| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525717
Identifier: 222525717
GI number: 222525717
Start: 3115759
End: 3117423
Strand: Direct
Name: 222525717
Synonym: Chy400_2468
Alternate gene names: NA
Gene position: 3115759-3117423 (Clockwise)
Preceding gene: 222525707
Following gene: 222525718
Centisome position: 59.13
GC content: 47.75
Gene sequence:
>1665_bases ATGAGCAAAAGTGGACAACAGATACTTCTGCACGGTGATGTAGATGCTATCAAAGAGTTCGTTTTTGAAACATCTTCTCT GCCTCAGATTCGTGGCGGCAGTCAACTGCTCCTGGAATGCGAAGATGAGGTTACGAAAAAGATTGAAAAGCTGGGTGGAA AGAAAATTTATTGCTCAGGAGGCAGCTTCCTTTTCGAGCTTCCAGAAGACAAAGTTAATGATGCCAGGGAAGCTATTGAG GATATTTACTTGAAGCATACGCTAACTGCTACAGTGACAATCTCTCATGAAAGTGACCCATTACCTCCTGCGCCTGCAAG TCATCCTCACAATGGATGGTCAAAGCGGCTTTGGGATGCTCATCAACCAACTCTGCAGAGCGGCGATTTTGCTCGACGAG TGGCTTTTCTGAGTGCCCAGGTTCGTAGAATGAAGTATCAGAGGTCAAACTCCCCTTTCTTCGAGGCTATCCCCTTTGGC AAGAGGTGCGAAGCATGTGGTAAAAGAGTTGCCGTAGAGAACGTTCACCGTTACGAACCTGAAGAGCAAGAACAAGTCGA GATAGTATCATTATGTGTAGTCTGTTTGCAACGGCACAGAACAGGAGTGCGAAGCGAAGCACACACTGTTCGGGGCCGAT TTAATGTGCGTTTTTATCAAAAATACCGGCAATGCAATCTTACAGCCAGGCATCCTCCAGATTTAGACCATTTAGTGAAG AGTGCTCGTCGTAACTATGTGGCGTTTCTCTATGCCGATGGGAACGATATTGGCCAGTTGCTGCAACGGGTTAGTAGTCA GGAGGAATTTGCAGCTCTTTCACAAGCATTAAGGGAAGGAACTGAACAGGCCCTGTTTGAGGCTTTATGGGAGGTATGCA GCGAGGAATTGCAGAAAGTTGACAGATACTGGCCCTTTGAAATTGTTAATATTGGTGGTGATGACGTAACACTCTTGATC CAGGCAGGTTATGCCTGGGAAGTAGCAATACGGTTCCTGGAGCGGTTTGAAAAAGAGATTAAGAGCCGGGTGACACAAAA CTTGGGCTATTGGCCGCAGAGCTGGCCGCAAGCAGTTACAGCCTCGTGTGGGATTGCCGTTGCTGATGTCAAGCATCCAG TTCGCTATCTGGAGTATCTCGCTAACGATCTACTCAGGAGTGCTAAAAGAGAAGCCAAAATGGTTCAAGCACATCCTCAG AGTGCATTAACTTTTCTCTGGCTACCTACTCCTATCGCTGCAGAAAAGGCTGAGGCTTTGATGAGCTACTACCAGCGTGA TATTAATAGACTCACAGCCAGGCCGTACAGCCTTGATCGGGCCAGAAAGTCCATCGCACTGGTAAAGGAAGCATCCCGAT GGCCTAGGTCTTTACGCCATCGATGGGGTGAAATGTTAGACAGGGGAATGTGGATCTCGCTCAACATGATTTACTACGAC ATTGCCCGTAGAAGCGATCAAGATCGTCTCCAATTGACCACCTTTTTATCGGAGGTGGGCGAACTAGCCACACAGCAGGG TTATCAAACTAAAGCACCCTCATCTCTCTGGCAAGTATACAAAAAGCATAGTAGGGTTGGCTGGCAAACTGCCCTGCTCG ATATCCTGGAACTGGCCGAATTGCGGGCAATGCGGGCTGATGTTCAGATAGAGGAGCAAGACTAA
Upstream 100 bases:
>100_bases GAATTAGCAGGAACATTCAGCACGACTGTCGATCCCTTGTGTGCTTCTTGCTGGTATTTCTGGTGGGGGGTGTTATTGTT ATTTTACTGGAGAGGCCTCT
Downstream 100 bases:
>100_bases TGGAGCGTTTATCCTTGAAATTTTACTTTACTCTAACAACAGCTTTTCATACCGCAGGGAATCGATGGCGATGGGGAGCT GATAAGGCATTGTCAAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase; Crm2 Family CRISPR-Associated Protein; Hydrolase Of HD Superfamily-Like Protein
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MSKSGQQILLHGDVDAIKEFVFETSSLPQIRGGSQLLLECEDEVTKKIEKLGGKKIYCSGGSFLFELPEDKVNDAREAIE DIYLKHTLTATVTISHESDPLPPAPASHPHNGWSKRLWDAHQPTLQSGDFARRVAFLSAQVRRMKYQRSNSPFFEAIPFG KRCEACGKRVAVENVHRYEPEEQEQVEIVSLCVVCLQRHRTGVRSEAHTVRGRFNVRFYQKYRQCNLTARHPPDLDHLVK SARRNYVAFLYADGNDIGQLLQRVSSQEEFAALSQALREGTEQALFEALWEVCSEELQKVDRYWPFEIVNIGGDDVTLLI QAGYAWEVAIRFLERFEKEIKSRVTQNLGYWPQSWPQAVTASCGIAVADVKHPVRYLEYLANDLLRSAKREAKMVQAHPQ SALTFLWLPTPIAAEKAEALMSYYQRDINRLTARPYSLDRARKSIALVKEASRWPRSLRHRWGEMLDRGMWISLNMIYYD IARRSDQDRLQLTTFLSEVGELATQQGYQTKAPSSLWQVYKKHSRVGWQTALLDILELAELRAMRADVQIEEQD
Sequences:
>Translated_554_residues MSKSGQQILLHGDVDAIKEFVFETSSLPQIRGGSQLLLECEDEVTKKIEKLGGKKIYCSGGSFLFELPEDKVNDAREAIE DIYLKHTLTATVTISHESDPLPPAPASHPHNGWSKRLWDAHQPTLQSGDFARRVAFLSAQVRRMKYQRSNSPFFEAIPFG KRCEACGKRVAVENVHRYEPEEQEQVEIVSLCVVCLQRHRTGVRSEAHTVRGRFNVRFYQKYRQCNLTARHPPDLDHLVK SARRNYVAFLYADGNDIGQLLQRVSSQEEFAALSQALREGTEQALFEALWEVCSEELQKVDRYWPFEIVNIGGDDVTLLI QAGYAWEVAIRFLERFEKEIKSRVTQNLGYWPQSWPQAVTASCGIAVADVKHPVRYLEYLANDLLRSAKREAKMVQAHPQ SALTFLWLPTPIAAEKAEALMSYYQRDINRLTARPYSLDRARKSIALVKEASRWPRSLRHRWGEMLDRGMWISLNMIYYD IARRSDQDRLQLTTFLSEVGELATQQGYQTKAPSSLWQVYKKHSRVGWQTALLDILELAELRAMRADVQIEEQD >Mature_553_residues SKSGQQILLHGDVDAIKEFVFETSSLPQIRGGSQLLLECEDEVTKKIEKLGGKKIYCSGGSFLFELPEDKVNDAREAIED IYLKHTLTATVTISHESDPLPPAPASHPHNGWSKRLWDAHQPTLQSGDFARRVAFLSAQVRRMKYQRSNSPFFEAIPFGK RCEACGKRVAVENVHRYEPEEQEQVEIVSLCVVCLQRHRTGVRSEAHTVRGRFNVRFYQKYRQCNLTARHPPDLDHLVKS ARRNYVAFLYADGNDIGQLLQRVSSQEEFAALSQALREGTEQALFEALWEVCSEELQKVDRYWPFEIVNIGGDDVTLLIQ AGYAWEVAIRFLERFEKEIKSRVTQNLGYWPQSWPQAVTASCGIAVADVKHPVRYLEYLANDLLRSAKREAKMVQAHPQS ALTFLWLPTPIAAEKAEALMSYYQRDINRLTARPYSLDRARKSIALVKEASRWPRSLRHRWGEMLDRGMWISLNMIYYDI ARRSDQDRLQLTTFLSEVGELATQQGYQTKAPSSLWQVYKKHSRVGWQTALLDILELAELRAMRADVQIEEQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63661; Mature: 63530
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSGQQILLHGDVDAIKEFVFETSSLPQIRGGSQLLLECEDEVTKKIEKLGGKKIYCSG CCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCEEEECC GSFLFELPEDKVNDAREAIEDIYLKHTLTATVTISHESDPLPPAPASHPHNGWSKRLWDA CCEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCC HQPTLQSGDFARRVAFLSAQVRRMKYQRSNSPFFEAIPFGKRCEACGKRVAVENVHRYEP CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCC EEQEQVEIVSLCVVCLQRHRTGVRSEAHTVRGRFNVRFYQKYRQCNLTARHPPDLDHLVK CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEHHHHHHHHHCCCCCCCCCCHHHHHH SARRNYVAFLYADGNDIGQLLQRVSSQEEFAALSQALREGTEQALFEALWEVCSEELQKV HHCCCEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRYWPFEIVNIGGDDVTLLIQAGYAWEVAIRFLERFEKEIKSRVTQNLGYWPQSWPQAVT HCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH ASCGIAVADVKHPVRYLEYLANDLLRSAKREAKMVQAHPQSALTFLWLPTPIAAEKAEAL HHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHH MSYYQRDINRLTARPYSLDRARKSIALVKEASRWPRSLRHRWGEMLDRGMWISLNMIYYD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH IARRSDQDRLQLTTFLSEVGELATQQGYQTKAPSSLWQVYKKHSRVGWQTALLDILELAE HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH LRAMRADVQIEEQD HHHHHCCCEEECCC >Mature Secondary Structure SKSGQQILLHGDVDAIKEFVFETSSLPQIRGGSQLLLECEDEVTKKIEKLGGKKIYCSG CCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCEEEECC GSFLFELPEDKVNDAREAIEDIYLKHTLTATVTISHESDPLPPAPASHPHNGWSKRLWDA CCEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCC HQPTLQSGDFARRVAFLSAQVRRMKYQRSNSPFFEAIPFGKRCEACGKRVAVENVHRYEP CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCC EEQEQVEIVSLCVVCLQRHRTGVRSEAHTVRGRFNVRFYQKYRQCNLTARHPPDLDHLVK CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEHHHHHHHHHCCCCCCCCCCHHHHHH SARRNYVAFLYADGNDIGQLLQRVSSQEEFAALSQALREGTEQALFEALWEVCSEELQKV HHCCCEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRYWPFEIVNIGGDDVTLLIQAGYAWEVAIRFLERFEKEIKSRVTQNLGYWPQSWPQAVT HCCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH ASCGIAVADVKHPVRYLEYLANDLLRSAKREAKMVQAHPQSALTFLWLPTPIAAEKAEAL HHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHH MSYYQRDINRLTARPYSLDRARKSIALVKEASRWPRSLRHRWGEMLDRGMWISLNMIYYD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH IARRSDQDRLQLTTFLSEVGELATQQGYQTKAPSSLWQVYKKHSRVGWQTALLDILELAE HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH LRAMRADVQIEEQD HHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA