| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is cobO [H]
Identifier: 222526032
GI number: 222526032
Start: 3435446
End: 3436054
Strand: Reverse
Name: cobO [H]
Synonym: Chy400_2789
Alternate gene names: 222526032
Gene position: 3436054-3435446 (Counterclockwise)
Preceding gene: 222526033
Following gene: 222526031
Centisome position: 65.21
GC content: 55.67
Gene sequence:
>609_bases GTGTCTGATGAGACAACCACACCGGTTGGGCCGGGTTCGTCGCCAGAAGCTGAAGCCCGTCGTAAAGCAGTGCGCGCCAG TCATACACCGAAGGGCCTGGTGATTGTTAATACCGGCAATGGTAAAGGAAAAACTACTGCCGCGCTCGGTGTCTTGTTGC GCGCCTGGGGGCGCAATATGCGTGTCGGTGGTGTGCAGTTTATCAAGCACGAGCAGGCGAAATTCGGTGAATTACGCGCG CTTGAACGGATGGGAATTACCCTGACCCCGCTCGGCGATGGGTTTACCTGGACGAGTCGCGATCTTGATGAGACGCAGGC ACGAGCAGTACACGGTTGGGAGGTCGCTAAAACGCAGATTATCAGTGGCAATTACGATGTCTTTCTCCTCGATGAGTTTA CGTATGTGATGCACTACGGCTGGGTACCTGCCACTGAGGTGGTGGCATGGCTGCGCGCAAATAAACCGCCGATGCTGCAC CTGATCATTACTGGTCGTTACGCACCCGCCGAGCTGATTGAATACGCTGACCTGGTGACTGAAATGCGGGAGGTGAAGCA TCCGTTCCGTGATCAGGGGATTCGGGCGCAACCGGGTATTGAGTATTGA
Upstream 100 bases:
>100_bases AACGAGACCTGCATGCTTTGTACTTGCAGTGTTGTCGTTTCATTACCCCGACCCGAGAAGGTCGGGGTTTTTGTTTATAT GTCAACAGAAGGAGACTGCC
Downstream 100 bases:
>100_bases GCGAGCAGAACGATGGCTGAACAACTCAAGCGCAATATGGTGCAGCGCCTTGATGGGCGGATGGTAAATGCCGGCGCACG ACGCGGGATGTTGATTGTCT
Product: cob(I)alamin adenosyltransferase
Products: NA
Alternate protein names: Cob(I)alamin adenosyltransferase; Corrinoid adenosyltransferase [H]
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSDETTTPVGPGSSPEAEARRKAVRASHTPKGLVIVNTGNGKGKTTAALGVLLRAWGRNMRVGGVQFIKHEQAKFGELRA LERMGITLTPLGDGFTWTSRDLDETQARAVHGWEVAKTQIISGNYDVFLLDEFTYVMHYGWVPATEVVAWLRANKPPMLH LIITGRYAPAELIEYADLVTEMREVKHPFRDQGIRAQPGIEY
Sequences:
>Translated_202_residues MSDETTTPVGPGSSPEAEARRKAVRASHTPKGLVIVNTGNGKGKTTAALGVLLRAWGRNMRVGGVQFIKHEQAKFGELRA LERMGITLTPLGDGFTWTSRDLDETQARAVHGWEVAKTQIISGNYDVFLLDEFTYVMHYGWVPATEVVAWLRANKPPMLH LIITGRYAPAELIEYADLVTEMREVKHPFRDQGIRAQPGIEY >Mature_201_residues SDETTTPVGPGSSPEAEARRKAVRASHTPKGLVIVNTGNGKGKTTAALGVLLRAWGRNMRVGGVQFIKHEQAKFGELRAL ERMGITLTPLGDGFTWTSRDLDETQARAVHGWEVAKTQIISGNYDVFLLDEFTYVMHYGWVPATEVVAWLRANKPPMLHL IITGRYAPAELIEYADLVTEMREVKHPFRDQGIRAQPGIEY
Specific function: Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids [H]
COG id: COG2109
COG function: function code H; ATP:corrinoid adenosyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1787525, Length=202, Percent_Identity=40.0990099009901, Blast_Score=132, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003724 [H]
Pfam domain/function: PF02572 CobA_CobO_BtuR [H]
EC number: =2.5.1.17 [H]
Molecular weight: Translated: 22444; Mature: 22313
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDETTTPVGPGSSPEAEARRKAVRASHTPKGLVIVNTGNGKGKTTAALGVLLRAWGRNM CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCC RVGGVQFIKHEQAKFGELRALERMGITLTPLGDGFTWTSRDLDETQARAVHGWEVAKTQI EECCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHCCHHHHEEEE ISGNYDVFLLDEFTYVMHYGWVPATEVVAWLRANKPPMLHLIITGRYAPAELIEYADLVT ECCCCCEEEECCCEEEHHCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHH EMREVKHPFRDQGIRAQPGIEY HHHHHHCCHHHCCCCCCCCCCC >Mature Secondary Structure SDETTTPVGPGSSPEAEARRKAVRASHTPKGLVIVNTGNGKGKTTAALGVLLRAWGRNM CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCC RVGGVQFIKHEQAKFGELRALERMGITLTPLGDGFTWTSRDLDETQARAVHGWEVAKTQI EECCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHCCHHHHEEEE ISGNYDVFLLDEFTYVMHYGWVPATEVVAWLRANKPPMLHLIITGRYAPAELIEYADLVT ECCCCCEEEECCCEEEHHCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHH EMREVKHPFRDQGIRAQPGIEY HHHHHHCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1655697; 1917862 [H]