Click here to switch to the map view.

The map label for this gene is yfcH [C]

Identifier: 222525623

GI number: 222525623

Start: 2999615

End: 3000568

Strand: Direct

Name: yfcH [C]

Synonym: Chy400_2374

Alternate gene names: 222525623

Gene position: 2999615-3000568 (Clockwise)

Preceding gene: 222525622

Following gene: 222525624

Centisome position: 56.93

GC content: 62.89

Gene sequence:

>954_bases
ATGAGCACAAAACGCATTATCATCACCGGGGCAACTGGCCTCATCGGGCGCAGGCTGGTTGCCGAATTACGCAACGACTA
CCACCTGGTCATCTTCAGTCGTGACCCGGCGCGGGCACGGTCAACCCTGCCCGGTGCTGCCGATTATGTTGCCTGGCAGC
CATCTGAACAGGGGCCGTGGGCGGCTGCGGTTGATGGTGCCTGGGCGGTGGTTCATCTGGCCGGGGCACCGATTTCGACC
GGTTTGCTCGGCAAACGATGGACACCCGAATACAAGGCAGAGATTCGCGACAGTCGGGTGATTGGCACCCGTGGTATCGT
CAATGCCATCGCTGCCGCGTCGCAGCGACCCAGCGTCTTCGTCTGTGCGTCGGCGGTTGGCTACTACGGCCCGTATCGCG
ACAACACCCCGCTCACCGAAGATTCGCCGCCGGGACGTGATTTTCTGGCGCAGGTCTGCGTGGCGTGGGAAGCAGAAGCC
GTGCGTGCGGAAGAGTACGGCGTGCGCACCGTGCGCTTACGCACCGGTCTGGTGCTCGATCCCACATCGGGAGCGTTGCC
GCAGATTATGCTGCCCTTCAAGCTCATGACCGGCGGCCCCATCCTGCCCGGCACGCAGGTCTATCCCTGGATTCACCCTG
ACGACGAGGTAGGCTTAATTCGCTTTGCCCTGGAAAACGATCAGGTGCGTGGCCCGCTCAACGCTGCCGCGCCGGGGGCA
TTGTCCAACCGCGACTTCGCCGCTATCGTCGGCAAAGTGCTCGGCTCACCCTCCTGGCTACCGGTTCCTGAATTCAGTTT
GCGGATTGCCCTGGGCGAAATGGCCGATCTGGTCGTCTACGGCCAGAATGCCGTTCCCCGCAAAGCTCTCGACCTCGGCT
ACCAGTTCCGGTTTCCCACATTGGAACCGGCCCTCCGCGATCTGCTCGATCTGCCGGAGCCGGTGAAGCGCTGA

Upstream 100 bases:

>100_bases
CTATTCGGCGCTGGACGATGTACGGCTCATCCATAGTAACGCACGGCTTCAGCAAAGGCCGACCATTGACAGCGTTACGT
ATGCAGGGTACGATGATAAT

Downstream 100 bases:

>100_bases
GCGGGGTAGGGGTGGGGGAACTTTGAGTTAGGCAGATACATCGTTTCGGCGGCACGAGTTTCCTTCACGGTCAAACGGTT
GTATTTCTTACTGAGATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSTKRIIITGATGLIGRRLVAELRNDYHLVIFSRDPARARSTLPGAADYVAWQPSEQGPWAAAVDGAWAVVHLAGAPIST
GLLGKRWTPEYKAEIRDSRVIGTRGIVNAIAAASQRPSVFVCASAVGYYGPYRDNTPLTEDSPPGRDFLAQVCVAWEAEA
VRAEEYGVRTVRLRTGLVLDPTSGALPQIMLPFKLMTGGPILPGTQVYPWIHPDDEVGLIRFALENDQVRGPLNAAAPGA
LSNRDFAAIVGKVLGSPSWLPVPEFSLRIALGEMADLVVYGQNAVPRKALDLGYQFRFPTLEPALRDLLDLPEPVKR

Sequences:

>Translated_317_residues
MSTKRIIITGATGLIGRRLVAELRNDYHLVIFSRDPARARSTLPGAADYVAWQPSEQGPWAAAVDGAWAVVHLAGAPIST
GLLGKRWTPEYKAEIRDSRVIGTRGIVNAIAAASQRPSVFVCASAVGYYGPYRDNTPLTEDSPPGRDFLAQVCVAWEAEA
VRAEEYGVRTVRLRTGLVLDPTSGALPQIMLPFKLMTGGPILPGTQVYPWIHPDDEVGLIRFALENDQVRGPLNAAAPGA
LSNRDFAAIVGKVLGSPSWLPVPEFSLRIALGEMADLVVYGQNAVPRKALDLGYQFRFPTLEPALRDLLDLPEPVKR
>Mature_316_residues
STKRIIITGATGLIGRRLVAELRNDYHLVIFSRDPARARSTLPGAADYVAWQPSEQGPWAAAVDGAWAVVHLAGAPISTG
LLGKRWTPEYKAEIRDSRVIGTRGIVNAIAAASQRPSVFVCASAVGYYGPYRDNTPLTEDSPPGRDFLAQVCVAWEAEAV
RAEEYGVRTVRLRTGLVLDPTSGALPQIMLPFKLMTGGPILPGTQVYPWIHPDDEVGLIRFALENDQVRGPLNAAAPGAL
SNRDFAAIVGKVLGSPSWLPVPEFSLRIALGEMADLVVYGQNAVPRKALDLGYQFRFPTLEPALRDLLDLPEPVKR

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=308, Percent_Identity=35.0649350649351, Blast_Score=162, Evalue=4e-40,
Organism=Escherichia coli, GI1788642, Length=305, Percent_Identity=39.0163934426229, Blast_Score=194, Evalue=9e-51,
Organism=Drosophila melanogaster, GI28573846, Length=308, Percent_Identity=33.1168831168831, Blast_Score=163, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 34357; Mature: 34226

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKRIIITGATGLIGRRLVAELRNDYHLVIFSRDPARARSTLPGAADYVAWQPSEQGPW
CCCCEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHCCCCCCCEEEECCCCCCCE
AAAVDGAWAVVHLAGAPISTGLLGKRWTPEYKAEIRDSRVIGTRGIVNAIAAASQRPSVF
EEECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCEEECHHHHHHHHHHCCCCCCEE
VCASAVGYYGPYRDNTPLTEDSPPGRDFLAQVCVAWEAEAVRAEEYGVRTVRLRTGLVLD
EEECHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEEEC
PTSGALPQIMLPFKLMTGGPILPGTQVYPWIHPDDEVGLIRFALENDQVRGPLNAAAPGA
CCCCCCCEEEECEEEECCCCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
LSNRDFAAIVGKVLGSPSWLPVPEFSLRIALGEMADLVVYGQNAVPRKALDLGYQFRFPT
CCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHCCEEEECCC
LEPALRDLLDLPEPVKR
CCHHHHHHHCCCHHHCC
>Mature Secondary Structure 
STKRIIITGATGLIGRRLVAELRNDYHLVIFSRDPARARSTLPGAADYVAWQPSEQGPW
CCCEEEEECCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHCCCCCCCEEEECCCCCCCE
AAAVDGAWAVVHLAGAPISTGLLGKRWTPEYKAEIRDSRVIGTRGIVNAIAAASQRPSVF
EEECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCEEECHHHHHHHHHHCCCCCCEE
VCASAVGYYGPYRDNTPLTEDSPPGRDFLAQVCVAWEAEAVRAEEYGVRTVRLRTGLVLD
EEECHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEEEC
PTSGALPQIMLPFKLMTGGPILPGTQVYPWIHPDDEVGLIRFALENDQVRGPLNAAAPGA
CCCCCCCEEEECEEEECCCCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
LSNRDFAAIVGKVLGSPSWLPVPEFSLRIALGEMADLVVYGQNAVPRKALDLGYQFRFPT
CCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHCCEEEECCC
LEPALRDLLDLPEPVKR
CCHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]