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The map label for this gene is crtI [H]

Identifier: 222525858

GI number: 222525858

Start: 3246937

End: 3248421

Strand: Reverse

Name: crtI [H]

Synonym: Chy400_2611

Alternate gene names: 222525858

Gene position: 3248421-3246937 (Counterclockwise)

Preceding gene: 222525869

Following gene: 222525855

Centisome position: 61.65

GC content: 55.76

Gene sequence:

>1485_bases
ATGGGGCAGAAAAGGATTGTCGTGATTGGTAGTGGATTTGGTGGCCTGAGTGCAGCAATTCGCCTGGCAGCACAGGGGCA
CCTGGTCACGATTCTCGAACAGCGTGACCGTCCCGGTGGTCGGGCCTATGTCTATCAAACTAAAGGTTATACGTTTGATA
GTGGGCCAACGGTGATCACCGCCCCCTTCATGTTCGATGAGCTATGGCAGTTGGCCGGCAAACGACGGGAAGATTACTTC
ATGCTGGAGCCTTGCCGTCCCTACTATCGCCTTTTCAATCACGAGGGCCGCTATCTGGAGTATGGGGAAGATGAGGAGGC
GTTGCTCGAACAAATCCGTCAATGGAATCCGGCCGATGTTGAGGGTTACCGGCGCTTCATCGCCAGCACTCGCCCGATTT
TCGAGAAAGGTTTCAGTCTCATTGATAAACCGTTTCTCCACATTGGCGACATGCTGCGCGTGGCCCCCGATCTGATTCGC
CTCAAATCGTACCAGAGTGTCTATCAATTCGTCTCGCAGTTTTTTCAGGATGATTTTCTCCGCCGTTGCTTTTCGTTTCA
TCCGTTGTTTATTGGCGGTAATCCCTTCGATGCGACCTCTATCTACGCGATGGTGCATTATCTCGAACGGCGTTGGGGAG
TGTACCACGCTCGCGGCGGAACCGGCTCGATTGTGAAGGCGATGGTTCAACTCTTTACCGAGCTTGGTGGTCAGCTTGAG
CTAAATGCCAAAGCCGTTGAGATTGTGATCAATGGGCGGCGTGCCCAGGCGGTGCGCACGCAAGATGGCCGGTTATTCCC
TGCCGACGTAGTGGTCTCGAATGCCGATGTGCCACAAACGTACATGAACCTCATCCCACCGCGTTACCGCAAAGTGCAAA
CTGACCGGCGTCTCCGTCGGTTACGTTACAGTATGTCGCTGGCTGTGATCTACCTGGGCATTAACCGTCGCTACGACGAT
GGCCGGCTGGTGCAGCACAACATCATCTTCAGCGAGCGCTACAAAGGTCTCCTCGACGATATCTTTAACCGCAAGCGACT
GGCCGATGATTTCTCGCTCTATCTGCACCGACCCTCGCACAACGATCCAACAATGGCGCCTCCCGGCCACGAAGCGCTCT
ACGTCCTCACGCCGGTACCCAATCTGGCAGCGCCGATTGACTGGTCTGTCGCCGGGCCACGCCTGCGCGAGGCGATTTTG
ACCTTCCTCGAAGAGCATTACATGCCAGGATTACGCCGGCATATCGTGGTCGAGCACATGGTCGATCCGCGCTATTATCG
CGATGCACTCAACAGCTATCTGGGCGCCGGCTTTTCGATTCAACCCATTTTGACGCAGTCGGCCTGGTTCCGCCCGCACA
ACCGCTCGGAGGATATTGACAACCTCTACCTGGTTGGTGCCGGTACCCATCCCGGTGCCGGCTTACCCGGTGTGATCGCA
TCAGGTGCAATTGTCGCCAATCTCGTAAGCCAGGAACAGGCGTGA

Upstream 100 bases:

>100_bases
ATTCTTTCTACACACAGTCACACCTCTCTTTACAATCGGCATGGCCGGTCTCCGTCTGGCGTTCCGGCGCGCCACAGAGC
TTTCCAGAGGTACTTGCTGT

Downstream 100 bases:

>100_bases
GAGAGCAGGAGGAGAGGGACGTACCGTTACCCCTCCCTCTCCTCCCTGTGCCCTCGGTGCCTCTGTGGTGTTCATTCCAG
GCGCCGGCTTACCCGGCGTG

Product: phytoene desaturase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MGQKRIVVIGSGFGGLSAAIRLAAQGHLVTILEQRDRPGGRAYVYQTKGYTFDSGPTVITAPFMFDELWQLAGKRREDYF
MLEPCRPYYRLFNHEGRYLEYGEDEEALLEQIRQWNPADVEGYRRFIASTRPIFEKGFSLIDKPFLHIGDMLRVAPDLIR
LKSYQSVYQFVSQFFQDDFLRRCFSFHPLFIGGNPFDATSIYAMVHYLERRWGVYHARGGTGSIVKAMVQLFTELGGQLE
LNAKAVEIVINGRRAQAVRTQDGRLFPADVVVSNADVPQTYMNLIPPRYRKVQTDRRLRRLRYSMSLAVIYLGINRRYDD
GRLVQHNIIFSERYKGLLDDIFNRKRLADDFSLYLHRPSHNDPTMAPPGHEALYVLTPVPNLAAPIDWSVAGPRLREAIL
TFLEEHYMPGLRRHIVVEHMVDPRYYRDALNSYLGAGFSIQPILTQSAWFRPHNRSEDIDNLYLVGAGTHPGAGLPGVIA
SGAIVANLVSQEQA

Sequences:

>Translated_494_residues
MGQKRIVVIGSGFGGLSAAIRLAAQGHLVTILEQRDRPGGRAYVYQTKGYTFDSGPTVITAPFMFDELWQLAGKRREDYF
MLEPCRPYYRLFNHEGRYLEYGEDEEALLEQIRQWNPADVEGYRRFIASTRPIFEKGFSLIDKPFLHIGDMLRVAPDLIR
LKSYQSVYQFVSQFFQDDFLRRCFSFHPLFIGGNPFDATSIYAMVHYLERRWGVYHARGGTGSIVKAMVQLFTELGGQLE
LNAKAVEIVINGRRAQAVRTQDGRLFPADVVVSNADVPQTYMNLIPPRYRKVQTDRRLRRLRYSMSLAVIYLGINRRYDD
GRLVQHNIIFSERYKGLLDDIFNRKRLADDFSLYLHRPSHNDPTMAPPGHEALYVLTPVPNLAAPIDWSVAGPRLREAIL
TFLEEHYMPGLRRHIVVEHMVDPRYYRDALNSYLGAGFSIQPILTQSAWFRPHNRSEDIDNLYLVGAGTHPGAGLPGVIA
SGAIVANLVSQEQA
>Mature_493_residues
GQKRIVVIGSGFGGLSAAIRLAAQGHLVTILEQRDRPGGRAYVYQTKGYTFDSGPTVITAPFMFDELWQLAGKRREDYFM
LEPCRPYYRLFNHEGRYLEYGEDEEALLEQIRQWNPADVEGYRRFIASTRPIFEKGFSLIDKPFLHIGDMLRVAPDLIRL
KSYQSVYQFVSQFFQDDFLRRCFSFHPLFIGGNPFDATSIYAMVHYLERRWGVYHARGGTGSIVKAMVQLFTELGGQLEL
NAKAVEIVINGRRAQAVRTQDGRLFPADVVVSNADVPQTYMNLIPPRYRKVQTDRRLRRLRYSMSLAVIYLGINRRYDDG
RLVQHNIIFSERYKGLLDDIFNRKRLADDFSLYLHRPSHNDPTMAPPGHEALYVLTPVPNLAAPIDWSVAGPRLREAILT
FLEEHYMPGLRRHIVVEHMVDPRYYRDALNSYLGAGFSIQPILTQSAWFRPHNRSEDIDNLYLVGAGTHPGAGLPGVIAS
GAIVANLVSQEQA

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 56424; Mature: 56293

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS00982 PHYTOENE_DH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQKRIVVIGSGFGGLSAAIRLAAQGHLVTILEQRDRPGGRAYVYQTKGYTFDSGPTVIT
CCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCEEECCCCCEEE
APFMFDELWQLAGKRREDYFMLEPCRPYYRLFNHEGRYLEYGEDEEALLEQIRQWNPADV
CHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCCH
EGYRRFIASTRPIFEKGFSLIDKPFLHIGDMLRVAPDLIRLKSYQSVYQFVSQFFQDDFL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRCFSFHPLFIGGNPFDATSIYAMVHYLERRWGVYHARGGTGSIVKAMVQLFTELGGQLE
HHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCEEE
LNAKAVEIVINGRRAQAVRTQDGRLFPADVVVSNADVPQTYMNLIPPRYRKVQTDRRLRR
ECCEEEEEEEECCHHEEEECCCCCCCCHHEEEECCCCCHHHHHHCCHHHHHHHHHHHHHH
LRYSMSLAVIYLGINRRYDDGRLVQHNIIFSERYKGLLDDIFNRKRLADDFSLYLHRPSH
HHHHHEEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
NDPTMAPPGHEALYVLTPVPNLAAPIDWSVAGPRLREAILTFLEEHYMPGLRRHIVVEHM
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VDPRYYRDALNSYLGAGFSIQPILTQSAWFRPHNRSEDIDNLYLVGAGTHPGAGLPGVIA
CCCHHHHHHHHHHHCCCCEECHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHH
SGAIVANLVSQEQA
HHHHHHHHHHHCCC
>Mature Secondary Structure 
GQKRIVVIGSGFGGLSAAIRLAAQGHLVTILEQRDRPGGRAYVYQTKGYTFDSGPTVIT
CCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCEEECCCCCEEE
APFMFDELWQLAGKRREDYFMLEPCRPYYRLFNHEGRYLEYGEDEEALLEQIRQWNPADV
CHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCCH
EGYRRFIASTRPIFEKGFSLIDKPFLHIGDMLRVAPDLIRLKSYQSVYQFVSQFFQDDFL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRCFSFHPLFIGGNPFDATSIYAMVHYLERRWGVYHARGGTGSIVKAMVQLFTELGGQLE
HHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCEEE
LNAKAVEIVINGRRAQAVRTQDGRLFPADVVVSNADVPQTYMNLIPPRYRKVQTDRRLRR
ECCEEEEEEEECCHHEEEECCCCCCCCHHEEEECCCCCHHHHHHCCHHHHHHHHHHHHHH
LRYSMSLAVIYLGINRRYDDGRLVQHNIIFSERYKGLLDDIFNRKRLADDFSLYLHRPSH
HHHHHEEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
NDPTMAPPGHEALYVLTPVPNLAAPIDWSVAGPRLREAILTFLEEHYMPGLRRHIVVEHM
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
VDPRYYRDALNSYLGAGFSIQPILTQSAWFRPHNRSEDIDNLYLVGAGTHPGAGLPGVIA
CCCHHHHHHHHHHHCCCCEECHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHH
SGAIVANLVSQEQA
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2263648 [H]