| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is mutB [H]
Identifier: 222525949
GI number: 222525949
Start: 3336976
End: 3339177
Strand: Reverse
Name: mutB [H]
Synonym: Chy400_2705
Alternate gene names: 222525949
Gene position: 3339177-3336976 (Counterclockwise)
Preceding gene: 222525950
Following gene: 222525948
Centisome position: 63.37
GC content: 60.04
Gene sequence:
>2202_bases GTGAAGAACCCCGACTTTACTACCCTATCGTACCGTGATCCATGGCCTACATCCGATCTTGGCCAGTGGCAGGAACGCGC TGAGCAGGAGGCCGGCCAACCTCTGGCCGATCTGGTCTGGCGGACGATGGAACAGATCGAGGTGAGACCGCTCTACACCG CAGCCGATCTGGCCGGCCTGGAGCACCTTGGCTTTACCGCCGGTATCCCCCCGTACCTGCGCGGGCCGTATCCTACCATG TACGTCACCCAACCCTGGACAATCCGCCAGTACGCCGGTTTCTCGACCGCCGAAGCCAGCAATGCCTTCTACCGGCGAAA TCTGGCTGCCGGTCAAAAGGGCTTATCAGTCGCCTTCGACCTGGCGACCCACCGCGGCTATGACTCCGACCATCCGCGGG TGGTGGGTGACGTTGGTAAAGCGGGTGTCGCCATCGACTCCGTGCTCGACATGAAAATACTCTTCGACGGCATTCCGCTC GATCAGATGTCGGTTTCGATGACGATGAACGGTGCTGTGATCCCGATCATGGCCTTCTTCATCGTCGCCGCTGAAGAGCA AGGGGTGCGCCCGGAACAACTCACCGGCACAATCCAAAACGACATTCTGAAAGAGTACATGGTGCGCAACACCTACATCT ACCCACCCGAACCGTCAATGCGCATCATTGCCGACATCTTCGCCTACACGGCGCAGCACATGCCCAAATTCAACAGCATC AGCATCTCCGGCTACCATATGCAAGAGGCTGGTGCCAGCGCCGACCTTGAACTGGCCTACACGCTGGCCGACGGGCTGGA ATACGTGCGCGCCGGCCTGAAAGCCGGCCTGGCAATCGACAGCTTTGCGCCGCGCCTCTCCTTCTTCTGGGCCATCGGCA TGAACTACTTCATGGAGATTGCCAAGATGCGGGCAGCACGTCTGCTGTGGGCAAAAATCATCAAACAGTTCAACCCGCAA GACCCGCGCTCGCTGGCGCTCCGCACCCATTGTCAGACCTCCGGCTGGAGCCTGACCGAGCAAGACCCCTTCAACAATGT GGCACGCACCTGCATTGAGGCGATGGCGGCGGCGCTCGGTCACACCCAATCGCTGCACACCAATTCACTCGACGAAGCGA TTGCCTTGCCGACCGATTTTTCGGCCCGCATCGCCCGCAACACCCAGTTGTACCTGCAAGAGGAGACCGGCATCTGCAAG ATCGTCGATCCGTGGGGCGGTTCGTACTACCTCGAATGGCTCACCGACGCATTGGCCCGCCGGGCCTGGACGCATATCCA GGAAGTCGAGGCCCTCGGTGGGATGGCCAAAGCGATAGAGGCCGGCTTGCCCAAATTACGGATCGAAGAAGCAGCGGCCC GTCGGCAAGCCCACATCGACTCTGGGCGAGAGACGATTGTCGGGGTGAACAAATATCGTCTCGATTACGAAGAACCCATC GAGATTCTGGAAGTCGATAACACCGCTGTGCGCCAGAAGCAGATCGAACGCCTGCAACGCCTGCGTACCGAACGTGACGA AGTCCGTGTTCAAGCCACGCTCAACGAATTGACCCGCGTGGCGGCCTCTGGTGAAGGCAACCTGCTCGCTGCGGCCATCG AAGCGGCCCGCGCTCGCGCCACACTTGGCGAGATTTCGCTGGCAATGGAAAAGGTGTTTGGGCGGTTCAAGGCTGAAATT CGCTCCATTTCTGGTGTCTACAGCAGCGAATACAGCGATGTAGAACAGATTCACCACGTGCGGGCAATGGCCGACGCCTT CGCCGCTCTGGAAGGGCGCCGACCGCGCATACTGGTCGCCAAAATCGGCCAGGACGGTCACGACCGGGGGGCCAAGGTGG TCGCTACCGCATTTGCCGATCTCGGCTTCGATGTGGATATTGGTTCACTCTTCCAGACACCGGAAGAAGTGGCGCGTCAG GCGGTAGAAAATGACGTACACGTGGTGGGGATCAGCTCACTGGCCGGCGGTCACAAGACTCTCTTGCCCCAACTGGTCGA GGAGTTGCGCAAACTGGGCCGCGAAGACATCATGGTCGTGATCGGTGGTATCATCCCACCACAAGACTACGACTTTCTCC GCGCCCACGGTGCAGCCCTGATCTTCGGCCCCGGAACCATCATTCCGGTCGCTGCCGAGAAGCTGTTGCGCGAGTTGCAA CGGCGTCTCCACGGTGATAGCGTCGCTGCACCGGCATCGTGA
Upstream 100 bases:
>100_bases TTGACACGTACCGCGCTGCCGGGATCGATGAATTCATCCATCTACGCGCCAATTGCTACGACATCCTGGCCCGGCTGCAA CGCTTGAAAGGAGTGGCCGC
Downstream 100 bases:
>100_bases AACGAGGGTGAGAGGGATCATGACCGATAAGCAGCAGCCTTCATCTTCTGGCGAACTACCATTTGCGCTATCGGTACTGG CCGGGATTGCCAGCCGTCAC
Product: methylmalonyl-CoA mutase
Products: NA
Alternate protein names: MCM-alpha [H]
Number of amino acids: Translated: 733; Mature: 733
Protein sequence:
>733_residues MKNPDFTTLSYRDPWPTSDLGQWQERAEQEAGQPLADLVWRTMEQIEVRPLYTAADLAGLEHLGFTAGIPPYLRGPYPTM YVTQPWTIRQYAGFSTAEASNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPRVVGDVGKAGVAIDSVLDMKILFDGIPL DQMSVSMTMNGAVIPIMAFFIVAAEEQGVRPEQLTGTIQNDILKEYMVRNTYIYPPEPSMRIIADIFAYTAQHMPKFNSI SISGYHMQEAGASADLELAYTLADGLEYVRAGLKAGLAIDSFAPRLSFFWAIGMNYFMEIAKMRAARLLWAKIIKQFNPQ DPRSLALRTHCQTSGWSLTEQDPFNNVARTCIEAMAAALGHTQSLHTNSLDEAIALPTDFSARIARNTQLYLQEETGICK IVDPWGGSYYLEWLTDALARRAWTHIQEVEALGGMAKAIEAGLPKLRIEEAAARRQAHIDSGRETIVGVNKYRLDYEEPI EILEVDNTAVRQKQIERLQRLRTERDEVRVQATLNELTRVAASGEGNLLAAAIEAARARATLGEISLAMEKVFGRFKAEI RSISGVYSSEYSDVEQIHHVRAMADAFAALEGRRPRILVAKIGQDGHDRGAKVVATAFADLGFDVDIGSLFQTPEEVARQ AVENDVHVVGISSLAGGHKTLLPQLVEELRKLGREDIMVVIGGIIPPQDYDFLRAHGAALIFGPGTIIPVAAEKLLRELQ RRLHGDSVAAPAS
Sequences:
>Translated_733_residues MKNPDFTTLSYRDPWPTSDLGQWQERAEQEAGQPLADLVWRTMEQIEVRPLYTAADLAGLEHLGFTAGIPPYLRGPYPTM YVTQPWTIRQYAGFSTAEASNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPRVVGDVGKAGVAIDSVLDMKILFDGIPL DQMSVSMTMNGAVIPIMAFFIVAAEEQGVRPEQLTGTIQNDILKEYMVRNTYIYPPEPSMRIIADIFAYTAQHMPKFNSI SISGYHMQEAGASADLELAYTLADGLEYVRAGLKAGLAIDSFAPRLSFFWAIGMNYFMEIAKMRAARLLWAKIIKQFNPQ DPRSLALRTHCQTSGWSLTEQDPFNNVARTCIEAMAAALGHTQSLHTNSLDEAIALPTDFSARIARNTQLYLQEETGICK IVDPWGGSYYLEWLTDALARRAWTHIQEVEALGGMAKAIEAGLPKLRIEEAAARRQAHIDSGRETIVGVNKYRLDYEEPI EILEVDNTAVRQKQIERLQRLRTERDEVRVQATLNELTRVAASGEGNLLAAAIEAARARATLGEISLAMEKVFGRFKAEI RSISGVYSSEYSDVEQIHHVRAMADAFAALEGRRPRILVAKIGQDGHDRGAKVVATAFADLGFDVDIGSLFQTPEEVARQ AVENDVHVVGISSLAGGHKTLLPQLVEELRKLGREDIMVVIGGIIPPQDYDFLRAHGAALIFGPGTIIPVAAEKLLRELQ RRLHGDSVAAPAS >Mature_733_residues MKNPDFTTLSYRDPWPTSDLGQWQERAEQEAGQPLADLVWRTMEQIEVRPLYTAADLAGLEHLGFTAGIPPYLRGPYPTM YVTQPWTIRQYAGFSTAEASNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPRVVGDVGKAGVAIDSVLDMKILFDGIPL DQMSVSMTMNGAVIPIMAFFIVAAEEQGVRPEQLTGTIQNDILKEYMVRNTYIYPPEPSMRIIADIFAYTAQHMPKFNSI SISGYHMQEAGASADLELAYTLADGLEYVRAGLKAGLAIDSFAPRLSFFWAIGMNYFMEIAKMRAARLLWAKIIKQFNPQ DPRSLALRTHCQTSGWSLTEQDPFNNVARTCIEAMAAALGHTQSLHTNSLDEAIALPTDFSARIARNTQLYLQEETGICK IVDPWGGSYYLEWLTDALARRAWTHIQEVEALGGMAKAIEAGLPKLRIEEAAARRQAHIDSGRETIVGVNKYRLDYEEPI EILEVDNTAVRQKQIERLQRLRTERDEVRVQATLNELTRVAASGEGNLLAAAIEAARARATLGEISLAMEKVFGRFKAEI RSISGVYSSEYSDVEQIHHVRAMADAFAALEGRRPRILVAKIGQDGHDRGAKVVATAFADLGFDVDIGSLFQTPEEVARQ AVENDVHVVGISSLAGGHKTLLPQLVEELRKLGREDIMVVIGGIIPPQDYDFLRAHGAALIFGPGTIIPVAAEKLLRELQ RRLHGDSVAAPAS
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates [H]
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=705, Percent_Identity=65.2482269503546, Blast_Score=956, Evalue=0.0, Organism=Escherichia coli, GI1789284, Length=696, Percent_Identity=64.6551724137931, Blast_Score=914, Evalue=0.0, Organism=Caenorhabditis elegans, GI25144500, Length=705, Percent_Identity=62.6950354609929, Blast_Score=924, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006159 - InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR006098 [H]
Pfam domain/function: PF02310 B12-binding; PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 80996; Mature: 80996
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: PS00544 METMALONYL_COA_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNPDFTTLSYRDPWPTSDLGQWQERAEQEAGQPLADLVWRTMEQIEVRPLYTAADLAGL CCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHH EHLGFTAGIPPYLRGPYPTMYVTQPWTIRQYAGFSTAEASNAFYRRNLAAGQKGLSVAFD HHCCCCCCCCCCCCCCCCEEEEECCEEEHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEE LATHRGYDSDHPRVVGDVGKAGVAIDSVLDMKILFDGIPLDQMSVSMTMNGAVIPIMAFF HHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHH IVAAEEQGVRPEQLTGTIQNDILKEYMVRNTYIYPPEPSMRIIADIFAYTAQHMPKFNSI HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCCCCE SISGYHMQEAGASADLELAYTLADGLEYVRAGLKAGLAIDSFAPRLSFFWAIGMNYFMEI EEECEEHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH AKMRAARLLWAKIIKQFNPQDPRSLALRTHCQTSGWSLTEQDPFNNVARTCIEAMAAALG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC HTQSLHTNSLDEAIALPTDFSARIARNTQLYLQEETGICKIVDPWGGSYYLEWLTDALAR CCCCCCCCCCHHHHCCCCCCHHHHHCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHH RAWTHIQEVEALGGMAKAIEAGLPKLRIEEAAARRQAHIDSGRETIVGVNKYRLDYEEPI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEECHHEECCCCCCC EILEVDNTAVRQKQIERLQRLRTERDEVRVQATLNELTRVAASGEGNLLAAAIEAARARA EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH TLGEISLAMEKVFGRFKAEIRSISGVYSSEYSDVEQIHHVRAMADAFAALEGRRPRILVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE KIGQDGHDRGAKVVATAFADLGFDVDIGSLFQTPEEVARQAVENDVHVVGISSLAGGHKT ECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCCEEEEEEHHHCCCHHH LLPQLVEELRKLGREDIMVVIGGIIPPQDYDFLRAHGAALIFGPGTIIPVAAEKLLRELQ HHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHHHH RRLHGDSVAAPAS HHHCCCCCCCCCC >Mature Secondary Structure MKNPDFTTLSYRDPWPTSDLGQWQERAEQEAGQPLADLVWRTMEQIEVRPLYTAADLAGL CCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHH EHLGFTAGIPPYLRGPYPTMYVTQPWTIRQYAGFSTAEASNAFYRRNLAAGQKGLSVAFD HHCCCCCCCCCCCCCCCCEEEEECCEEEHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEE LATHRGYDSDHPRVVGDVGKAGVAIDSVLDMKILFDGIPLDQMSVSMTMNGAVIPIMAFF HHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHH IVAAEEQGVRPEQLTGTIQNDILKEYMVRNTYIYPPEPSMRIIADIFAYTAQHMPKFNSI HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCCCCE SISGYHMQEAGASADLELAYTLADGLEYVRAGLKAGLAIDSFAPRLSFFWAIGMNYFMEI EEECEEHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH AKMRAARLLWAKIIKQFNPQDPRSLALRTHCQTSGWSLTEQDPFNNVARTCIEAMAAALG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC HTQSLHTNSLDEAIALPTDFSARIARNTQLYLQEETGICKIVDPWGGSYYLEWLTDALAR CCCCCCCCCCHHHHCCCCCCHHHHHCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHH RAWTHIQEVEALGGMAKAIEAGLPKLRIEEAAARRQAHIDSGRETIVGVNKYRLDYEEPI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEECHHEECCCCCCC EILEVDNTAVRQKQIERLQRLRTERDEVRVQATLNELTRVAASGEGNLLAAAIEAARARA EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH TLGEISLAMEKVFGRFKAEIRSISGVYSSEYSDVEQIHHVRAMADAFAALEGRRPRILVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE KIGQDGHDRGAKVVATAFADLGFDVDIGSLFQTPEEVARQAVENDVHVVGISSLAGGHKT ECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCCEEEEEEHHHCCCHHH LLPQLVEELRKLGREDIMVVIGGIIPPQDYDFLRAHGAALIFGPGTIIPVAAEKLLRELQ HHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHCCCEEEECCCCCHHHHHHHHHHHHH RRLHGDSVAAPAS HHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8566763; 12949112 [H]