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The map label for this gene is yraN [C]

Identifier: 222526158

GI number: 222526158

Start: 3603716

End: 3604078

Strand: Direct

Name: yraN [C]

Synonym: Chy400_2915

Alternate gene names: 222526158

Gene position: 3603716-3604078 (Clockwise)

Preceding gene: 222526157

Following gene: 222526160

Centisome position: 68.4

GC content: 56.75

Gene sequence:

>363_bases
ATGCCTACACCTAAGCGTCGGTTAGGCGAAGTTGGTGAACAGGCGGCAGCAGCGTATCTGGAACGATGCGGATATACAAT
CATCGCTCGTAACTGGCGCTGCCGGGATGGTGAGATCGATCTGGTTGCCCGTGAAGGCGACCAGATCGTTTTTGTTGAGG
TTCGTACCCGTCACGATCAGCACGCGCTGGAGACGATTACGCTGGCAAAACAGCAACGTCTGGTTGCGCTGGCGTATCAC
TATCTTTCGGCGCATGATCTACCCGCCACGACCCGCTGGCGGATCGACGTGATCGCGCTTACCGCTCGCGGTGGGAGGAT
TGTTGATTACGATCACGTGATTGCCGCTGTGGGTGAGGATTAG

Upstream 100 bases:

>100_bases
GAACAGGCCAACATGGTACTGCTCTCGACACCGCGCCAGCCGCAGTATCTGGCGTTTGCCCTGCTCGGCGAGCTGGAACG
GCACGATGTCTGGCGAAAGT

Downstream 100 bases:

>100_bases
CGGTCGGCAAGAACAGCAGCCCGGCGTTGGGGACGGTGGAAGCGGTGGGGTGGCCTGTTATCGGCGGCAGTAGGGGCACG
GTATGCCGTGCCCCGACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MPTPKRRLGEVGEQAAAAYLERCGYTIIARNWRCRDGEIDLVAREGDQIVFVEVRTRHDQHALETITLAKQQRLVALAYH
YLSAHDLPATTRWRIDVIALTARGGRIVDYDHVIAAVGED

Sequences:

>Translated_120_residues
MPTPKRRLGEVGEQAAAAYLERCGYTIIARNWRCRDGEIDLVAREGDQIVFVEVRTRHDQHALETITLAKQQRLVALAYH
YLSAHDLPATTRWRIDVIALTARGGRIVDYDHVIAAVGED
>Mature_119_residues
PTPKRRLGEVGEQAAAAYLERCGYTIIARNWRCRDGEIDLVAREGDQIVFVEVRTRHDQHALETITLAKQQRLVALAYHY
LSAHDLPATTRWRIDVIALTARGGRIVDYDHVIAAVGED

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2698_CHLAA (A9WJJ9)

Other databases:

- EMBL:   CP000909
- RefSeq:   YP_001636292.1
- ProteinModelPortal:   A9WJJ9
- GeneID:   5827169
- GenomeReviews:   CP000909_GR
- KEGG:   cau:Caur_2698
- HOGENOM:   HBG710155
- OMA:   EVIFIEV
- ProtClustDB:   PRK14678
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13566; Mature: 13434

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPKRRLGEVGEQAAAAYLERCGYTIIARNWRCRDGEIDLVAREGDQIVFVEVRTRHDQ
CCCCHHHHHHHHHHHHHHHHHHCCCEEEECCEECCCCCEEEEEECCCEEEEEEEECCCCH
HALETITLAKQQRLVALAYHYLSAHDLPATTRWRIDVIALTARGGRIVDYDHVIAAVGED
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCEEEEHHHEEEEECCC
>Mature Secondary Structure 
PTPKRRLGEVGEQAAAAYLERCGYTIIARNWRCRDGEIDLVAREGDQIVFVEVRTRHDQ
CCCHHHHHHHHHHHHHHHHHHCCCEEEECCEECCCCCEEEEEECCCEEEEEEEECCCCH
HALETITLAKQQRLVALAYHYLSAHDLPATTRWRIDVIALTARGGRIVDYDHVIAAVGED
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCEEEEHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA