| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525633
Identifier: 222525633
GI number: 222525633
Start: 3011738
End: 3012115
Strand: Reverse
Name: 222525633
Synonym: Chy400_2384
Alternate gene names: NA
Gene position: 3012115-3011738 (Counterclockwise)
Preceding gene: 222525646
Following gene: 222525631
Centisome position: 57.17
GC content: 55.56
Gene sequence:
>378_bases ATGAGCAAAGTACACACCATCTCCATCTTGAAAGCACTTCAGGTCATCGGTATCGCTCTTCTGTTTCTGACAATTCTCAG CGCCTGCGGTGAACCGCTGCGTGAACGTAGCATTGAGGTAACAGCTACCGAAATGCGCTTTGATCCCGACCGCGTAGAGG CTCGCACCGGAGAACAGGTCTTCTTACGCTTACGCAACCGCGGCGAAATAGCGCATAGTCTGACCATTGAGCTACCCGCC GGAGACCGTACCGTCTCGGCTGATCCGGGTGTTGATGCGGTACTGGCCTTTCGCGCTCCAGCCCCTGGAGAGTACCGTTT CTACTGTCGTATTCCCGGCCATGAAGCCCAACAGGGTGTTCTGGTCGTTACCCCATGA
Upstream 100 bases:
>100_bases ACCACGCACCGTGATCGTGTCCAGCCCGGCTCGCCACACACTCAGCGAATATCTGGTAGAGTTATCATGCAAGAAAACAA TGTTTGAGTACGAGTGAGCT
Downstream 100 bases:
>100_bases TGACCGTCATTACGAGGTCGCCCAGTCACGCCGACGGATGGCGTTGATGGTCAGAATAGCCAGGGTGAGCAGCGTGATCG GCAAGACGAAGAGCATCATG
Product: blue (type 1) copper domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MSKVHTISILKALQVIGIALLFLTILSACGEPLRERSIEVTATEMRFDPDRVEARTGEQVFLRLRNRGEIAHSLTIELPA GDRTVSADPGVDAVLAFRAPAPGEYRFYCRIPGHEAQQGVLVVTP
Sequences:
>Translated_125_residues MSKVHTISILKALQVIGIALLFLTILSACGEPLRERSIEVTATEMRFDPDRVEARTGEQVFLRLRNRGEIAHSLTIELPA GDRTVSADPGVDAVLAFRAPAPGEYRFYCRIPGHEAQQGVLVVTP >Mature_124_residues SKVHTISILKALQVIGIALLFLTILSACGEPLRERSIEVTATEMRFDPDRVEARTGEQVFLRLRNRGEIAHSLTIELPAG DRTVSADPGVDAVLAFRAPAPGEYRFYCRIPGHEAQQGVLVVTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13710; Mature: 13579
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00196 COPPER_BLUE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVHTISILKALQVIGIALLFLTILSACGEPLRERSIEVTATEMRFDPDRVEARTGEQV CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEEEEECCHHHHHHCCCHHH FLRLRNRGEIAHSLTIELPAGDRTVSADPGVDAVLAFRAPAPGEYRFYCRIPGHEAQQGV EEEECCCCCEEEEEEEEECCCCEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCE LVVTP EEEEC >Mature Secondary Structure SKVHTISILKALQVIGIALLFLTILSACGEPLRERSIEVTATEMRFDPDRVEARTGEQV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEEEEECCHHHHHHCCCHHH FLRLRNRGEIAHSLTIELPAGDRTVSADPGVDAVLAFRAPAPGEYRFYCRIPGHEAQQGV EEEECCCCCEEEEEEEEECCCCEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCE LVVTP EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA