| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is stp [H]
Identifier: 222526112
GI number: 222526112
Start: 3551811
End: 3553361
Strand: Reverse
Name: stp [H]
Synonym: Chy400_2869
Alternate gene names: 222526112
Gene position: 3553361-3551811 (Counterclockwise)
Preceding gene: 222526113
Following gene: 222526111
Centisome position: 67.44
GC content: 55.64
Gene sequence:
>1551_bases ATGGAAGCGAACCTGCCTCTCTTTGCCAATCGGTTTGCCCCAACCTATCCGTTGCCCGACCCGTGGCCCGTTGGCCCACT GGAAGTGCGTGATCTGGCACCGTGGCAGCGGTGCTGGGCCTGCGGCTCGGTCGCGAATGAAGCCAATGAGTCGTATTGCA TCGATTGTGGTGCTGCCCTCGAAGTGCGTACATATCCGGCTTTTTTATCGGTACGCACAATGCCACAAGGGCCAGCACTC ATCTCGCGCCTGGCTGACCCCCTGGCACGAGCGATGTTACCTGATATTGTCGATCAATATGAATTTGATGAGTGGCAATT GACGGTCCTGCTCGATCAGGAACTGCAACCACTGAACAGTCCTCTTGATGAGACAACAGCGCTTACGATAGGCGCTGCGC TGGCCCGCTTGCTGGTTAGTCTCCATAGTGCTGGTATAAGCCTGGGAACATTCACCATCGACGATCTCGGTCTTATTGGA CCGACGCAGGTTTGCCTCCGCCACGCCAATCATTTGCGCCTGGTCAGTGATGATGAACGGGCAACAGCATTTCAGACCGA TTTGCGCGTACTGACCGATGTGTTGGAACGATTGACTGCCATCCCAAGAACCACCCAGCGGCTGGACGAAGCTACTATCA TTGATGCCGAACAGGCAACTGACAGCCTGGGGACTATCCTGCGCCAGATTCGTACCGGTGAACTGACTGATGCAACTGCG GTTGCCAGGCGACTGGAAGCGCTGCGTGATGAACGAACACATCCGGTACCGCTCTTGCAGGTAGCCGGCGCATACAGTGA TGTTGGGCGGGTGCGCGATCACAATGAAGATAGCCTGTTCAAACTTACCCTCTGCCTGGAAAACAACGGTCAACGACAGA GCTGGGGATTGTACATCGTTGCTGATGGTATGGGTGGGCACGCCGCAGGTGAAGTAGCCAGCGGGCTGGCAGTACGGCAT GCGGCCCAGACAATTATTGACTCGTATCTGCAACAAATGCTGGCCGGCCCTCGTCTGTATCACGAAGCCGACATGCAATC ACTGGTACGTCAGGCAGTGCTGGCAGCGAATGAGGCGATTTACAACGAAGGCCGTGCGCAGGCAAACGATATGGGTTCAA CCTTAACCATGGCGCTGGTGGTCGGTGATCGGGCAGTGGTAGCTAACGTCGGCGATAGTCGCACCTATCTCTTTCGCGAC GGTAAGCTGCAACGGATCAGTCAAGATCACTCGCTGGTCATGCGGCTGGTCGAACTTGGACATCTCAGCGAAGACGAGAT CTATTCGCATCCACAGCGAAATGCCGTCTTGCGATCACTCGGTGATCGCGCTGAGCCGGAGATCGATCTGTTTCAGGTTC ACCTGCGTCCCGGCGATGCGCTCTTGCTTTGTTCAGATGGTCAGTGGGAAATGACACGTGATCCGGTCATGGAACGTATC ATTACTGAGGAAGCCGATCCACAAGAAGCCTGCAAAGCGCTGGTAGCAGCGGCAAACCAGGCAGGTGGTGAAGACAACAT CGCGGTTATCCTGGTGAGACTAAGCCTATGA
Upstream 100 bases:
>100_bases AGGGCGAGAACCCTTGCCGGTTACCGACGCTTGCCTGAGCACAATGCTGACCCAGGCAATTGATCCACTCACATCACCGC TCAGCGGTGAGGAGGAGATG
Downstream 100 bases:
>100_bases GATGTCCACAATGTGGCGCTAGTGTACACGATCAGATTATCTTCTGCCCGGAATGTGGAGCACGGATCCGCAGAGAGGAA GTACCGGCCACAACCCCGCC
Product: protein serine/threonine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MEANLPLFANRFAPTYPLPDPWPVGPLEVRDLAPWQRCWACGSVANEANESYCIDCGAALEVRTYPAFLSVRTMPQGPAL ISRLADPLARAMLPDIVDQYEFDEWQLTVLLDQELQPLNSPLDETTALTIGAALARLLVSLHSAGISLGTFTIDDLGLIG PTQVCLRHANHLRLVSDDERATAFQTDLRVLTDVLERLTAIPRTTQRLDEATIIDAEQATDSLGTILRQIRTGELTDATA VARRLEALRDERTHPVPLLQVAGAYSDVGRVRDHNEDSLFKLTLCLENNGQRQSWGLYIVADGMGGHAAGEVASGLAVRH AAQTIIDSYLQQMLAGPRLYHEADMQSLVRQAVLAANEAIYNEGRAQANDMGSTLTMALVVGDRAVVANVGDSRTYLFRD GKLQRISQDHSLVMRLVELGHLSEDEIYSHPQRNAVLRSLGDRAEPEIDLFQVHLRPGDALLLCSDGQWEMTRDPVMERI ITEEADPQEACKALVAAANQAGGEDNIAVILVRLSL
Sequences:
>Translated_516_residues MEANLPLFANRFAPTYPLPDPWPVGPLEVRDLAPWQRCWACGSVANEANESYCIDCGAALEVRTYPAFLSVRTMPQGPAL ISRLADPLARAMLPDIVDQYEFDEWQLTVLLDQELQPLNSPLDETTALTIGAALARLLVSLHSAGISLGTFTIDDLGLIG PTQVCLRHANHLRLVSDDERATAFQTDLRVLTDVLERLTAIPRTTQRLDEATIIDAEQATDSLGTILRQIRTGELTDATA VARRLEALRDERTHPVPLLQVAGAYSDVGRVRDHNEDSLFKLTLCLENNGQRQSWGLYIVADGMGGHAAGEVASGLAVRH AAQTIIDSYLQQMLAGPRLYHEADMQSLVRQAVLAANEAIYNEGRAQANDMGSTLTMALVVGDRAVVANVGDSRTYLFRD GKLQRISQDHSLVMRLVELGHLSEDEIYSHPQRNAVLRSLGDRAEPEIDLFQVHLRPGDALLLCSDGQWEMTRDPVMERI ITEEADPQEACKALVAAANQAGGEDNIAVILVRLSL >Mature_516_residues MEANLPLFANRFAPTYPLPDPWPVGPLEVRDLAPWQRCWACGSVANEANESYCIDCGAALEVRTYPAFLSVRTMPQGPAL ISRLADPLARAMLPDIVDQYEFDEWQLTVLLDQELQPLNSPLDETTALTIGAALARLLVSLHSAGISLGTFTIDDLGLIG PTQVCLRHANHLRLVSDDERATAFQTDLRVLTDVLERLTAIPRTTQRLDEATIIDAEQATDSLGTILRQIRTGELTDATA VARRLEALRDERTHPVPLLQVAGAYSDVGRVRDHNEDSLFKLTLCLENNGQRQSWGLYIVADGMGGHAAGEVASGLAVRH AAQTIIDSYLQQMLAGPRLYHEADMQSLVRQAVLAANEAIYNEGRAQANDMGSTLTMALVVGDRAVVANVGDSRTYLFRD GKLQRISQDHSLVMRLVELGHLSEDEIYSHPQRNAVLRSLGDRAEPEIDLFQVHLRPGDALLLCSDGQWEMTRDPVMERI ITEEADPQEACKALVAAANQAGGEDNIAVILVRLSL
Specific function: Protein phosphatase that dephosphorylates EF-Tu [H]
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasm. Membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320198, Length=271, Percent_Identity=30.6273062730627, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015655 - InterPro: IPR001932 - InterPro: IPR014045 [H]
Pfam domain/function: PF00481 PP2C [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 56629; Mature: 56629
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEANLPLFANRFAPTYPLPDPWPVGPLEVRDLAPWQRCWACGSVANEANESYCIDCGAAL CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCEE EVRTYPAFLSVRTMPQGPALISRLADPLARAMLPDIVDQYEFDEWQLTVLLDQELQPLNS EEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHCCC PLDETTALTIGAALARLLVSLHSAGISLGTFTIDDLGLIGPTQVCLRHANHLRLVSDDER CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHCCCCEEEECCCCH ATAFQTDLRVLTDVLERLTAIPRTTQRLDEATIIDAEQATDSLGTILRQIRTGELTDATA HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHEEEHHHHHHHHHHHHHHHHCCCCCHHHH VARRLEALRDERTHPVPLLQVAGAYSDVGRVRDHNEDSLFKLTLCLENNGQRQSWGLYIV HHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEEEE ADGMGGHAAGEVASGLAVRHAAQTIIDSYLQQMLAGPRLYHEADMQSLVRQAVLAANEAI ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH YNEGRAQANDMGSTLTMALVVGDRAVVANVGDSRTYLFRDGKLQRISQDHSLVMRLVELG HHCCCCCHHHCCCCEEEEEEECCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHC HLSEDEIYSHPQRNAVLRSLGDRAEPEIDLFQVHLRPGDALLLCSDGQWEMTRDPVMERI CCCHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHH ITEEADPQEACKALVAAANQAGGEDNIAVILVRLSL HHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECC >Mature Secondary Structure MEANLPLFANRFAPTYPLPDPWPVGPLEVRDLAPWQRCWACGSVANEANESYCIDCGAAL CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCEE EVRTYPAFLSVRTMPQGPALISRLADPLARAMLPDIVDQYEFDEWQLTVLLDQELQPLNS EEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHCCC PLDETTALTIGAALARLLVSLHSAGISLGTFTIDDLGLIGPTQVCLRHANHLRLVSDDER CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHCCCCEEEECCCCH ATAFQTDLRVLTDVLERLTAIPRTTQRLDEATIIDAEQATDSLGTILRQIRTGELTDATA HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHEEEHHHHHHHHHHHHHHHHCCCCCHHHH VARRLEALRDERTHPVPLLQVAGAYSDVGRVRDHNEDSLFKLTLCLENNGQRQSWGLYIV HHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEEEE ADGMGGHAAGEVASGLAVRHAAQTIIDSYLQQMLAGPRLYHEADMQSLVRQAVLAANEAI ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH YNEGRAQANDMGSTLTMALVVGDRAVVANVGDSRTYLFRDGKLQRISQDHSLVMRLVELG HHCCCCCHHHCCCCEEEEEEECCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHC HLSEDEIYSHPQRNAVLRSLGDRAEPEIDLFQVHLRPGDALLLCSDGQWEMTRDPVMERI CCCHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHH ITEEADPQEACKALVAAANQAGGEDNIAVILVRLSL HHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]