGRDK EAKVNALIDRWAERRWRETILLAIGHEATIGSREMAQMMIDRLRETGDPEAILLAGEALDEANARTVGELTRQRLAVADR LRALAALTADWRTAMHPDPVVRNRAAIMLDRLEADHDRPGLDLTQPDYWAARIESGAFSMGDDNGKSDDEKPQFVYHIRQ PYALARFPVTNRQYLRFLDALAGRGGREEVAAAEEVRHLLRQHGLSPDQMRPRLRFWPGTRYRTGEGNCPVVAISWYAAT AFAHWVDIWLHRIGVLHDGETVRLPTEAEWERAAAYPVVIPATDPRAGRREYPWGEWDEVPCLRANTHESGIGQLSVVGV FPHGAVACGAEDMAGNVWEWCSTPYLRYPLSGDVVAENLQKRTKDARYVLRGGSWISDRGGARCASRGGLNPVNVYADWG VRLARTFSLS >Mature_889_residues AKIPALGREQPELNLEQVYVPLYVVEREQMERFDTYLLGKLDGQADPRRDAYKAVETSRPVFRLLSEPSAIPRDRQQKRK GTNVNRDERPEPTTTRLLLVGRAGSGKTTTLHYGALMLARAFRKKRAFRTGDVAILRDRLQLFVTRCPFPIYARLTELMT YVRGRYTSADLVGVPATVVLDALDELLRRDVPDLPAGMVRDWVQNRDTPCLLMFDGLDETGDADERGHTIDLINSLVRAY PQHRYLLASRPFEGLSDRLAGFTERHLRPLDADDIKRLLNKFFLALRLKDSVADASLNPEGLVPEAAELWRSLERNPRLF DMATNPLLLTSMAVLVEGREPLPVERAKIYEKLVRLTIEAWRKAQLSRDRPGVTVKLFEESDDSVRLRLQLLAAHMLEQE QREVTLAQVRELLRPIYRAYYPDWHDERCDTYIRDLFAQLALHSGLVQARDIDTLFSFAHFTLQEYLAARHYTEQGRDKE AKVNALIDRWAERRWRETILLAIGHEATIGSREMAQMMIDRLRETGDPEAILLAGEALDEANARTVGELTRQRLAVADRL RALAALTADWRTAMHPDPVVRNRAAIMLDRLEADHDRPGLDLTQPDYWAARIESGAFSMGDDNGKSDDEKPQFVYHIRQP YALARFPVTNRQYLRFLDALAGRGGREEVAAAEEVRHLLRQHGLSPDQMRPRLRFWPGTRYRTGEGNCPVVAISWYAATA FAHWVDIWLHRIGVLHDGETVRLPTEAEWERAAAYPVVIPATDPRAGRREYPWGEWDEVPCLRANTHESGIGQLSVVGVF PHGAVACGAEDMAGNVWEWCSTPYLRYPLSGDVVAENLQKRTKDARYVLRGGSWISDRGGARCASRGGLNPVNVYADWGV RLARTFSLS
Specific function: Together with the serine/threonine kinase pknD, may play a role in the specific interactions with host proteins during intracellular growth [H]
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI194248087, Length=294, Percent_Identity=28.9115646258503, Blast_Score=72, Evalue=3e-12, Organism=Homo sapiens, GI194248088, Length=304, Percent_Identity=28.6184210526316, Blast_Score=69, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016187 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR005532 [H]
Pfam domain/function: PF03781 DUF323; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 101329; Mature: 101197
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: PS50837 NACHT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIPALGREQPELNLEQVYVPLYVVEREQMERFDTYLLGKLDGQADPRRDAYKAVETSR CCCCCCCCCCCCCCCHHHEEEEHEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC PVFRLLSEPSAIPRDRQQKRKGTNVNRDERPEPTTTRLLLVGRAGSGKTTTLHYGALMLA HHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEHHHHHHHH RAFRKKRAFRTGDVAILRDRLQLFVTRCPFPIYARLTELMTYVRGRYTSADLVGVPATVV HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH LDALDELLRRDVPDLPAGMVRDWVQNRDTPCLLMFDGLDETGDADERGHTIDLINSLVRA HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH YPQHRYLLASRPFEGLSDRLAGFTERHLRPLDADDIKRLLNKFFLALRLKDSVADASLNP CCCCCEEEECCCCCHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC EGLVPEAAELWRSLERNPRLFDMATNPLLLTSMAVLVEGREPLPVERAKIYEKLVRLTIE CCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH AWRKAQLSRDRPGVTVKLFEESDDSVRLRLQLLAAHMLEQEQREVTLAQVRELLRPIYRA HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYPDWHDERCDTYIRDLFAQLALHSGLVQARDIDTLFSFAHFTLQEYLAARHYTEQGRDK HCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EAKVNALIDRWAERRWRETILLAIGHEATIGSREMAQMMIDRLRETGDPEAILLAGEALD HHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHC EANARTVGELTRQRLAVADRLRALAALTADWRTAMHPDPVVRNRAAIMLDRLEADHDRPG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC LDLTQPDYWAARIESGAFSMGDDNGKSDDEKPQFVYHIRQPYALARFPVTNRQYLRFLDA CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHH LAGRGGREEVAAAEEVRHLLRQHGLSPDQMRPRLRFWPGTRYRTGEGNCPVVAISWYAAT HHCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCEEECCCCCEECCCCCCCEEEEEHHHHH AFAHWVDIWLHRIGVLHDGETVRLPTEAEWERAAAYPVVIPATDPRAGRREYPWGEWDEV HHHHHHHHHHHHHCEEECCCEEECCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC PCLRANTHESGIGQLSVVGVFPHGAVACGAEDMAGNVWEWCSTPYLRYPLSGDVVAENLQ CCEECCCCCCCCCCEEEEEECCCCCEECCCHHHCCCHHHHHCCCCEECCCCCHHHHHHHH KRTKDARYVLRGGSWISDRGGARCASRGGLNPVNVYADWGVRLARTFSLS HHHHHHHEEEECCCEECCCCCCCHHHCCCCCCEEEEECCCEEEHHEECCC >Mature Secondary Structure AKIPALGREQPELNLEQVYVPLYVVEREQMERFDTYLLGKLDGQADPRRDAYKAVETSR CCCCCCCCCCCCCCHHHEEEEHEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC PVFRLLSEPSAIPRDRQQKRKGTNVNRDERPEPTTTRLLLVGRAGSGKTTTLHYGALMLA HHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEHHHHHHHH RAFRKKRAFRTGDVAILRDRLQLFVTRCPFPIYARLTELMTYVRGRYTSADLVGVPATVV HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH LDALDELLRRDVPDLPAGMVRDWVQNRDTPCLLMFDGLDETGDADERGHTIDLINSLVRA HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH YPQHRYLLASRPFEGLSDRLAGFTERHLRPLDADDIKRLLNKFFLALRLKDSVADASLNP CCCCCEEEECCCCCHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC EGLVPEAAELWRSLERNPRLFDMATNPLLLTSMAVLVEGREPLPVERAKIYEKLVRLTIE CCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH AWRKAQLSRDRPGVTVKLFEESDDSVRLRLQLLAAHMLEQEQREVTLAQVRELLRPIYRA HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YYPDWHDERCDTYIRDLFAQLALHSGLVQARDIDTLFSFAHFTLQEYLAARHYTEQGRDK HCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EAKVNALIDRWAERRWRETILLAIGHEATIGSREMAQMMIDRLRETGDPEAILLAGEALD HHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHC EANARTVGELTRQRLAVADRLRALAALTADWRTAMHPDPVVRNRAAIMLDRLEADHDRPG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC LDLTQPDYWAARIESGAFSMGDDNGKSDDEKPQFVYHIRQPYALARFPVTNRQYLRFLDA CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHH LAGRGGREEVAAAEEVRHLLRQHGLSPDQMRPRLRFWPGTRYRTGEGNCPVVAISWYAAT HHCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCEEECCCCCEECCCCCCCEEEEEHHHHH AFAHWVDIWLHRIGVLHDGETVRLPTEAEWERAAAYPVVIPATDPRAGRREYPWGEWDEV HHHHHHHHHHHHHCEEECCCEEECCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC PCLRANTHESGIGQLSVVGVFPHGAVACGAEDMAGNVWEWCSTPYLRYPLSGDVVAENLQ CCEECCCCCCCCCCEEEEEECCCCCEECCCHHHCCCHHHHHCCCCEECCCCCHHHHHHHH KRTKDARYVLRGGSWISDRGGARCASRGGLNPVNVYADWGVRLARTFSLS HHHHHHHEEEECCCEECCCCCCCHHHCCCCCCEEEEECCCEEEHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10684935 [H]