| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is mhqR [H]
Identifier: 222526132
GI number: 222526132
Start: 3573936
End: 3574400
Strand: Reverse
Name: mhqR [H]
Synonym: Chy400_2889
Alternate gene names: 222526132
Gene position: 3574400-3573936 (Counterclockwise)
Preceding gene: 222526133
Following gene: 222526131
Centisome position: 67.84
GC content: 54.84
Gene sequence:
>465_bases ATGCCTGAAATCAGCACCTGCGATTCACCACAAATTGAAGCCTACCGCCTCTTCCTGAAACTGCACCGTCGGTTCCAGGA GCTTAACCGTGAAGAGTTTCGGCCCTACGATCTTTCGACTCCGCAGTACGCGATCCTCTTTTACGCGACTGAAGAGGGAG TTCCGCTCAGTTACATCTGTAACGAGATGCTGGCCGACAACTCTAACCTGACCCGGCTGGTTGATCGCCTGGAACGGCGG GGGCTGGTACGTCGAGCGACCGATCCGCGAGATCGCCGGGTAACCCTGGTGCAACTGACTCCGGCCGGTAAGGCGCTGAT TGACGAATTGCGACCGCGCCATCGCCGGTTGGTTGAACAGCGCCTGAGTTATCTTTCGGAAGAAGAGCTGGCTGCCTTTC AGCAAGCAATGCAACATTTGTATGAAGCGCTACTAACGCATCAAGATCACGAAGATACTGAATAG
Upstream 100 bases:
>100_bases AACGGTGCGCCTGAAACCCGGTTCGTGGGGCAGGCGCAATTTTATTCTTGCCAAATCTATGTTTTCTGGTACAATAGTTG ATAAGTCCAGGATGTAAACT
Downstream 100 bases:
>100_bases CTATGCGATCTACCCAGACCCTGTCCAGCCGCCCGGCAATGTTTCGGGCACTCCGTCATCGCAATTATCGCCTCTTCTTC TTCGGACAACTGATTTCGTT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MPEISTCDSPQIEAYRLFLKLHRRFQELNREEFRPYDLSTPQYAILFYATEEGVPLSYICNEMLADNSNLTRLVDRLERR GLVRRATDPRDRRVTLVQLTPAGKALIDELRPRHRRLVEQRLSYLSEEELAAFQQAMQHLYEALLTHQDHEDTE
Sequences:
>Translated_154_residues MPEISTCDSPQIEAYRLFLKLHRRFQELNREEFRPYDLSTPQYAILFYATEEGVPLSYICNEMLADNSNLTRLVDRLERR GLVRRATDPRDRRVTLVQLTPAGKALIDELRPRHRRLVEQRLSYLSEEELAAFQQAMQHLYEALLTHQDHEDTE >Mature_153_residues PEISTCDSPQIEAYRLFLKLHRRFQELNREEFRPYDLSTPQYAILFYATEEGVPLSYICNEMLADNSNLTRLVDRLERRG LVRRATDPRDRRVTLVQLTPAGKALIDELRPRHRRLVEQRLSYLSEEELAAFQQAMQHLYEALLTHQDHEDTE
Specific function: Negatively regulates mhqA, mhqED, mhqNOP, and azoR2 which may contribute to the degradation of aromatic compounds [H]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH marR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000835 - InterPro: IPR023187 - InterPro: IPR011991 [H]
Pfam domain/function: PF01047 MarR [H]
EC number: NA
Molecular weight: Translated: 18259; Mature: 18128
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEISTCDSPQIEAYRLFLKLHRRFQELNREEFRPYDLSTPQYAILFYATEEGVPLSYIC CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHH NEMLADNSNLTRLVDRLERRGLVRRATDPRDRRVTLVQLTPAGKALIDELRPRHRRLVEQ HHHHHCCCCHHHHHHHHHHCCHHHCCCCCCCCEEEEEEECCCCHHHHHHHCHHHHHHHHH RLSYLSEEELAAFQQAMQHLYEALLTHQDHEDTE HHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PEISTCDSPQIEAYRLFLKLHRRFQELNREEFRPYDLSTPQYAILFYATEEGVPLSYIC CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHH NEMLADNSNLTRLVDRLERRGLVRRATDPRDRRVTLVQLTPAGKALIDELRPRHRRLVEQ HHHHHCCCCHHHHHHHHHHCCHHHCCCCCCCCEEEEEEECCCCHHHHHHHCHHHHHHHHH RLSYLSEEELAAFQQAMQHLYEALLTHQDHEDTE HHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]