| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525675
Identifier: 222525675
GI number: 222525675
Start: 3062173
End: 3062565
Strand: Reverse
Name: 222525675
Synonym: Chy400_2426
Alternate gene names: NA
Gene position: 3062565-3062173 (Counterclockwise)
Preceding gene: 222525676
Following gene: 222525674
Centisome position: 58.12
GC content: 46.56
Gene sequence:
>393_bases GTGATTGTACTTGATACTCACATCTGGATTTGGTGGGTGCATGACCCGTCGCAACTCACACAGGCGCAAATTGAAGCGAT TACGAATAACGAAACGGAACTGATTGGTATCAGTGCCATTTCATGCTGGGAAGTTGCTAAACTTGTGGAATACAAACGTC TGGAATTGCCCTTGCCTTTAGAAGAGTGGTTTGAACAGGCATTGAGCTATCCTGGGATGCAGCTTCTTGCACTAACGCCA GAGATTGCTATCGAGTCAACGCGCTTACCAACCCCATTCCATCGCGATCCAGCAGACCAGATCATTGTTGCAACCGCAAG AATTTACGGATGTCCACTGGTAACATCTGATGAGAAGATATTGCAGTATCCGCACGTGGTAACAATTGGATGA
Upstream 100 bases:
>100_bases TCCAACGAGCAGGCGTCGAGCGATATCCCCTGCGTGGCAAGCCGATTCGCTATATCGACCCATTTGATAGTGTTGCACAC AATGACTGGGATGCATTGCA
Downstream 100 bases:
>100_bases ATACGTAAACGCCGCGCAACCAGCGTTCATCTGACGCCGCTTCGCTGCACTGCGCGGCACCAGTAAAGCGCAGGCCGCTG ACCCGCGGCGCTAACGAGTC
Product: PilT protein domain-containing protein
Products: NA
Alternate protein names: PilT Protein Domain Protein; Xin Of Toxin-Antitoxin System; PilT Protein-Like; PilT Protein N-Terminal; PilT Protein Domain-Containing Protein; PIN Domain-Containing Addiction Module
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MIVLDTHIWIWWVHDPSQLTQAQIEAITNNETELIGISAISCWEVAKLVEYKRLELPLPLEEWFEQALSYPGMQLLALTP EIAIESTRLPTPFHRDPADQIIVATARIYGCPLVTSDEKILQYPHVVTIG
Sequences:
>Translated_130_residues MIVLDTHIWIWWVHDPSQLTQAQIEAITNNETELIGISAISCWEVAKLVEYKRLELPLPLEEWFEQALSYPGMQLLALTP EIAIESTRLPTPFHRDPADQIIVATARIYGCPLVTSDEKILQYPHVVTIG >Mature_130_residues MIVLDTHIWIWWVHDPSQLTQAQIEAITNNETELIGISAISCWEVAKLVEYKRLELPLPLEEWFEQALSYPGMQLLALTP EIAIESTRLPTPFHRDPADQIIVATARIYGCPLVTSDEKILQYPHVVTIG
Specific function: Unknown
COG id: COG3744
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14804; Mature: 14804
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVLDTHIWIWWVHDPSQLTQAQIEAITNNETELIGISAISCWEVAKLVEYKRLELPLPL CEEEECEEEEEEEECHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCH EEWFEQALSYPGMQLLALTPEIAIESTRLPTPFHRDPADQIIVATARIYGCPLVTSDEKI HHHHHHHHCCCCEEEEEECCCCEEECCCCCCCCCCCCCHHEEEEEHHHHCCCEEECCHHH LQYPHVVTIG HHCCEEEEEC >Mature Secondary Structure MIVLDTHIWIWWVHDPSQLTQAQIEAITNNETELIGISAISCWEVAKLVEYKRLELPLPL CEEEECEEEEEEEECHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCH EEWFEQALSYPGMQLLALTPEIAIESTRLPTPFHRDPADQIIVATARIYGCPLVTSDEKI HHHHHHHHCCCCEEEEEECCCCEEECCCCCCCCCCCCCHHEEEEEHHHHCCCEEECCHHH LQYPHVVTIG HHCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA