| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525838
Identifier: 222525838
GI number: 222525838
Start: 3226209
End: 3226742
Strand: Direct
Name: 222525838
Synonym: Chy400_2591
Alternate gene names: NA
Gene position: 3226209-3226742 (Clockwise)
Preceding gene: 222525837
Following gene: 222525839
Centisome position: 61.23
GC content: 50.56
Gene sequence:
>534_bases ATGACTGCATTACGATTTAATCTCGCGCAATTACTGCGCGAAGAAATGGGAGCGCGACGAGACATCTCGTTTAGTGAGCC AGCCTTGCCGCTTGACGAGGAGTTGACGCTTCGTAATATTACCGGCCGCCTGCGCCTGACCCGGACAGCGGCTGGAGTGT TCGCTCAGGTAACGGTTCACGGTACTGTGACGCTTACCTGCGTGCGTTCACTCGAACCGTTTGATTATGAACTTGACCTC GATTTCAGCGATCAGTTTTACGCTGTTGTTGATGTGGTGAATGGGCATAAGTTACCGCAACCAGTCGAAGATGATCCTTT CATGCTCGATGAGTTGCACCATATTGATATTGGTGAAGCGATCCGTAGCTACGCGCTGATCAATTTGCCGATGAATCCAA TTGCACCGGCTTACCGTGATCAGCCAGTCAATTACACTGTTGCGTCTGAGGGAATTGAGGACGACGATACACTCGTCGAT GACCGTTTTGCTGCTTTGCGAGAATGGGCCAAGCGGCAACGTAATCAACATTGA
Upstream 100 bases:
>100_bases CGCGCTGGAAGAACGCCAATCGGGCGCTTGACAATCCTCCGCTCTCTCGCCTATAATTCGGCGCTTGTGGCGGAACAACG GTGCGCCACGGGTGGATGCT
Downstream 100 bases:
>100_bases GGAGTAACAATCATGGGAGCAGTACCAAAGCGAAAAGTCTCGCGCCATCGGCGTGGCAACCGCCGCCAGCACCTTGCCCT TACCCCGCCAGTTATGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTALRFNLAQLLREEMGARRDISFSEPALPLDEELTLRNITGRLRLTRTAAGVFAQVTVHGTVTLTCVRSLEPFDYELDL DFSDQFYAVVDVVNGHKLPQPVEDDPFMLDELHHIDIGEAIRSYALINLPMNPIAPAYRDQPVNYTVASEGIEDDDTLVD DRFAALREWAKRQRNQH
Sequences:
>Translated_177_residues MTALRFNLAQLLREEMGARRDISFSEPALPLDEELTLRNITGRLRLTRTAAGVFAQVTVHGTVTLTCVRSLEPFDYELDL DFSDQFYAVVDVVNGHKLPQPVEDDPFMLDELHHIDIGEAIRSYALINLPMNPIAPAYRDQPVNYTVASEGIEDDDTLVD DRFAALREWAKRQRNQH >Mature_176_residues TALRFNLAQLLREEMGARRDISFSEPALPLDEELTLRNITGRLRLTRTAAGVFAQVTVHGTVTLTCVRSLEPFDYELDLD FSDQFYAVVDVVNGHKLPQPVEDDPFMLDELHHIDIGEAIRSYALINLPMNPIAPAYRDQPVNYTVASEGIEDDDTLVDD RFAALREWAKRQRNQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20154; Mature: 20023
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALRFNLAQLLREEMGARRDISFSEPALPLDEELTLRNITGRLRLTRTAAGVFAQVTVH CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEEEECCCEEEEEEEC GTVTLTCVRSLEPFDYELDLDFSDQFYAVVDVVNGHKLPQPVEDDPFMLDELHHIDIGEA CEEEEEEEECCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCHHHH IRSYALINLPMNPIAPAYRDQPVNYTVASEGIEDDDTLVDDRFAALREWAKRQRNQH HHHEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TALRFNLAQLLREEMGARRDISFSEPALPLDEELTLRNITGRLRLTRTAAGVFAQVTVH CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEEEECCCEEEEEEEC GTVTLTCVRSLEPFDYELDLDFSDQFYAVVDVVNGHKLPQPVEDDPFMLDELHHIDIGEA CEEEEEEEECCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCHHHH IRSYALINLPMNPIAPAYRDQPVNYTVASEGIEDDDTLVDDRFAALREWAKRQRNQH HHHEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA