| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is hepT [H]
Identifier: 222525750
GI number: 222525750
Start: 3142190
End: 3143107
Strand: Reverse
Name: hepT [H]
Synonym: Chy400_2501
Alternate gene names: 222525750
Gene position: 3143107-3142190 (Counterclockwise)
Preceding gene: 222525753
Following gene: 222525749
Centisome position: 59.65
GC content: 57.19
Gene sequence:
>918_bases ATGACCTTCGCTATCCCATCAGAATTGCATCACGATCTGTTGCGGGTTGAGCAGATTCTTCAAGAGCGGATGCGAGCGCG CTATAGCGTTATTGCAATGGTTAATCCACACGTAGTTACTGACGCAACAGATCGGTTGCGGGCACTCGTTGTGCTGGCGG TTGCCCGGTTGGGCAACTACACCGATGCACAGGTAGTCCATGCGGCTGCTGCCGTTGAATTGATTGAAGCAGCAACCCGT GCGCATGACACCTTGATTGATGAACACGCCCGACGGACAGGTCGCGGAGCGAACGGATCGTGGGATCATGGTGTCGTCCT GATGATAGGTGACTACCTCTTTGCCCTGGCTGCCGGCGAAATGGCACGCAGCCCTGATCCACGGATTATCAGTCTCTATT CACAGGCAGTCATGCAGGTTTGTGAAGGGCAGTTGATCACCATTACCAGCCTGACCCCGCCGGAAACAGCCCTGGCCACC TACTGGCAGCGCACTGAAGCGCTCTCAGGGGCATTACTGGCAGCAGCAGCCCAGGCCGGAATACTATGTGGCAATCTCCC GGATACGTTGCTTGAGCCAGCAGCACGGTTTGGTATGCATCTGGGGCTGGCGCGGCGTCTGGCGACCGAAATTCGCGATC TGGAAGCGGAAGGCAGACTGTTACAGGCGGGTAATATTCCGCTGGCGCTCCTGTTTGCGGCCACCGAACCGCTGGCCCCA GAAGTACAAGCGGTATTTGATCATCCCACTCCAGCAACGATTGCCGCCGTCTTACCGCTGATTCGCAACCACGGGCTACC GAAGGCACGTGCCGCACTTATTGAACAACAACACGCAGCCCGGCAGGCGCTCCAACAGTTGCCTGCCGGCAGCACAACTG CCTGGTTGAACCAATTGATCGATGAGACTGGCGCATAA
Upstream 100 bases:
>100_bases AGACGGGGAGCGTCGCTGCACCAGTCGCGGTTGACAGTGGTACAGGGATAGCGTATCTTTCCTAGTAATGGGCGATAAAA CATAGCTAAAGTGACAGACC
Downstream 100 bases:
>100_bases GAGACCTGAATGCCTGTGTTATAATGCGACGGCTAAGCAAGCAATGCTGCTTTCAATTCGGCAGGAGTGTCTATGTACCG TTCACATACCTGTGGTGAGT
Product: polyprenyl synthetase
Products: NA
Alternate protein names: HEPPP synthase subunit 2 [H]
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTFAIPSELHHDLLRVEQILQERMRARYSVIAMVNPHVVTDATDRLRALVVLAVARLGNYTDAQVVHAAAAVELIEAATR AHDTLIDEHARRTGRGANGSWDHGVVLMIGDYLFALAAGEMARSPDPRIISLYSQAVMQVCEGQLITITSLTPPETALAT YWQRTEALSGALLAAAAQAGILCGNLPDTLLEPAARFGMHLGLARRLATEIRDLEAEGRLLQAGNIPLALLFAATEPLAP EVQAVFDHPTPATIAAVLPLIRNHGLPKARAALIEQQHAARQALQQLPAGSTTAWLNQLIDETGA
Sequences:
>Translated_305_residues MTFAIPSELHHDLLRVEQILQERMRARYSVIAMVNPHVVTDATDRLRALVVLAVARLGNYTDAQVVHAAAAVELIEAATR AHDTLIDEHARRTGRGANGSWDHGVVLMIGDYLFALAAGEMARSPDPRIISLYSQAVMQVCEGQLITITSLTPPETALAT YWQRTEALSGALLAAAAQAGILCGNLPDTLLEPAARFGMHLGLARRLATEIRDLEAEGRLLQAGNIPLALLFAATEPLAP EVQAVFDHPTPATIAAVLPLIRNHGLPKARAALIEQQHAARQALQQLPAGSTTAWLNQLIDETGA >Mature_304_residues TFAIPSELHHDLLRVEQILQERMRARYSVIAMVNPHVVTDATDRLRALVVLAVARLGNYTDAQVVHAAAAVELIEAATRA HDTLIDEHARRTGRGANGSWDHGVVLMIGDYLFALAAGEMARSPDPRIISLYSQAVMQVCEGQLITITSLTPPETALATY WQRTEALSGALLAAAAQAGILCGNLPDTLLEPAARFGMHLGLARRLATEIRDLEAEGRLLQAGNIPLALLFAATEPLAPE VQAVFDHPTPATIAAVLPLIRNHGLPKARAALIEQQHAARQALQQLPAGSTTAWLNQLIDETGA
Specific function: Supplies heptaprenyl diphosphate, the precursor for the side chain of the isoprenoid quinone menaquinone-7 (MQ-7) [H]
COG id: COG0142
COG function: function code H; Geranylgeranyl pyrophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FPP/GGPP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1789578, Length=302, Percent_Identity=24.1721854304636, Blast_Score=84, Evalue=9e-18, Organism=Drosophila melanogaster, GI24651612, Length=244, Percent_Identity=26.6393442622951, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014119 - InterPro: IPR000092 - InterPro: IPR017446 - InterPro: IPR008949 [H]
Pfam domain/function: PF00348 polyprenyl_synt [H]
EC number: =2.5.1.30 [H]
Molecular weight: Translated: 32782; Mature: 32651
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFAIPSELHHDLLRVEQILQERMRARYSVIAMVNPHVVTDATDRLRALVVLAVARLGNY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEECCHHHHHHHHHHHHHHHHCCC TDAQVVHAAAAVELIEAATRAHDTLIDEHARRTGRGANGSWDHGVVLMIGDYLFALAAGE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHH MARSPDPRIISLYSQAVMQVCEGQLITITSLTPPETALATYWQRTEALSGALLAAAAQAG HHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC ILCGNLPDTLLEPAARFGMHLGLARRLATEIRDLEAEGRLLQAGNIPLALLFAATEPLAP CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCH EVQAVFDHPTPATIAAVLPLIRNHGLPKARAALIEQQHAARQALQQLPAGSTTAWLNQLI HHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DETGA HHCCC >Mature Secondary Structure TFAIPSELHHDLLRVEQILQERMRARYSVIAMVNPHVVTDATDRLRALVVLAVARLGNY CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEECCHHHHHHHHHHHHHHHHCCC TDAQVVHAAAAVELIEAATRAHDTLIDEHARRTGRGANGSWDHGVVLMIGDYLFALAAGE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHH MARSPDPRIISLYSQAVMQVCEGQLITITSLTPPETALATYWQRTEALSGALLAAAAQAG HHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC ILCGNLPDTLLEPAARFGMHLGLARRLATEIRDLEAEGRLLQAGNIPLALLFAATEPLAP CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCH EVQAVFDHPTPATIAAVLPLIRNHGLPKARAALIEQQHAARQALQQLPAGSTTAWLNQLI HHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DETGA HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7629164 [H]