| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525721
Identifier: 222525721
GI number: 222525721
Start: 3119726
End: 3120532
Strand: Direct
Name: 222525721
Synonym: Chy400_2472
Alternate gene names: NA
Gene position: 3119726-3120532 (Clockwise)
Preceding gene: 222525720
Following gene: 222525722
Centisome position: 59.21
GC content: 53.9
Gene sequence:
>807_bases ATGAGTGTCTTCGCAACATTCGCTAGTCAGACCAGAATCCAGGCAATTCTGGTAATGCAGACGGCTTTGTCTGTGAGCAG CCGCCTCTCTCTGGAGCCAACTGGTACTGACATGCCTGTGATCAAAGGACCGGATGGTCTGCCCTTCATTCCCGGCTCTT CCATTAAGGGCGTGGTGCGTTTCCAGGTGGAACGAATCCTGCGCACCTGGGATCGTAGACCAGATTTTTGGGCATGTGAT CCTTTTGACGCCCCATGCATTCCGGCTAAGAAGAAGGAACAGCTCCTGAACGACGCGGAAACAGACCAGTCCTTCGCCGA GACTGTCTGGAAAGAGAGTTGCACCGCCTGTCGTCTTTTCGGATCTCCCTGGTTTGCTGGACGGGTTGCTTTCAGGGATG CGTATTTGCTTAACCCAGAAGACCTGCCAACGCTCACTCAGATCCGTGACGGCGTGGGTATTGATCGAGATCTGGGCACA GCTCGTTCAGGTATCAAGTACGATTTTGAGACTGTGATTCCCGGGGCGCGCTTCGGTCTGGAGATCCTGGCCGAGAACCT GGAAGAGTGGGAAATTGGTTTTCTCCTCACAGTCTTGCGGCTTTGGGAGGAGGGTGGTATTGCAATTGGTGGTAAGACTA CCCGCGGTCCGGGCTGGGGAAAACTTCAAGAAATCAAGATACAGCGAGTAGGTATCAGCAATTTGATGGACTATCTGCTA GAGCGCAAGTCGAGTGAGGTGGCTGCGACGCAGTTTCTGCAAACGTTCCGCGAGTGGCTGAAGGAAAGGGGGGCAGGCGA TGCATAA
Upstream 100 bases:
>100_bases TTGGCGATGTACACATGGAACTGGTGCGGCGCACGCTTGGCTATACAGTGCGCTGGCACGTCTGGGATGCTAAGGGAACG ACTCAGCGAGAGGTTAAGCA
Downstream 100 bases:
>100_bases GACACGATATAACGCTCTCAGTGTAGCCTTCCAGATCAGTCCCCGCGGTCCTTTACTGATCAAAGCTGGTGGCATTTCTG CTAACCCTACATTGCCAGAT
Product: CRISPR-associated RAMP protein
Products: NA
Alternate protein names: CRISPR-Associated RAMP Protein; Crispr-Associated Ramp Protein
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSVFATFASQTRIQAILVMQTALSVSSRLSLEPTGTDMPVIKGPDGLPFIPGSSIKGVVRFQVERILRTWDRRPDFWACD PFDAPCIPAKKKEQLLNDAETDQSFAETVWKESCTACRLFGSPWFAGRVAFRDAYLLNPEDLPTLTQIRDGVGIDRDLGT ARSGIKYDFETVIPGARFGLEILAENLEEWEIGFLLTVLRLWEEGGIAIGGKTTRGPGWGKLQEIKIQRVGISNLMDYLL ERKSSEVAATQFLQTFREWLKERGAGDA
Sequences:
>Translated_268_residues MSVFATFASQTRIQAILVMQTALSVSSRLSLEPTGTDMPVIKGPDGLPFIPGSSIKGVVRFQVERILRTWDRRPDFWACD PFDAPCIPAKKKEQLLNDAETDQSFAETVWKESCTACRLFGSPWFAGRVAFRDAYLLNPEDLPTLTQIRDGVGIDRDLGT ARSGIKYDFETVIPGARFGLEILAENLEEWEIGFLLTVLRLWEEGGIAIGGKTTRGPGWGKLQEIKIQRVGISNLMDYLL ERKSSEVAATQFLQTFREWLKERGAGDA >Mature_267_residues SVFATFASQTRIQAILVMQTALSVSSRLSLEPTGTDMPVIKGPDGLPFIPGSSIKGVVRFQVERILRTWDRRPDFWACDP FDAPCIPAKKKEQLLNDAETDQSFAETVWKESCTACRLFGSPWFAGRVAFRDAYLLNPEDLPTLTQIRDGVGIDRDLGTA RSGIKYDFETVIPGARFGLEILAENLEEWEIGFLLTVLRLWEEGGIAIGGKTTRGPGWGKLQEIKIQRVGISNLMDYLLE RKSSEVAATQFLQTFREWLKERGAGDA
Specific function: Unknown
COG id: COG1337
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29922; Mature: 29790
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVFATFASQTRIQAILVMQTALSVSSRLSLEPTGTDMPVIKGPDGLPFIPGSSIKGVVR CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHH FQVERILRTWDRRPDFWACDPFDAPCIPAKKKEQLLNDAETDQSFAETVWKESCTACRLF HHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEC GSPWFAGRVAFRDAYLLNPEDLPTLTQIRDGVGIDRDLGTARSGIKYDFETVIPGARFGL CCCCHHHHHHHCCEEEECCCCCCHHHHHHHCCCCCCCCHHHHCCCCCCHHHHCCCHHHHH EILAENLEEWEIGFLLTVLRLWEEGGIAIGGKTTRGPGWGKLQEIKIQRVGISNLMDYLL HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHH ERKSSEVAATQFLQTFREWLKERGAGDA HCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SVFATFASQTRIQAILVMQTALSVSSRLSLEPTGTDMPVIKGPDGLPFIPGSSIKGVVR CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHH FQVERILRTWDRRPDFWACDPFDAPCIPAKKKEQLLNDAETDQSFAETVWKESCTACRLF HHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCEEEEC GSPWFAGRVAFRDAYLLNPEDLPTLTQIRDGVGIDRDLGTARSGIKYDFETVIPGARFGL CCCCHHHHHHHCCEEEECCCCCCHHHHHHHCCCCCCCCHHHHCCCCCCHHHHCCCHHHHH EILAENLEEWEIGFLLTVLRLWEEGGIAIGGKTTRGPGWGKLQEIKIQRVGISNLMDYLL HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHH ERKSSEVAATQFLQTFREWLKERGAGDA HCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA