| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is icfG [H]
Identifier: 222526206
GI number: 222526206
Start: 3664169
End: 3665521
Strand: Direct
Name: icfG [H]
Synonym: Chy400_2967
Alternate gene names: 222526206
Gene position: 3664169-3665521 (Clockwise)
Preceding gene: 222526205
Following gene: 222526207
Centisome position: 69.54
GC content: 47.23
Gene sequence:
>1353_bases ATGAAATCACAGGACATTCAATCATTCAACGAGTTATTGAAACAGCTTGATATTGAAAACGACCAGGTACGCTTGCGTTT CACCTTGCGAATGCTCAATATTTTAGTGTTAACGCTGACCGTTATAGCGTTACTCATTATGCTTATTCCACCCTTCTCGC TACCGGTAGCGTATATACTGGTTGCAGTTTCGATTGCAATAAATGGGATTATTGAATGGTTAATTCGCATAAACCGTGAA GTAGTAGGAGCAAGACTCTTTGTTGGTTGGACAAACATAGGGGTCGTTGTGTTCATGCTGATCAATACAGTCAGGCTTGA CGATATTGGCATGACAATGTTTGCGGAAATCACCCCATTATTTGTAATTTTGAGCGGGCTGTTATTGGGATGGGGTCTTG CCGGTTTTGTTGCTATCGTCAATCTTGTTATTATCTTTCTCACCTATGTCTGGTATTTTGCAAACAGTGGTACTACACGT GGTGTATTTGAAGAGGCGACCGGTTTGTTCATACCGGTCTTCCTCTATACCGCGTTGGTGTGGGCAGCAATTTCATTCTA TCAGTATCAACTAACGACATCGCGTTACCGGCTCAATCAGGCCCGTTCGCGTCTCATTCAGGATAAGATATTGCACCATG ATCTCGAAATTGCCCGCTCGCTTCAGCAACGTCTTTTCCCACCATCACCACCACTGTTCGGGAATATCCGTATTGTTGCG TATTCTGAACCTGCCCGCGAGACGAGTGGCGATTTTTATGATTTTGTCCAGTTGTCAGATGGGCGTTGGGCGATTGTTGT TGCTGATGTTACCGGTAAGAGTATTGCCGCTGCTATGGTCATGGTGATGGCGCGCTCAATTCTACGCTCTTACATCACCA CTGAACAATCACCGGCAGCGATACTGCGTGCCGCTAACAATGCACTCTACCGTGATGGCGTCGGCTCGCAATATGTCACT GTTTTCCTTGGCATCCTCGACTCATCCACTAATATGATTACATTTGCCACTGCCGGTCATCCCTTTCCTTATCTCCGCCG AAATGGCCAGATTCAAGAGATCGGTTATGGTAGCCTCCCCCTTGGTGCTCGTCTTGATCGGGAATATTGTGAGACGACGC TGCAATTCCAGACTGGCGATCAGCTCTTTCTTCTCACCGATGGGTTTTATGAGACGCGAAATGCGCAGCGCAAAATGTTT GGCTTCGAGCAGTTGATGATAGCGATCGACCAGTCCGATCCGGCTGATCCGCAACGTGCACTCGATCATTTGTTGGCGGT CGTGAGCCAGTTTCGCGGCGATGCCGAGCAAGATGATGATATGACGGCGATTATTATCCAGGTACTGGCGTAA
Upstream 100 bases:
>100_bases CAGCTTGAAGATTTGGAGCGGCAGGCGGCTGCTCCGGTCTGGAGCTGATAATACAGTCTTCTCACATTGATTCTTTCTAT GGAGAGCATTCGCAGGGTAT
Downstream 100 bases:
>100_bases ATGCATGCTGAGCCTGCTCCCCTTTGAAGCAGCGTACTGGCAACGAGTCTATTCCCGCCTGATCGCTCTATGTGACCCAC TCCCTTCCGTTATCCGCTGT
Product: protein serine/threonine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MKSQDIQSFNELLKQLDIENDQVRLRFTLRMLNILVLTLTVIALLIMLIPPFSLPVAYILVAVSIAINGIIEWLIRINRE VVGARLFVGWTNIGVVVFMLINTVRLDDIGMTMFAEITPLFVILSGLLLGWGLAGFVAIVNLVIIFLTYVWYFANSGTTR GVFEEATGLFIPVFLYTALVWAAISFYQYQLTTSRYRLNQARSRLIQDKILHHDLEIARSLQQRLFPPSPPLFGNIRIVA YSEPARETSGDFYDFVQLSDGRWAIVVADVTGKSIAAAMVMVMARSILRSYITTEQSPAAILRAANNALYRDGVGSQYVT VFLGILDSSTNMITFATAGHPFPYLRRNGQIQEIGYGSLPLGARLDREYCETTLQFQTGDQLFLLTDGFYETRNAQRKMF GFEQLMIAIDQSDPADPQRALDHLLAVVSQFRGDAEQDDDMTAIIIQVLA
Sequences:
>Translated_450_residues MKSQDIQSFNELLKQLDIENDQVRLRFTLRMLNILVLTLTVIALLIMLIPPFSLPVAYILVAVSIAINGIIEWLIRINRE VVGARLFVGWTNIGVVVFMLINTVRLDDIGMTMFAEITPLFVILSGLLLGWGLAGFVAIVNLVIIFLTYVWYFANSGTTR GVFEEATGLFIPVFLYTALVWAAISFYQYQLTTSRYRLNQARSRLIQDKILHHDLEIARSLQQRLFPPSPPLFGNIRIVA YSEPARETSGDFYDFVQLSDGRWAIVVADVTGKSIAAAMVMVMARSILRSYITTEQSPAAILRAANNALYRDGVGSQYVT VFLGILDSSTNMITFATAGHPFPYLRRNGQIQEIGYGSLPLGARLDREYCETTLQFQTGDQLFLLTDGFYETRNAQRKMF GFEQLMIAIDQSDPADPQRALDHLLAVVSQFRGDAEQDDDMTAIIIQVLA >Mature_450_residues MKSQDIQSFNELLKQLDIENDQVRLRFTLRMLNILVLTLTVIALLIMLIPPFSLPVAYILVAVSIAINGIIEWLIRINRE VVGARLFVGWTNIGVVVFMLINTVRLDDIGMTMFAEITPLFVILSGLLLGWGLAGFVAIVNLVIIFLTYVWYFANSGTTR GVFEEATGLFIPVFLYTALVWAAISFYQYQLTTSRYRLNQARSRLIQDKILHHDLEIARSLQQRLFPPSPPLFGNIRIVA YSEPARETSGDFYDFVQLSDGRWAIVVADVTGKSIAAAMVMVMARSILRSYITTEQSPAAILRAANNALYRDGVGSQYVT VFLGILDSSTNMITFATAGHPFPYLRRNGQIQEIGYGSLPLGARLDREYCETTLQFQTGDQLFLLTDGFYETRNAQRKMF GFEQLMIAIDQSDPADPQRALDHLLAVVSQFRGDAEQDDDMTAIIIQVLA
Specific function: Involved in cross-regulation of inorganic carbon and glucose metabolisms [H]
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003660 - InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF00672 HAMP; PF07228 SpoIIE [H]
EC number: NA
Molecular weight: Translated: 50539; Mature: 50539
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSQDIQSFNELLKQLDIENDQVRLRFTLRMLNILVLTLTVIALLIMLIPPFSLPVAYIL CCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VAVSIAINGIIEWLIRINREVVGARLFVGWTNIGVVVFMLINTVRLDDIGMTMFAEITPL HHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH FVILSGLLLGWGLAGFVAIVNLVIIFLTYVWYFANSGTTRGVFEEATGLFIPVFLYTALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHH WAAISFYQYQLTTSRYRLNQARSRLIQDKILHHDLEIARSLQQRLFPPSPPLFGNIRIVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE YSEPARETSGDFYDFVQLSDGRWAIVVADVTGKSIAAAMVMVMARSILRSYITTEQSPAA ECCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH ILRAANNALYRDGVGSQYVTVFLGILDSSTNMITFATAGHPFPYLRRNGQIQEIGYGSLP HHHHHCCHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCCEEECCCCCCC LGARLDREYCETTLQFQTGDQLFLLTDGFYETRNAQRKMFGFEQLMIAIDQSDPADPQRA CCCCCCHHHHHHHHEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHH LDHLLAVVSQFRGDAEQDDDMTAIIIQVLA HHHHHHHHHHHCCCCCCCCCHHHHHHHHHC >Mature Secondary Structure MKSQDIQSFNELLKQLDIENDQVRLRFTLRMLNILVLTLTVIALLIMLIPPFSLPVAYIL CCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VAVSIAINGIIEWLIRINREVVGARLFVGWTNIGVVVFMLINTVRLDDIGMTMFAEITPL HHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH FVILSGLLLGWGLAGFVAIVNLVIIFLTYVWYFANSGTTRGVFEEATGLFIPVFLYTALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHH WAAISFYQYQLTTSRYRLNQARSRLIQDKILHHDLEIARSLQQRLFPPSPPLFGNIRIVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE YSEPARETSGDFYDFVQLSDGRWAIVVADVTGKSIAAAMVMVMARSILRSYITTEQSPAA ECCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH ILRAANNALYRDGVGSQYVTVFLGILDSSTNMITFATAGHPFPYLRRNGQIQEIGYGSLP HHHHHCCHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCCEEECCCCCCC LGARLDREYCETTLQFQTGDQLFLLTDGFYETRNAQRKMFGFEQLMIAIDQSDPADPQRA CCCCCCHHHHHHHHEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHH LDHLLAVVSQFRGDAEQDDDMTAIIIQVLA HHHHHHHHHHHCCCCCCCCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8075401; 8905231 [H]