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The map label for this gene is dppA [C]

Identifier: 222525660

GI number: 222525660

Start: 3037076

End: 3038851

Strand: Direct

Name: dppA [C]

Synonym: Chy400_2411

Alternate gene names: 222525660

Gene position: 3037076-3038851 (Clockwise)

Preceding gene: 222525659

Following gene: 222525665

Centisome position: 57.64

GC content: 55.07

Gene sequence:

>1776_bases
ATGAAGCGTTTTATAACATCATTGATCGCCAAGTTTGCGTTGATGGTGCTGGTGAGCTGCACGATTGTTGTCGATGTGCC
GACACCCACTCCGTTTGTGAGTACGGCGCTTCCAGAATCAACACCAACGGTAGTAAGAGAACAGGTGTTGCGCATCGGGA
TGGTGACCGAACCACCCGATCTGCTGCCGTATCACAGTAATCCCACCGATGAGCGTTTAACATCGCCACTGACTGAGTTG
ATCTTCCCATCACCTATGCTGGCAGTTGATTTCAAACTGCAACCAACCGGCGTGTTAACCCGCCTGCCCGCCTTCGCAAA
TGGTGATGTAATGACAGCAACCGTGACGGTCTTTCGTGATGCGTTGGGACAAATCTCGGAAACACCCACCGAAACGACCG
ATAATGTCACTCAGGTGAGCGTGACGTTTCACTGGAACCCCAATCTGCGCTGGGCTGATGGGACACCGGTGACCGCAGCC
GATTCGGTATTTGCCTACGAATTGGCACAACAGATCGACCTCGGTCAGGCGGCGAATAGTCGGCTGGCAATGACAGAACG
CTACGAGCAGATCGACGAATACACCACGCGAGCGGTGTTGCGCCCTGATGTTACCGATCCGGCGTATATCACCAGTTTTT
GGACGCCATTGCCGCGCCATCTGTTGGCCGATCTGGATGCACAGCAGATTGGTCAGAGTGAATTTGTCCGCCGTCCGCTG
GGGTATGGGCCATACACGATCAAAAGCTTTGAGGGGGGAACGCTCGAATTAGTCCGTAATCCGTTTTATTGGGGCGAGGC
AGCGCCGTTCGATACCATTGTTATTGCTTTTCGCAGTGAACCCGGTCAGTTGGTAGACCTGGTGCGTGGTGGCGGATTAG
ATCTGGCATTCATTGAGCAGCCAACACCGGCTTTGCTCGAGCAATTGCTGGCCCGTGCCGATCAACAAGAACTTCAGCTC
AGTACCTCGCCGAATACGATCTGGGAGCACCTCGATTTCAATCTTGATGTGCCATTGCTGCAAGATATTCGGGTTCGCCG
GGCCATTGCCCATGCCATCAATCGTTCGGCGCTCGTTGAACAGCTCCTCGGCGGGCGGAGCAATGTGTTGGAGAGCTGGA
TTCTACCAGGACAGCTCGGCGAACCGCCTCTCGACCAGATTACGCGCTATGCTTACAATCCCGACGAGGCCCGGCGTTTG
CTCGATGAAGCGGGGTTGTTTGATACCGATGGTGATAGCTGGCGTGAATATGAAGGTTTGCCAATTGTGCTGTCGTTGGT
GACCACGGCCAATTCGCCATTGCGCGAAGCGGTGGCAAGCCAGATTGCGAATGATCTGGCTCAAGTTGGTTTGAATATTG
AGGTCGTACCATTGCCGCCGGGCGAGTTGTACAGCACTGAAGGGCCGTTGTATCAGCGAACGTTCCAGTTAGCGCTGTTT
GGCTGGATTGCCGGTGCGCATCCGCGGGGTTGGGAGTTGTGGAGTTGCAGCGGGGTGCCGGGTGAAGCAAACAACTGGAC
GGGAAATAATTTTGCCGGTTGGTGCTTCTTCGAGGCGAATGAGGCCATTAATACGGCGACGACGGCGCTTGATCCCAATG
AGCAGATTGCTGCCTACCTCCGCCAGCAACAGCTCTTCACGCAGGAGGTACCGGTGTTGCCACTCTTTCAGCGGATTGAT
GCGCTGATTGCCCGTCCTGGTTTGAGCGGCTGGCGGCTCAATCCAACGGCACCGTTCACGTGGAATATCCAGGAGTGGCG
GTTTGCCGGTGAGTAA

Upstream 100 bases:

>100_bases
TGCAGTCGTATCCATCCGGCAACGTCGCATTCGTTCATCAAGAACGTACCCACATGCGGTAAGGCAGGTAGTTACTCGGT
ACAATAGAAAAGATTACGCC

Downstream 100 bases:

>100_bases
GATCATATCTTGATGGATAACCCAGATTGCTCCCTTTGTCACCACAGAGACACGGAGGACACAGAGAATGCGGATAACCC
GGGTGGCTACCGTGAGGCGT

Product: family 5 extracellular solute-binding protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 591; Mature: 591

Protein sequence:

>591_residues
MKRFITSLIAKFALMVLVSCTIVVDVPTPTPFVSTALPESTPTVVREQVLRIGMVTEPPDLLPYHSNPTDERLTSPLTEL
IFPSPMLAVDFKLQPTGVLTRLPAFANGDVMTATVTVFRDALGQISETPTETTDNVTQVSVTFHWNPNLRWADGTPVTAA
DSVFAYELAQQIDLGQAANSRLAMTERYEQIDEYTTRAVLRPDVTDPAYITSFWTPLPRHLLADLDAQQIGQSEFVRRPL
GYGPYTIKSFEGGTLELVRNPFYWGEAAPFDTIVIAFRSEPGQLVDLVRGGGLDLAFIEQPTPALLEQLLARADQQELQL
STSPNTIWEHLDFNLDVPLLQDIRVRRAIAHAINRSALVEQLLGGRSNVLESWILPGQLGEPPLDQITRYAYNPDEARRL
LDEAGLFDTDGDSWREYEGLPIVLSLVTTANSPLREAVASQIANDLAQVGLNIEVVPLPPGELYSTEGPLYQRTFQLALF
GWIAGAHPRGWELWSCSGVPGEANNWTGNNFAGWCFFEANEAINTATTALDPNEQIAAYLRQQQLFTQEVPVLPLFQRID
ALIARPGLSGWRLNPTAPFTWNIQEWRFAGE

Sequences:

>Translated_591_residues
MKRFITSLIAKFALMVLVSCTIVVDVPTPTPFVSTALPESTPTVVREQVLRIGMVTEPPDLLPYHSNPTDERLTSPLTEL
IFPSPMLAVDFKLQPTGVLTRLPAFANGDVMTATVTVFRDALGQISETPTETTDNVTQVSVTFHWNPNLRWADGTPVTAA
DSVFAYELAQQIDLGQAANSRLAMTERYEQIDEYTTRAVLRPDVTDPAYITSFWTPLPRHLLADLDAQQIGQSEFVRRPL
GYGPYTIKSFEGGTLELVRNPFYWGEAAPFDTIVIAFRSEPGQLVDLVRGGGLDLAFIEQPTPALLEQLLARADQQELQL
STSPNTIWEHLDFNLDVPLLQDIRVRRAIAHAINRSALVEQLLGGRSNVLESWILPGQLGEPPLDQITRYAYNPDEARRL
LDEAGLFDTDGDSWREYEGLPIVLSLVTTANSPLREAVASQIANDLAQVGLNIEVVPLPPGELYSTEGPLYQRTFQLALF
GWIAGAHPRGWELWSCSGVPGEANNWTGNNFAGWCFFEANEAINTATTALDPNEQIAAYLRQQQLFTQEVPVLPLFQRID
ALIARPGLSGWRLNPTAPFTWNIQEWRFAGE
>Mature_591_residues
MKRFITSLIAKFALMVLVSCTIVVDVPTPTPFVSTALPESTPTVVREQVLRIGMVTEPPDLLPYHSNPTDERLTSPLTEL
IFPSPMLAVDFKLQPTGVLTRLPAFANGDVMTATVTVFRDALGQISETPTETTDNVTQVSVTFHWNPNLRWADGTPVTAA
DSVFAYELAQQIDLGQAANSRLAMTERYEQIDEYTTRAVLRPDVTDPAYITSFWTPLPRHLLADLDAQQIGQSEFVRRPL
GYGPYTIKSFEGGTLELVRNPFYWGEAAPFDTIVIAFRSEPGQLVDLVRGGGLDLAFIEQPTPALLEQLLARADQQELQL
STSPNTIWEHLDFNLDVPLLQDIRVRRAIAHAINRSALVEQLLGGRSNVLESWILPGQLGEPPLDQITRYAYNPDEARRL
LDEAGLFDTDGDSWREYEGLPIVLSLVTTANSPLREAVASQIANDLAQVGLNIEVVPLPPGELYSTEGPLYQRTFQLALF
GWIAGAHPRGWELWSCSGVPGEANNWTGNNFAGWCFFEANEAINTATTALDPNEQIAAYLRQQQLFTQEVPVLPLFQRID
ALIARPGLSGWRLNPTAPFTWNIQEWRFAGE

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789966, Length=462, Percent_Identity=22.5108225108225, Blast_Score=89, Evalue=8e-19,
Organism=Escherichia coli, GI1787551, Length=353, Percent_Identity=27.4787535410765, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1787762, Length=464, Percent_Identity=21.3362068965517, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1789887, Length=253, Percent_Identity=24.5059288537549, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1787052, Length=353, Percent_Identity=24.0793201133144, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 65638; Mature: 65638

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFITSLIAKFALMVLVSCTIVVDVPTPTPFVSTALPESTPTVVREQVLRIGMVTEPPD
CHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCC
LLPYHSNPTDERLTSPLTELIFPSPMLAVDFKLQPTGVLTRLPAFANGDVMTATVTVFRD
CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHCCCCCCCCEEEHHHHHHHH
ALGQISETPTETTDNVTQVSVTFHWNPNLRWADGTPVTAADSVFAYELAQQIDLGQAANS
HHHHHCCCCCCCCCCEEEEEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHCCCHHCCC
RLAMTERYEQIDEYTTRAVLRPDVTDPAYITSFWTPLPRHLLADLDAQQIGQSEFVRRPL
CHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHCHHHHHHHHCCCHHHCCHHHHHHCCC
GYGPYTIKSFEGGTLELVRNPFYWGEAAPFDTIVIAFRSEPGQLVDLVRGGGLDLAFIEQ
CCCCEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCEEEEECC
PTPALLEQLLARADQQELQLSTSPNTIWEHLDFNLDVPLLQDIRVRRAIAHAINRSALVE
CCHHHHHHHHHHCCHHHEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QLLGGRSNVLESWILPGQLGEPPLDQITRYAYNPDEARRLLDEAGLFDTDGDSWREYEGL
HHHCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHCCC
PIVLSLVTTANSPLREAVASQIANDLAQVGLNIEVVPLPPGELYSTEGPLYQRTFQLALF
EEEEEEEHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH
GWIAGAHPRGWELWSCSGVPGEANNWTGNNFAGWCFFEANEAINTATTALDPNEQIAAYL
HHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCHHHHHHHH
RQQQLFTQEVPVLPLFQRIDALIARPGLSGWRLNPTAPFTWNIQEWRFAGE
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECHHHCEECCC
>Mature Secondary Structure
MKRFITSLIAKFALMVLVSCTIVVDVPTPTPFVSTALPESTPTVVREQVLRIGMVTEPPD
CHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCC
LLPYHSNPTDERLTSPLTELIFPSPMLAVDFKLQPTGVLTRLPAFANGDVMTATVTVFRD
CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHCCCCCCCCEEEHHHHHHHH
ALGQISETPTETTDNVTQVSVTFHWNPNLRWADGTPVTAADSVFAYELAQQIDLGQAANS
HHHHHCCCCCCCCCCEEEEEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHCCCHHCCC
RLAMTERYEQIDEYTTRAVLRPDVTDPAYITSFWTPLPRHLLADLDAQQIGQSEFVRRPL
CHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHCHHHHHHHHCCCHHHCCHHHHHHCCC
GYGPYTIKSFEGGTLELVRNPFYWGEAAPFDTIVIAFRSEPGQLVDLVRGGGLDLAFIEQ
CCCCEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCEEEEECC
PTPALLEQLLARADQQELQLSTSPNTIWEHLDFNLDVPLLQDIRVRRAIAHAINRSALVE
CCHHHHHHHHHHCCHHHEEECCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QLLGGRSNVLESWILPGQLGEPPLDQITRYAYNPDEARRLLDEAGLFDTDGDSWREYEGL
HHHCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHCCC
PIVLSLVTTANSPLREAVASQIANDLAQVGLNIEVVPLPPGELYSTEGPLYQRTFQLALF
EEEEEEEHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH
GWIAGAHPRGWELWSCSGVPGEANNWTGNNFAGWCFFEANEAINTATTALDPNEQIAAYL
HHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCHHHHHHHH
RQQQLFTQEVPVLPLFQRIDALIARPGLSGWRLNPTAPFTWNIQEWRFAGE
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECHHHCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA