| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526215
Identifier: 222526215
GI number: 222526215
Start: 3674624
End: 3675535
Strand: Reverse
Name: 222526215
Synonym: Chy400_2976
Alternate gene names: NA
Gene position: 3675535-3674624 (Counterclockwise)
Preceding gene: 222526216
Following gene: 222526214
Centisome position: 69.76
GC content: 58.33
Gene sequence:
>912_bases GTGCGTCTGCTTGCACTTATGCTAATGACAATCCTCCTCGCCGGTTGTACAACACCGATGCCGCCAACCCCAACCCCACC ACCAACAGCAACTGCAACTCCTACCCCCATCCCAACCCCGACCGCCACACCCACACCGGTACCAACACCAACGCCGGCTG CCGAACCGGCAGGAACGGCTATCCCGGCAGCGATTCGCCAGACGGCAAATATCGAGACGTATCGGATGCAATTGTCGCTC CGCGGCAGTGGTCTGGTCGGTGGCTTTAATCTAGGCAATACCACAACCGACCTGCTCTCACTTGATGGTCAGTTCGCCGG CGCTGATGTCTCGTTTACCCTGCGCGGTTTCCTGGCCGCATTCCTCGGCGCCGATGTCACCCGTGGTCTACAGGCGATGA CGGTCGGTGGTGTCAGCTATGTACGCGGCCCGCTCACCTTCCTTGGGGCGCCTGATGATGTCTGGTATCGCCTGACGCCT GAGCAGAGTGTGATTGCTACCCCACCAACCCAGGTTGATACGACACTCAGTGCGGTGAACAGAGCGGGTGCCGATTTCAG TCGTTTTACGATTGGTACGACCGCTGAACGTGATGGTGTGCAGTGTCAGGAGTATGTCGGCGACCGTGAGGCGACAACAG CCCTCTTTGCCAGTCTTGGCGCCATCGGTCTACCAACCCAGTTACCTGATAGCACCGTTACCGATGCCGCTGCCCAGATT TGGGTGTGTGAGGATGGCTATCTACGGCAATTGACTGTAACCTTTAGTGGTACGGCAACCGATGCCCAGGGCCAGGCGCA ACCATTCTCGTTTGCGCTTGATGTGCAATTGAGCGATATTAATGAGGATATTCGCCTGACCCCACCTGCTGATGCACGCG ACCTGCCCACGCCTGGAAGCGGTACGCCGTAA
Upstream 100 bases:
>100_bases TTTTATCTTGTTGGCCGGTATACATCGCTGCTATAATCAGCATGCGCATGACTTGTCGTGTTTTTCTGGTCATGCGTTAG AGTGGAAAGGAAGGTTCTGC
Downstream 100 bases:
>100_bases AAAGACTGCAACGCACGACCACATTGCGTCGTATTGTATAAGTAGGAAACACATAGATCGCCTGCATCAACACGACAACC TACAGACAGGTAGTGACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MRLLALMLMTILLAGCTTPMPPTPTPPPTATATPTPIPTPTATPTPVPTPTPAAEPAGTAIPAAIRQTANIETYRMQLSL RGSGLVGGFNLGNTTTDLLSLDGQFAGADVSFTLRGFLAAFLGADVTRGLQAMTVGGVSYVRGPLTFLGAPDDVWYRLTP EQSVIATPPTQVDTTLSAVNRAGADFSRFTIGTTAERDGVQCQEYVGDREATTALFASLGAIGLPTQLPDSTVTDAAAQI WVCEDGYLRQLTVTFSGTATDAQGQAQPFSFALDVQLSDINEDIRLTPPADARDLPTPGSGTP
Sequences:
>Translated_303_residues MRLLALMLMTILLAGCTTPMPPTPTPPPTATATPTPIPTPTATPTPVPTPTPAAEPAGTAIPAAIRQTANIETYRMQLSL RGSGLVGGFNLGNTTTDLLSLDGQFAGADVSFTLRGFLAAFLGADVTRGLQAMTVGGVSYVRGPLTFLGAPDDVWYRLTP EQSVIATPPTQVDTTLSAVNRAGADFSRFTIGTTAERDGVQCQEYVGDREATTALFASLGAIGLPTQLPDSTVTDAAAQI WVCEDGYLRQLTVTFSGTATDAQGQAQPFSFALDVQLSDINEDIRLTPPADARDLPTPGSGTP >Mature_303_residues MRLLALMLMTILLAGCTTPMPPTPTPPPTATATPTPIPTPTATPTPVPTPTPAAEPAGTAIPAAIRQTANIETYRMQLSL RGSGLVGGFNLGNTTTDLLSLDGQFAGADVSFTLRGFLAAFLGADVTRGLQAMTVGGVSYVRGPLTFLGAPDDVWYRLTP EQSVIATPPTQVDTTLSAVNRAGADFSRFTIGTTAERDGVQCQEYVGDREATTALFASLGAIGLPTQLPDSTVTDAAAQI WVCEDGYLRQLTVTFSGTATDAQGQAQPFSFALDVQLSDINEDIRLTPPADARDLPTPGSGTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31512; Mature: 31512
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLALMLMTILLAGCTTPMPPTPTPPPTATATPTPIPTPTATPTPVPTPTPAAEPAGTA CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH IPAAIRQTANIETYRMQLSLRGSGLVGGFNLGNTTTDLLSLDGQFAGADVSFTLRGFLAA HHHHHHHHCCCEEEEEEEEECCCCEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHH FLGADVTRGLQAMTVGGVSYVRGPLTFLGAPDDVWYRLTPEQSVIATPPTQVDTTLSAVN HHHHHHHHCHHEEEECCHHHHCCCEEEECCCCCCEEEECCCCCEEECCCCHHHHHHHHHH RAGADFSRFTIGTTAERDGVQCQEYVGDREATTALFASLGAIGLPTQLPDSTVTDAAAQI HCCCCCCEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEE WVCEDGYLRQLTVTFSGTATDAQGQAQPFSFALDVQLSDINEDIRLTPPADARDLPTPGS EEECCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCEEECCCCCCCCCCCCCC GTP CCC >Mature Secondary Structure MRLLALMLMTILLAGCTTPMPPTPTPPPTATATPTPIPTPTATPTPVPTPTPAAEPAGTA CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH IPAAIRQTANIETYRMQLSLRGSGLVGGFNLGNTTTDLLSLDGQFAGADVSFTLRGFLAA HHHHHHHHCCCEEEEEEEEECCCCEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHH FLGADVTRGLQAMTVGGVSYVRGPLTFLGAPDDVWYRLTPEQSVIATPPTQVDTTLSAVN HHHHHHHHCHHEEEECCHHHHCCCEEEECCCCCCEEEECCCCCEEECCCCHHHHHHHHHH RAGADFSRFTIGTTAERDGVQCQEYVGDREATTALFASLGAIGLPTQLPDSTVTDAAAQI HCCCCCCEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEE WVCEDGYLRQLTVTFSGTATDAQGQAQPFSFALDVQLSDINEDIRLTPPADARDLPTPGS EEECCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCEEECCCCCCCCCCCCCC GTP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA