Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is cbiN [H]

Identifier: 222526028

GI number: 222526028

Start: 3429030

End: 3429332

Strand: Reverse

Name: cbiN [H]

Synonym: Chy400_2785

Alternate gene names: 222526028

Gene position: 3429332-3429030 (Counterclockwise)

Preceding gene: 222526029

Following gene: 222526027

Centisome position: 65.09

GC content: 59.08

Gene sequence:

>303_bases
ATGATGACGCCCAAACCGTTGTCGTGGCCGGTGATGATCGTGCTCTCGCTGATTGTCATCGGTCTTGCAATCACACCGAT
CTTGCTGATCCGCGATACGGAGTTTGGTGGCGCCGACGCCGCTGCCGAAGTGGCGATTGTCGAAATCAATCCCGACTACG
AACCATGGTTTGCTCCGCTGTTCGAGCCACCGGGTAGCGAAACCGAAAGCCTCTTGTTTGCGTTGCAGGCCGGGTTAGGA
GCAGGCTTCATCGGCTTTTTCTTCGGCTGGCACCATGGCCGCCGGCGACGCCCGGATCGGTGA

Upstream 100 bases:

>100_bases
TGGCGATAAGCGAAGGTATTCTCACGGTGTTGATTATGAATGCGCTGCAAACGACGGCTGCATCCGAACTGCAAGCCCTT
GCAATGAAAGGGGTACGTTC

Downstream 100 bases:

>100_bases
CATGCTACGGGTGATTGATCGCTATGCGTTTAGCAACCGGCTACGCAATGTTGATCCGGCTCAGAAGAGCGGGATCGCTC
TGGCAACGATCCTGCTTTGC

Product: cobalt transport protein CbiN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MMTPKPLSWPVMIVLSLIVIGLAITPILLIRDTEFGGADAAAEVAIVEINPDYEPWFAPLFEPPGSETESLLFALQAGLG
AGFIGFFFGWHHGRRRRPDR

Sequences:

>Translated_100_residues
MMTPKPLSWPVMIVLSLIVIGLAITPILLIRDTEFGGADAAAEVAIVEINPDYEPWFAPLFEPPGSETESLLFALQAGLG
AGFIGFFFGWHHGRRRRPDR
>Mature_100_residues
MMTPKPLSWPVMIVLSLIVIGLAITPILLIRDTEFGGADAAAEVAIVEINPDYEPWFAPLFEPPGSETESLLFALQAGLG
AGFIGFFFGWHHGRRRRPDR

Specific function: May be involved with cobalt transport in association with cobalamin biosynthesis [H]

COG id: COG1930

COG function: function code P; ABC-type cobalt transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiN family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003705 [H]

Pfam domain/function: PF02553 CbiN [H]

EC number: NA

Molecular weight: Translated: 11021; Mature: 11021

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTPKPLSWPVMIVLSLIVIGLAITPILLIRDTEFGGADAAAEVAIVEINPDYEPWFAPL
CCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCC
FEPPGSETESLLFALQAGLGAGFIGFFFGWHHGRRRRPDR
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MMTPKPLSWPVMIVLSLIVIGLAITPILLIRDTEFGGADAAAEVAIVEINPDYEPWFAPL
CCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCC
FEPPGSETESLLFALQAGLGAGFIGFFFGWHHGRRRRPDR
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]