| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525954
Identifier: 222525954
GI number: 222525954
Start: 3344300
End: 3345559
Strand: Reverse
Name: 222525954
Synonym: Chy400_2710
Alternate gene names: NA
Gene position: 3345559-3344300 (Counterclockwise)
Preceding gene: 222525955
Following gene: 222525950
Centisome position: 63.5
GC content: 60.16
Gene sequence:
>1260_bases ATGAACCCTATGCCACTCACCAGTTTTGTGCCAGTCGCGCCTGATAGCGACTTTCCACTGGAAAACTTACCCTACGGGGT CTTTCGGCCCCGCGCCGGTGGCCCGGCCCGTATCGGTGTCGCCATTGGCGAGTATGTGCTCGATCTTGCTGTGATTGATG AGGCCGGGCTACTATCGGCGACCCCGGTTGGCGGTCGTGGTATGTTTGCCCAAGACTCGTTGAATGCGTTTATGGCTGCC GGCCCGACAGCCTGGCAGGCAGTACGGTCAGTGCTGCAACGCCTGCTCACCGCCGATGAACCAACGCTCCGCGACAATCA GGTCCTGCGCGACGCCGCACTGCTGCCGCAACACACCATTGATCTGCTGCTACCGGCCCACATCGGCGATTACACCGACT TCTATTCGTCGCTGTACCACGCCAGCAACGTCGGCAAGATGTTGCGTCCCGACAATCCACCTCTCTTTCCAAACTGGCGC CACCTGCCGGTTGCCTACCATGGACGGGCGAGTACCGTTGTGGTGAGCGGAACACCAATCCATCGTCCATATGGTCAGAC CAAACCGGCTGATAGCCCGGCACCAGTCTATGGCCCGACGCGAGCACTCGATTTTGAGCTAGAGCTGGGTATGTTCATTG GGCCGGGCAACGATCTGGGCAGTCCAATTCCCATCGACCAGGCTGAAGACCATATCTTCGGCTTTGTGCTGGTCAATGAC TGGAGTGCCCGCGATATTCAGGGGTGGGAATACCAGCCGCTCGGCCCATTCCTGGCCAAAAACTTCGCCACCTCAATCAG CCCCTGGGTAGTGCCACTGGCAGCGCTGGAACCGTTCCGTTGTCAGGGCGAACCGCAAGACCCACCACCACTGCCGTATC TGCAACCCGTGCGGCCCGGCCATTTTGCCATCACCCTGGAAGTCTGGCTGAACGACACCCGCATTTGTCAAAGCGACAGC CGTTATCTCTACTGGAGCTGTGCGCAACAAATTGCCCACCACACTGTAAACGGCTGCCGCCTGCGACCGGGTGACCTGCT GGCCTCCGGTACGATCAGCGGGCCGGACAAACACACTCGCGGTTGCCTGCTCGAACTCACCTGGCGTGGCAGCGAACCAT TGACCCTGCGCGATGGCTCGCAACGGCGATGGCTCGAAGATGGTGATACCGTCACAATGCGCGGCTGGGCACAGGGTGAC GGCTATCGCATCGGCTTTGGTGCGGTCAGCGGTACGATCCGCAGAGCCACGCTAGAATAA
Upstream 100 bases:
>100_bases TCCCAGGGGATAGCGGTACGTGTCAACCACGATGGAGCGCTTCAGGGCGCAGCGTGAGCGTAAGATAGATATTGGGCCAA GACGTTTAACCAGATTTGAT
Downstream 100 bases:
>100_bases TTCGTCCAGCATGCGGTAATACGCGATTTTACCGGCATCAACCTGTTCAAGGCCGTAACACGCAAAAAAGTACTGCTCGT ACTGGGGACCTAGATTATAA
Product: fumarylacetoacetase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Hydroxylase; Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetate Hydrolase Domain-Containing; Fumarylacetoacetate; Fumarylacetoacetase Hydrolase; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomerase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MNPMPLTSFVPVAPDSDFPLENLPYGVFRPRAGGPARIGVAIGEYVLDLAVIDEAGLLSATPVGGRGMFAQDSLNAFMAA GPTAWQAVRSVLQRLLTADEPTLRDNQVLRDAALLPQHTIDLLLPAHIGDYTDFYSSLYHASNVGKMLRPDNPPLFPNWR HLPVAYHGRASTVVVSGTPIHRPYGQTKPADSPAPVYGPTRALDFELELGMFIGPGNDLGSPIPIDQAEDHIFGFVLVND WSARDIQGWEYQPLGPFLAKNFATSISPWVVPLAALEPFRCQGEPQDPPPLPYLQPVRPGHFAITLEVWLNDTRICQSDS RYLYWSCAQQIAHHTVNGCRLRPGDLLASGTISGPDKHTRGCLLELTWRGSEPLTLRDGSQRRWLEDGDTVTMRGWAQGD GYRIGFGAVSGTIRRATLE
Sequences:
>Translated_419_residues MNPMPLTSFVPVAPDSDFPLENLPYGVFRPRAGGPARIGVAIGEYVLDLAVIDEAGLLSATPVGGRGMFAQDSLNAFMAA GPTAWQAVRSVLQRLLTADEPTLRDNQVLRDAALLPQHTIDLLLPAHIGDYTDFYSSLYHASNVGKMLRPDNPPLFPNWR HLPVAYHGRASTVVVSGTPIHRPYGQTKPADSPAPVYGPTRALDFELELGMFIGPGNDLGSPIPIDQAEDHIFGFVLVND WSARDIQGWEYQPLGPFLAKNFATSISPWVVPLAALEPFRCQGEPQDPPPLPYLQPVRPGHFAITLEVWLNDTRICQSDS RYLYWSCAQQIAHHTVNGCRLRPGDLLASGTISGPDKHTRGCLLELTWRGSEPLTLRDGSQRRWLEDGDTVTMRGWAQGD GYRIGFGAVSGTIRRATLE >Mature_419_residues MNPMPLTSFVPVAPDSDFPLENLPYGVFRPRAGGPARIGVAIGEYVLDLAVIDEAGLLSATPVGGRGMFAQDSLNAFMAA GPTAWQAVRSVLQRLLTADEPTLRDNQVLRDAALLPQHTIDLLLPAHIGDYTDFYSSLYHASNVGKMLRPDNPPLFPNWR HLPVAYHGRASTVVVSGTPIHRPYGQTKPADSPAPVYGPTRALDFELELGMFIGPGNDLGSPIPIDQAEDHIFGFVLVND WSARDIQGWEYQPLGPFLAKNFATSISPWVVPLAALEPFRCQGEPQDPPPLPYLQPVRPGHFAITLEVWLNDTRICQSDS RYLYWSCAQQIAHHTVNGCRLRPGDLLASGTISGPDKHTRGCLLELTWRGSEPLTLRDGSQRRWLEDGDTVTMRGWAQGD GYRIGFGAVSGTIRRATLE
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=419, Percent_Identity=55.6085918854415, Blast_Score=463, Evalue=1e-130, Organism=Caenorhabditis elegans, GI17568863, Length=417, Percent_Identity=50.8393285371703, Blast_Score=417, Evalue=1e-117, Organism=Drosophila melanogaster, GI24657182, Length=413, Percent_Identity=54.2372881355932, Blast_Score=422, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 45960; Mature: 45960
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPMPLTSFVPVAPDSDFPLENLPYGVFRPRAGGPARIGVAIGEYVLDLAVIDEAGLLSA CCCCCCCCEEECCCCCCCCHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHEEECCCCCEEC TPVGGRGMFAQDSLNAFMAAGPTAWQAVRSVLQRLLTADEPTLRDNQVLRDAALLPQHTI CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHE DLLLPAHIGDYTDFYSSLYHASNVGKMLRPDNPPLFPNWRHLPVAYHGRASTVVVSGTPI EEEECCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCC HRPYGQTKPADSPAPVYGPTRALDFELELGMFIGPGNDLGSPIPIDQAEDHIFGFVLVND CCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEC WSARDIQGWEYQPLGPFLAKNFATSISPWVVPLAALEPFRCQGEPQDPPPLPYLQPVRPG CCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCC HFAITLEVWLNDTRICQSDSRYLYWSCAQQIAHHTVNGCRLRPGDLLASGTISGPDKHTR CEEEEEEEEECCCEEECCCCCEEEHHHHHHHHHHCCCCCEECCCCEEECCCCCCCCCCCC GCLLELTWRGSEPLTLRDGSQRRWLEDGDTVTMRGWAQGDGYRIGFGAVSGTIRRATLE CEEEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEEEECC >Mature Secondary Structure MNPMPLTSFVPVAPDSDFPLENLPYGVFRPRAGGPARIGVAIGEYVLDLAVIDEAGLLSA CCCCCCCCEEECCCCCCCCHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHEEECCCCCEEC TPVGGRGMFAQDSLNAFMAAGPTAWQAVRSVLQRLLTADEPTLRDNQVLRDAALLPQHTI CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHE DLLLPAHIGDYTDFYSSLYHASNVGKMLRPDNPPLFPNWRHLPVAYHGRASTVVVSGTPI EEEECCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCC HRPYGQTKPADSPAPVYGPTRALDFELELGMFIGPGNDLGSPIPIDQAEDHIFGFVLVND CCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEC WSARDIQGWEYQPLGPFLAKNFATSISPWVVPLAALEPFRCQGEPQDPPPLPYLQPVRPG CCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCC HFAITLEVWLNDTRICQSDSRYLYWSCAQQIAHHTVNGCRLRPGDLLASGTISGPDKHTR CEEEEEEEEECCCEEECCCCCEEEHHHHHHHHHHCCCCCEECCCCEEECCCCCCCCCCCC GCLLELTWRGSEPLTLRDGSQRRWLEDGDTVTMRGWAQGDGYRIGFGAVSGTIRRATLE CEEEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA