| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526142
Identifier: 222526142
GI number: 222526142
Start: 3583410
End: 3584165
Strand: Reverse
Name: 222526142
Synonym: Chy400_2899
Alternate gene names: NA
Gene position: 3584165-3583410 (Counterclockwise)
Preceding gene: 222526143
Following gene: 222526133
Centisome position: 68.02
GC content: 59.66
Gene sequence:
>756_bases ATGGTATCTCCATGGCGCTTACGACCACGCTGTAGCGGTGGCGCAGGCGTTATTCAAACGGCAAGCGGCTTGCGTCTGCT TCGACCACCCGGCCCTGCCAACCGCTATCGAAATGCGCAGATCGATGATTTTGGGCAGTGGCCCGGTAACCCACGAGCGT TGCAGCCACCGTTTACCCTTCGTCTGCGTGCACGCACGTCACATCCGGCAGATCGGTTGGTTGGTACTGCCGGGTTTGGC TTGTGGAGCTATCCATGGGCCTGGCCGCTTCGTATGCCGCAGGCGGTCTGGTTCTTTTTCGGTGCGCCACCACACGATAT GCCACTGGCAATCGGCATACCCGGCCACGGCTGGAAAGCCGCCGTCGTTGATACAGGTCGTCCGGCAGCCCGCAAATGGA TACCGCTTGCCCCGGTCATTGTCCCGCTGCTCAACATTCCACCGCTGTACCGCCGCATCTGGCCATGCATCCAGCGCGAT GTCGGCGTCGCCGAAGCAGTCATCAGCCAGGATATTGCCCAGTGGCACGAGTATGAAATCCGGTGGGGACTGCATGAAAG TGAACTTCTGGTTGACGGTATAACGGTATTACGGGCACCCTCACCCCGTGGCCCGCTCAGCATTGTGATCTGGATTGATA ATCAATACGCGATTGTGCGCCCAACCGGGCAACTGGGCTGGGGCGTGCGTGCCTGCAACGAAGCCCAGTGGATCGAAGTA GCCCTGATCTCACCCTTCCAATTCCCAACTCCGTAG
Upstream 100 bases:
>100_bases AGAGTGGAAGACATCCAACAAGATACCTCTGTGTTCTCCGTGTCTCTGTGGTGCATTCAAAAGAGGTGCATTCAACACCC AGGCGGAGTAAGAGGCAATC
Downstream 100 bases:
>100_bases CTCTTCCAACCAGCGATGACTGGTCAGATCCATGTGTACCGGCGTCAGGCTGGCATATCCGTCACTAATAGCAGCAATAT CAGTGCCTTCCTCGTAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MVSPWRLRPRCSGGAGVIQTASGLRLLRPPGPANRYRNAQIDDFGQWPGNPRALQPPFTLRLRARTSHPADRLVGTAGFG LWSYPWAWPLRMPQAVWFFFGAPPHDMPLAIGIPGHGWKAAVVDTGRPAARKWIPLAPVIVPLLNIPPLYRRIWPCIQRD VGVAEAVISQDIAQWHEYEIRWGLHESELLVDGITVLRAPSPRGPLSIVIWIDNQYAIVRPTGQLGWGVRACNEAQWIEV ALISPFQFPTP
Sequences:
>Translated_251_residues MVSPWRLRPRCSGGAGVIQTASGLRLLRPPGPANRYRNAQIDDFGQWPGNPRALQPPFTLRLRARTSHPADRLVGTAGFG LWSYPWAWPLRMPQAVWFFFGAPPHDMPLAIGIPGHGWKAAVVDTGRPAARKWIPLAPVIVPLLNIPPLYRRIWPCIQRD VGVAEAVISQDIAQWHEYEIRWGLHESELLVDGITVLRAPSPRGPLSIVIWIDNQYAIVRPTGQLGWGVRACNEAQWIEV ALISPFQFPTP >Mature_251_residues MVSPWRLRPRCSGGAGVIQTASGLRLLRPPGPANRYRNAQIDDFGQWPGNPRALQPPFTLRLRARTSHPADRLVGTAGFG LWSYPWAWPLRMPQAVWFFFGAPPHDMPLAIGIPGHGWKAAVVDTGRPAARKWIPLAPVIVPLLNIPPLYRRIWPCIQRD VGVAEAVISQDIAQWHEYEIRWGLHESELLVDGITVLRAPSPRGPLSIVIWIDNQYAIVRPTGQLGWGVRACNEAQWIEV ALISPFQFPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28065; Mature: 28065
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSPWRLRPRCSGGAGVIQTASGLRLLRPPGPANRYRNAQIDDFGQWPGNPRALQPPFTL CCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEE RLRARTSHPADRLVGTAGFGLWSYPWAWPLRMPQAVWFFFGAPPHDMPLAIGIPGHGWKA EEEECCCCCHHHHEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCEE AVVDTGRPAARKWIPLAPVIVPLLNIPPLYRRIWPCIQRDVGVAEAVISQDIAQWHEYEI EEEECCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEE RWGLHESELLVDGITVLRAPSPRGPLSIVIWIDNQYAIVRPTGQLGWGVRACNEAQWIEV EECCCCCHHEECCEEEEECCCCCCCEEEEEEECCCEEEEECCCCCCCCEECCCCCCEEEE ALISPFQFPTP EEECCCCCCCC >Mature Secondary Structure MVSPWRLRPRCSGGAGVIQTASGLRLLRPPGPANRYRNAQIDDFGQWPGNPRALQPPFTL CCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEE RLRARTSHPADRLVGTAGFGLWSYPWAWPLRMPQAVWFFFGAPPHDMPLAIGIPGHGWKA EEEECCCCCHHHHEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCEE AVVDTGRPAARKWIPLAPVIVPLLNIPPLYRRIWPCIQRDVGVAEAVISQDIAQWHEYEI EEEECCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEE RWGLHESELLVDGITVLRAPSPRGPLSIVIWIDNQYAIVRPTGQLGWGVRACNEAQWIEV EECCCCCHHEECCEEEEECCCCCCCEEEEEEECCCEEEEECCCCCCCCEECCCCCCEEEE ALISPFQFPTP EEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA