| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525680
Identifier: 222525680
GI number: 222525680
Start: 3066195
End: 3066884
Strand: Direct
Name: 222525680
Synonym: Chy400_2431
Alternate gene names: NA
Gene position: 3066195-3066884 (Clockwise)
Preceding gene: 222525673
Following gene: 222525681
Centisome position: 58.19
GC content: 58.26
Gene sequence:
>690_bases ATGCCGGTACCAGCGAGTTTCCTTCGCTTCACGGATCGCCGTGCAGCCGGACGGGCACTGGCCTGGAGTATGAGCCATTA TGCCGAACGTCCTGCGCTCCAGGTGTTGGCCTTACCACGAGGTGGTGTGCCGGTGGCATACGAGGTCGCCAGGGCACTGT CGGCACCGCTCGATGTCTTGCTGGTACGCAAGCTGGGTGTGCCTGGTCAGGTCGAACTGGCGATGGGGGCCATTGCTGAA GGTGGGGTGCGGGTGCTGAATCACGAGATTATCGCCGAGTTACGGATTCCGGCGTATGTGATTGAAGAGGTGGCTGCCCT TGAGCAGGTTGAAATTGAGCGGCGTGCCCGGAGTTATCGCGGACAACGTCCGCCACCTGAGTTGCGGGATAAGACGGTTA TCATTGTGGATGATGGTCTGGCAACCGGTGCGACCATGCACGCCGCAGTGGATTGTGTCCGCTTGCAACACCCACGCTGG ATCGCGGTTGCGGTGCCGGTCGCCAGTAAAGAATCGGTGCAGATACTGCGGTCGGTTGCCGATGATGTTGTGGCAGTACT GGTTGTTGAACCGTTTTATGCGCTGAGTTACTGGTACAATGACTTTCGACAGACCAGTGATGACGAGGTGCGGCAGTTAC TGCAAGCCGCTCAAGCAGATCACGCTGTAACCAACCACGAGGATACATGA
Upstream 100 bases:
>100_bases TCTGCGTTGATAGGCAGGTACTGGATTGATGCCTGCCTGCCGTAGTAATAGCTGGTATTCATCGCGCAGTGAGATCGTCC GTTCCCTTGAGGAGGCTCCT
Downstream 100 bases:
>100_bases TAGTTGTTCAGCTCTTAGGGCCACCGCGCATTGTGGTTGCCGATCACGCGGTTACATTGCCGCGGCGACGGAGCCGGGCT TTGCTCTACTACCTGGCAGC
Product: phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MPVPASFLRFTDRRAAGRALAWSMSHYAERPALQVLALPRGGVPVAYEVARALSAPLDVLLVRKLGVPGQVELAMGAIAE GGVRVLNHEIIAELRIPAYVIEEVAALEQVEIERRARSYRGQRPPPELRDKTVIIVDDGLATGATMHAAVDCVRLQHPRW IAVAVPVASKESVQILRSVADDVVAVLVVEPFYALSYWYNDFRQTSDDEVRQLLQAAQADHAVTNHEDT
Sequences:
>Translated_229_residues MPVPASFLRFTDRRAAGRALAWSMSHYAERPALQVLALPRGGVPVAYEVARALSAPLDVLLVRKLGVPGQVELAMGAIAE GGVRVLNHEIIAELRIPAYVIEEVAALEQVEIERRARSYRGQRPPPELRDKTVIIVDDGLATGATMHAAVDCVRLQHPRW IAVAVPVASKESVQILRSVADDVVAVLVVEPFYALSYWYNDFRQTSDDEVRQLLQAAQADHAVTNHEDT >Mature_228_residues PVPASFLRFTDRRAAGRALAWSMSHYAERPALQVLALPRGGVPVAYEVARALSAPLDVLLVRKLGVPGQVELAMGAIAEG GVRVLNHEIIAELRIPAYVIEEVAALEQVEIERRARSYRGQRPPPELRDKTVIIVDDGLATGATMHAAVDCVRLQHPRWI AVAVPVASKESVQILRSVADDVVAVLVVEPFYALSYWYNDFRQTSDDEVRQLLQAAQADHAVTNHEDT
Specific function: Unknown
COG id: COG1926
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the N-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007815 - InterPro: IPR000836 [H]
Pfam domain/function: PF05139 Erythro_esteras; PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 25186; Mature: 25055
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVPASFLRFTDRRAAGRALAWSMSHYAERPALQVLALPRGGVPVAYEVARALSAPLDVL CCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHH LVRKLGVPGQVELAMGAIAEGGVRVLNHEIIAELRIPAYVIEEVAALEQVEIERRARSYR HHHHCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC GQRPPPELRDKTVIIVDDGLATGATMHAAVDCVRLQHPRWIAVAVPVASKESVQILRSVA CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHH DDVVAVLVVEPFYALSYWYNDFRQTSDDEVRQLLQAAQADHAVTNHEDT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PVPASFLRFTDRRAAGRALAWSMSHYAERPALQVLALPRGGVPVAYEVARALSAPLDVL CCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCHHHH LVRKLGVPGQVELAMGAIAEGGVRVLNHEIIAELRIPAYVIEEVAALEQVEIERRARSYR HHHHCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC GQRPPPELRDKTVIIVDDGLATGATMHAAVDCVRLQHPRWIAVAVPVASKESVQILRSVA CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHH DDVVAVLVVEPFYALSYWYNDFRQTSDDEVRQLLQAAQADHAVTNHEDT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]