Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is icfG [H]

Identifier: 222526206

GI number: 222526206

Start: 3664169

End: 3665521

Strand: Direct

Name: icfG [H]

Synonym: Chy400_2967

Alternate gene names: 222526206

Gene position: 3664169-3665521 (Clockwise)

Preceding gene: 222526205

Following gene: 222526207

Centisome position: 69.54

GC content: 47.23

Gene sequence:

>1353_bases
ATGAAATCACAGGACATTCAATCATTCAACGAGTTATTGAAACAGCTTGATATTGAAAACGACCAGGTACGCTTGCGTTT
CACCTTGCGAATGCTCAATATTTTAGTGTTAACGCTGACCGTTATAGCGTTACTCATTATGCTTATTCCACCCTTCTCGC
TACCGGTAGCGTATATACTGGTTGCAGTTTCGATTGCAATAAATGGGATTATTGAATGGTTAATTCGCATAAACCGTGAA
GTAGTAGGAGCAAGACTCTTTGTTGGTTGGACAAACATAGGGGTCGTTGTGTTCATGCTGATCAATACAGTCAGGCTTGA
CGATATTGGCATGACAATGTTTGCGGAAATCACCCCATTATTTGTAATTTTGAGCGGGCTGTTATTGGGATGGGGTCTTG
CCGGTTTTGTTGCTATCGTCAATCTTGTTATTATCTTTCTCACCTATGTCTGGTATTTTGCAAACAGTGGTACTACACGT
GGTGTATTTGAAGAGGCGACCGGTTTGTTCATACCGGTCTTCCTCTATACCGCGTTGGTGTGGGCAGCAATTTCATTCTA
TCAGTATCAACTAACGACATCGCGTTACCGGCTCAATCAGGCCCGTTCGCGTCTCATTCAGGATAAGATATTGCACCATG
ATCTCGAAATTGCCCGCTCGCTTCAGCAACGTCTTTTCCCACCATCACCACCACTGTTCGGGAATATCCGTATTGTTGCG
TATTCTGAACCTGCCCGCGAGACGAGTGGCGATTTTTATGATTTTGTCCAGTTGTCAGATGGGCGTTGGGCGATTGTTGT
TGCTGATGTTACCGGTAAGAGTATTGCCGCTGCTATGGTCATGGTGATGGCGCGCTCAATTCTACGCTCTTACATCACCA
CTGAACAATCACCGGCAGCGATACTGCGTGCCGCTAACAATGCACTCTACCGTGATGGCGTCGGCTCGCAATATGTCACT
GTTTTCCTTGGCATCCTCGACTCATCCACTAATATGATTACATTTGCCACTGCCGGTCATCCCTTTCCTTATCTCCGCCG
AAATGGCCAGATTCAAGAGATCGGTTATGGTAGCCTCCCCCTTGGTGCTCGTCTTGATCGGGAATATTGTGAGACGACGC
TGCAATTCCAGACTGGCGATCAGCTCTTTCTTCTCACCGATGGGTTTTATGAGACGCGAAATGCGCAGCGCAAAATGTTT
GGCTTCGAGCAGTTGATGATAGCGATCGACCAGTCCGATCCGGCTGATCCGCAACGTGCACTCGATCATTTGTTGGCGGT
CGTGAGCCAGTTTCGCGGCGATGCCGAGCAAGATGATGATATGACGGCGATTATTATCCAGGTACTGGCGTAA

Upstream 100 bases:

>100_bases
CAGCTTGAAGATTTGGAGCGGCAGGCGGCTGCTCCGGTCTGGAGCTGATAATACAGTCTTCTCACATTGATTCTTTCTAT
GGAGAGCATTCGCAGGGTAT

Downstream 100 bases:

>100_bases
ATGCATGCTGAGCCTGCTCCCCTTTGAAGCAGCGTACTGGCAACGAGTCTATTCCCGCCTGATCGCTCTATGTGACCCAC
TCCCTTCCGTTATCCGCTGT

Product: protein serine/threonine phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MKSQDIQSFNELLKQLDIENDQVRLRFTLRMLNILVLTLTVIALLIMLIPPFSLPVAYILVAVSIAINGIIEWLIRINRE
VVGARLFVGWTNIGVVVFMLINTVRLDDIGMTMFAEITPLFVILSGLLLGWGLAGFVAIVNLVIIFLTYVWYFANSGTTR
GVFEEATGLFIPVFLYTALVWAAISFYQYQLTTSRYRLNQARSRLIQDKILHHDLEIARSLQQRLFPPSPPLFGNIRIVA
YSEPARETSGDFYDFVQLSDGRWAIVVADVTGKSIAAAMVMVMARSILRSYITTEQSPAAILRAANNALYRDGVGSQYVT
VFLGILDSSTNMITFATAGHPFPYLRRNGQIQEIGYGSLPLGARLDREYCETTLQFQTGDQLFLLTDGFYETRNAQRKMF
GFEQLMIAIDQSDPADPQRALDHLLAVVSQFRGDAEQDDDMTAIIIQVLA

Sequences:

>Translated_450_residues
MKSQDIQSFNELLKQLDIENDQVRLRFTLRMLNILVLTLTVIALLIMLIPPFSLPVAYILVAVSIAINGIIEWLIRINRE
VVGARLFVGWTNIGVVVFMLINTVRLDDIGMTMFAEITPLFVILSGLLLGWGLAGFVAIVNLVIIFLTYVWYFANSGTTR
GVFEEATGLFIPVFLYTALVWAAISFYQYQLTTSRYRLNQARSRLIQDKILHHDLEIARSLQQRLFPPSPPLFGNIRIVA
YSEPARETSGDFYDFVQLSDGRWAIVVADVTGKSIAAAMVMVMARSILRSYITTEQSPAAILRAANNALYRDGVGSQYVT
VFLGILDSSTNMITFATAGHPFPYLRRNGQIQEIGYGSLPLGARLDREYCETTLQFQTGDQLFLLTDGFYETRNAQRKMF
GFEQLMIAIDQSDPADPQRALDHLLAVVSQFRGDAEQDDDMTAIIIQVLA
>Mature_450_residues
MKSQDIQSFNELLKQLDIENDQVRLRFTLRMLNILVLTLTVIALLIMLIPPFSLPVAYILVAVSIAINGIIEWLIRINRE
VVGARLFVGWTNIGVVVFMLINTVRLDDIGMTMFAEITPLFVILSGLLLGWGLAGFVAIVNLVIIFLTYVWYFANSGTTR
GVFEEATGLFIPVFLYTALVWAAISFYQYQLTTSRYRLNQARSRLIQDKILHHDLEIARSLQQRLFPPSPPLFGNIRIVA
YSEPARETSGDFYDFVQLSDGRWAIVVADVTGKSIAAAMVMVMARSILRSYITTEQSPAAILRAANNALYRDGVGSQYVT
VFLGILDSSTNMITFATAGHPFPYLRRNGQIQEIGYGSLPLGARLDREYCETTLQFQTGDQLFLLTDGFYETRNAQRKMF
GFEQLMIAIDQSDPADPQRALDHLLAVVSQFRGDAEQDDDMTAIIIQVLA

Specific function: Involved in cross-regulation of inorganic carbon and glucose metabolisms [H]

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PP2C-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003660
- InterPro:   IPR001932
- InterPro:   IPR010822 [H]

Pfam domain/function: PF00672 HAMP; PF07228 SpoIIE [H]

EC number: NA

Molecular weight: Translated: 50539; Mature: 50539

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQDIQSFNELLKQLDIENDQVRLRFTLRMLNILVLTLTVIALLIMLIPPFSLPVAYIL
CCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VAVSIAINGIIEWLIRINREVVGARLFVGWTNIGVVVFMLINTVRLDDIGMTMFAEITPL
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FVILSGLLLGWGLAGFVAIVNLVIIFLTYVWYFANSGTTRGVFEEATGLFIPVFLYTALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHH
WAAISFYQYQLTTSRYRLNQARSRLIQDKILHHDLEIARSLQQRLFPPSPPLFGNIRIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
YSEPARETSGDFYDFVQLSDGRWAIVVADVTGKSIAAAMVMVMARSILRSYITTEQSPAA
ECCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILRAANNALYRDGVGSQYVTVFLGILDSSTNMITFATAGHPFPYLRRNGQIQEIGYGSLP
HHHHHCCHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCCEEECCCCCCC
LGARLDREYCETTLQFQTGDQLFLLTDGFYETRNAQRKMFGFEQLMIAIDQSDPADPQRA
CCCCCCHHHHHHHHEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHH
LDHLLAVVSQFRGDAEQDDDMTAIIIQVLA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHC
>Mature Secondary Structure
MKSQDIQSFNELLKQLDIENDQVRLRFTLRMLNILVLTLTVIALLIMLIPPFSLPVAYIL
CCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VAVSIAINGIIEWLIRINREVVGARLFVGWTNIGVVVFMLINTVRLDDIGMTMFAEITPL
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FVILSGLLLGWGLAGFVAIVNLVIIFLTYVWYFANSGTTRGVFEEATGLFIPVFLYTALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHH
WAAISFYQYQLTTSRYRLNQARSRLIQDKILHHDLEIARSLQQRLFPPSPPLFGNIRIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
YSEPARETSGDFYDFVQLSDGRWAIVVADVTGKSIAAAMVMVMARSILRSYITTEQSPAA
ECCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILRAANNALYRDGVGSQYVTVFLGILDSSTNMITFATAGHPFPYLRRNGQIQEIGYGSLP
HHHHHCCHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCCEEECCCCCCC
LGARLDREYCETTLQFQTGDQLFLLTDGFYETRNAQRKMFGFEQLMIAIDQSDPADPQRA
CCCCCCHHHHHHHHEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCCHHHH
LDHLLAVVSQFRGDAEQDDDMTAIIIQVLA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8075401; 8905231 [H]