Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222525764

Identifier: 222525764

GI number: 222525764

Start: 3161157

End: 3161933

Strand: Reverse

Name: 222525764

Synonym: Chy400_2517

Alternate gene names: NA

Gene position: 3161933-3161157 (Counterclockwise)

Preceding gene: 222525768

Following gene: 222525760

Centisome position: 60.01

GC content: 59.46

Gene sequence:

>777_bases
ATGCACCTGTACCACACAGCAACGATCCACACGTACCGCCAGTTTGAGCAATTGATTTGGTTGAGCGTAAAGGCAGCATC
GCTGGCTCGCCATGCTCAGCCCGGCCAGGTTGCTCTGGTGCGTCACTCCCAACCGGGACTTGACCCGCTGCTGTGGACAA
CACTCTTTCTGGCTGGTGCCGATCCGGCCACCGGCACGGTCGAATTTCTCATCGATCCTCGCGATCCGGCGGTGATCTGG
TTGTCTGATCTATCGCCGGGAACTGCGCTCGATCTTTGCGTGCCGGGTGGGAAACACTTCTCCCTCAAGCCAACAACCCA
GACCCTCTTGCTGGCAGGCACCGGCGCAGCCCTACCGGCTTTGCTCTTCCTGGCCCGCCAGCAGGCCGGCAGACAGAATA
TTGCGCTGTTTATGGCTGGAGACACCGGTTTTCTACCCCCTCCTTTTCTCCTGCCACCGACAGTAGAAATTCAGATCAGC
CAGGCCGGCGAGGCAACATTATTCGATCTGCTTACGTCATCACCACAGAGTCCGCTACGGTGGGCCGATCAGATCGGCCT
GGCATTACCACCCACGATGCTGGCACTGGCGGCAAACGTCATTCGATCAACGCGCCTGCGCTGGCAACCAGGACTGGCCC
AGGTTGTGGTGGCCGGATCACTACCGTGTGGGATAGGGGTCTGTCGGGCCTGCCAGATCGAAACCCGTCATGGCTGGCAG
CGACGTTGTGTAGAGGGACCGGTGTTTGACCTATACGATCTTCGCCTGTCGCTGTGA

Upstream 100 bases:

>100_bases
TTCTAACGATCAGGCCCCTCTTCAGACATTTGTGCATTATCGAGCAGATTGCACTCTACACGCATGGAAGAGATGGCTTC
TGTATCTTCGGAATCACAAT

Downstream 100 bases:

>100_bases
GACAGGCGATACACCATCTGACTAGAGCGGAAGTGTAGACATGTAGACCGGCAAACAGCCTCTCTACGGCAAATCACCTT
CGATACGGCGGAAGCTATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MHLYHTATIHTYRQFEQLIWLSVKAASLARHAQPGQVALVRHSQPGLDPLLWTTLFLAGADPATGTVEFLIDPRDPAVIW
LSDLSPGTALDLCVPGGKHFSLKPTTQTLLLAGTGAALPALLFLARQQAGRQNIALFMAGDTGFLPPPFLLPPTVEIQIS
QAGEATLFDLLTSSPQSPLRWADQIGLALPPTMLALAANVIRSTRLRWQPGLAQVVVAGSLPCGIGVCRACQIETRHGWQ
RRCVEGPVFDLYDLRLSL

Sequences:

>Translated_258_residues
MHLYHTATIHTYRQFEQLIWLSVKAASLARHAQPGQVALVRHSQPGLDPLLWTTLFLAGADPATGTVEFLIDPRDPAVIW
LSDLSPGTALDLCVPGGKHFSLKPTTQTLLLAGTGAALPALLFLARQQAGRQNIALFMAGDTGFLPPPFLLPPTVEIQIS
QAGEATLFDLLTSSPQSPLRWADQIGLALPPTMLALAANVIRSTRLRWQPGLAQVVVAGSLPCGIGVCRACQIETRHGWQ
RRCVEGPVFDLYDLRLSL
>Mature_258_residues
MHLYHTATIHTYRQFEQLIWLSVKAASLARHAQPGQVALVRHSQPGLDPLLWTTLFLAGADPATGTVEFLIDPRDPAVIW
LSDLSPGTALDLCVPGGKHFSLKPTTQTLLLAGTGAALPALLFLARQQAGRQNIALFMAGDTGFLPPPFLLPPTVEIQIS
QAGEATLFDLLTSSPQSPLRWADQIGLALPPTMLALAANVIRSTRLRWQPGLAQVVVAGSLPCGIGVCRACQIETRHGWQ
RRCVEGPVFDLYDLRLSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27918; Mature: 27918

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLYHTATIHTYRQFEQLIWLSVKAASLARHAQPGQVALVRHSQPGLDPLLWTTLFLAGA
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCC
DPATGTVEFLIDPRDPAVIWLSDLSPGTALDLCVPGGKHFSLKPTTQTLLLAGTGAALPA
CCCCCEEEEEECCCCCEEEEEECCCCCCEEEEECCCCCEEEECCCCEEEEEEECCHHHHH
LLFLARQQAGRQNIALFMAGDTGFLPPPFLLPPTVEIQISQAGEATLFDLLTSSPQSPLR
HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCHH
WADQIGLALPPTMLALAANVIRSTRLRWQPGLAQVVVAGSLPCGIGVCRACQIETRHGWQ
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHEEEEECCCCHH
RRCVEGPVFDLYDLRLSL
HHHCCCCCEEEEEEEECC
>Mature Secondary Structure
MHLYHTATIHTYRQFEQLIWLSVKAASLARHAQPGQVALVRHSQPGLDPLLWTTLFLAGA
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCC
DPATGTVEFLIDPRDPAVIWLSDLSPGTALDLCVPGGKHFSLKPTTQTLLLAGTGAALPA
CCCCCEEEEEECCCCCEEEEEECCCCCCEEEEECCCCCEEEECCCCEEEEEEECCHHHHH
LLFLARQQAGRQNIALFMAGDTGFLPPPFLLPPTVEIQISQAGEATLFDLLTSSPQSPLR
HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCHH
WADQIGLALPPTMLALAANVIRSTRLRWQPGLAQVVVAGSLPCGIGVCRACQIETRHGWQ
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHEEEEECCCCHH
RRCVEGPVFDLYDLRLSL
HHHCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA