| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222525766
Identifier: 222525766
GI number: 222525766
Start: 3164483
End: 3165586
Strand: Direct
Name: 222525766
Synonym: Chy400_2519
Alternate gene names: NA
Gene position: 3164483-3165586 (Clockwise)
Preceding gene: 222525765
Following gene: 222525767
Centisome position: 60.06
GC content: 52.63
Gene sequence:
>1104_bases ATGTCAGATCCACTCGCGCCGTATTATTTTCCATGGCCATTTGGGCAGCAACGCTTCGATGAATTGATCTCACAACCAGA CATCTTTGCCGGGGCATTCAAAGAATCCATCCTCGCAAATCTCAACTACCGTTTAATGGGTACCGGCCTGGCTCAGTCGG GTAACATCCTGATCCAGTCGGTTGCGCTGGACCAGAACGTGCTGACCGTCACCTTTTCGCCCGAAGGTAACCGGCTGTTG GGTCTTGGACAACTCTCCGTAATGGGGAATGGTTCCCGCCCAATCCTGGTTGATGCCGCGGGGCGGACTGTTGAAATCGC TCGTCTGACGCCGAATGTGGTCCAGCGGTTAGCAGCCATCAGTGGCGTTGTGGTCAGTGTTGCAAACGTGATTTCAGCGG CTGATCTGGCACATCGTATGCAGCAGATGGAGACAAAACTTGATCTGCTGATTGCGTATCGGCGGATAGATCAGGAGGCT AAGCTCGAAGGAGTCTTCTACGCCGCTCGTGAACTGTGTGCCGGGCCAATCTCGCCAGATGAACGTCGGCAATTACGGCA GTTGCGGCAGGAACTCCGTGAGCTACGGATTGTGCTGCGCAAAGAATGGCAACGTGAGCTGGAACAGATTGCGCAACAGC AGGTGACGGGGTTTGATGTATTCTTTGAGCTGCTCGGGCGAAACTGGAATGGTGCGATGAACATCATCGGCAATGCGTTT CAGGGACGTGGTGAACAGAAAGATGCTGCTCTGCCTCAATTGGTCAATCAAGTACAGCAACGGGCGCAGCAAAACGAACG TGAGCTGTATCAACAGCGATGGCGTGCGAAATTTGATCCGACCCTGAGCTATCCGTTCCTCATCGAGTTTATACTGCGGC TCGAGGTGGTGCTGGCAATGGCGAGTCGTGATGAAGTCGCGTACAGCCAATCGCTGCGTGATGAATTAGCCGCAATCGAA CAGGTCGTCAATTATCTGGACGAGCAGAATCAAAACCTCGGTCTTGGCTATCAGTTTATTGCCGATTATCGCAGATTGCT TGGCGATTATCGGCAGTTTGGTCAGGCGTTGGGTAGTAATCTGTTTATCCAACAGTTGCCATAA
Upstream 100 bases:
>100_bases CATCCGGTAATTGGCTGGTAATTCCGCATTCGTATACTATATCGCAGCCAGATCGCGGTACAACGTATGTATCCACCAGC ACAGTCTTTGGAGATCGAAC
Downstream 100 bases:
>100_bases ATAACAGTATGGAAACGCATTGTGTATGGGCTTTCGTCGACTGGTGTCTGACGAGGAACAGTTATTGGTGATGCCGGGTG AGGTCTGTCGTTGTCGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSDPLAPYYFPWPFGQQRFDELISQPDIFAGAFKESILANLNYRLMGTGLAQSGNILIQSVALDQNVLTVTFSPEGNRLL GLGQLSVMGNGSRPILVDAAGRTVEIARLTPNVVQRLAAISGVVVSVANVISAADLAHRMQQMETKLDLLIAYRRIDQEA KLEGVFYAARELCAGPISPDERRQLRQLRQELRELRIVLRKEWQRELEQIAQQQVTGFDVFFELLGRNWNGAMNIIGNAF QGRGEQKDAALPQLVNQVQQRAQQNERELYQQRWRAKFDPTLSYPFLIEFILRLEVVLAMASRDEVAYSQSLRDELAAIE QVVNYLDEQNQNLGLGYQFIADYRRLLGDYRQFGQALGSNLFIQQLP
Sequences:
>Translated_367_residues MSDPLAPYYFPWPFGQQRFDELISQPDIFAGAFKESILANLNYRLMGTGLAQSGNILIQSVALDQNVLTVTFSPEGNRLL GLGQLSVMGNGSRPILVDAAGRTVEIARLTPNVVQRLAAISGVVVSVANVISAADLAHRMQQMETKLDLLIAYRRIDQEA KLEGVFYAARELCAGPISPDERRQLRQLRQELRELRIVLRKEWQRELEQIAQQQVTGFDVFFELLGRNWNGAMNIIGNAF QGRGEQKDAALPQLVNQVQQRAQQNERELYQQRWRAKFDPTLSYPFLIEFILRLEVVLAMASRDEVAYSQSLRDELAAIE QVVNYLDEQNQNLGLGYQFIADYRRLLGDYRQFGQALGSNLFIQQLP >Mature_366_residues SDPLAPYYFPWPFGQQRFDELISQPDIFAGAFKESILANLNYRLMGTGLAQSGNILIQSVALDQNVLTVTFSPEGNRLLG LGQLSVMGNGSRPILVDAAGRTVEIARLTPNVVQRLAAISGVVVSVANVISAADLAHRMQQMETKLDLLIAYRRIDQEAK LEGVFYAARELCAGPISPDERRQLRQLRQELRELRIVLRKEWQRELEQIAQQQVTGFDVFFELLGRNWNGAMNIIGNAFQ GRGEQKDAALPQLVNQVQQRAQQNERELYQQRWRAKFDPTLSYPFLIEFILRLEVVLAMASRDEVAYSQSLRDELAAIEQ VVNYLDEQNQNLGLGYQFIADYRRLLGDYRQFGQALGSNLFIQQLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41650; Mature: 41519
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPLAPYYFPWPFGQQRFDELISQPDIFAGAFKESILANLNYRLMGTGLAQSGNILIQS CCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEE VALDQNVLTVTFSPEGNRLLGLGQLSVMGNGSRPILVDAAGRTVEIARLTPNVVQRLAAI EEECCCEEEEEECCCCCEEEEECEEEEECCCCCCEEEECCCCEEEEECCCHHHHHHHHHH SGVVVSVANVISAADLAHRMQQMETKLDLLIAYRRIDQEAKLEGVFYAARELCAGPISPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCH ERRQLRQLRQELRELRIVLRKEWQRELEQIAQQQVTGFDVFFELLGRNWNGAMNIIGNAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH QGRGEQKDAALPQLVNQVQQRAQQNERELYQQRWRAKFDPTLSYPFLIEFILRLEVVLAM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH ASRDEVAYSQSLRDELAAIEQVVNYLDEQNQNLGLGYQFIADYRRLLGDYRQFGQALGSN HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC LFIQQLP CEEECCC >Mature Secondary Structure SDPLAPYYFPWPFGQQRFDELISQPDIFAGAFKESILANLNYRLMGTGLAQSGNILIQS CCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEE VALDQNVLTVTFSPEGNRLLGLGQLSVMGNGSRPILVDAAGRTVEIARLTPNVVQRLAAI EEECCCEEEEEECCCCCEEEEECEEEEECCCCCCEEEECCCCEEEEECCCHHHHHHHHHH SGVVVSVANVISAADLAHRMQQMETKLDLLIAYRRIDQEAKLEGVFYAARELCAGPISPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCH ERRQLRQLRQELRELRIVLRKEWQRELEQIAQQQVTGFDVFFELLGRNWNGAMNIIGNAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH QGRGEQKDAALPQLVNQVQQRAQQNERELYQQRWRAKFDPTLSYPFLIEFILRLEVVLAM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH ASRDEVAYSQSLRDELAAIEQVVNYLDEQNQNLGLGYQFIADYRRLLGDYRQFGQALGSN HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC LFIQQLP CEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA