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The map label for this gene is 222525599

Identifier: 222525599

GI number: 222525599

Start: 2972316

End: 2972657

Strand: Direct

Name: 222525599

Synonym: Chy400_2349

Alternate gene names: NA

Gene position: 2972316-2972657 (Clockwise)

Preceding gene: 222525594

Following gene: 222525601

Centisome position: 56.41

GC content: 54.97

Gene sequence:

>342_bases
ATGCATGCCGTCCAGAGCGCAGACATCAAAAGTTTTGCCATCGGCTTGATGAATCTCCGCCCCTTTGCCGGTCAGCAATT
AATGGCAGTGCGGGTTGATGCGCCAAAGGGGGCCACGGCACCAGCCCACAGTCATCCCCACGAACAGATGACCCTCGTCA
TCAGTGGTCGTCTACGGTTTCGCGTAGGTGATGAATGGCGTGAACTCGGTCCGCTCGAGATTGTCCACATTCCCGGTGGG
GTCGAACACGAAGCGATTATGGAAGAAGATTCCGTCTTCTTCGATCTCTTCCATCCAATACGAGCCGATTTTCTGCAGCG
ACAGGCTGAAGCCGGATCATGA

Upstream 100 bases:

>100_bases
TCCCTTGCGTTTCCGTTCAGATAGCGATAAGATGCACTCAACAAATGCACAGTCCCGGTCATCCCCAAACGACAGCATTT
CATCACCTGAAGGAGTCGCT

Downstream 100 bases:

>100_bases
TGACGAGTTGGACATCCGCTCGTTGCTGGCCCGGCGAGCTGCGGCATATTCCTCTGCTGTAATTACCTGACCGCCAACAA
TATCCTGACTCAACAGGCGG

Product: Cupin 2 barrel domain-containing protein

Products: NA

Alternate protein names: Pectin Degradation Protein KdgF; Cupin 2 Conserved Barrel Domain-Containing Protein; Degradation Protein

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MHAVQSADIKSFAIGLMNLRPFAGQQLMAVRVDAPKGATAPAHSHPHEQMTLVISGRLRFRVGDEWRELGPLEIVHIPGG
VEHEAIMEEDSVFFDLFHPIRADFLQRQAEAGS

Sequences:

>Translated_113_residues
MHAVQSADIKSFAIGLMNLRPFAGQQLMAVRVDAPKGATAPAHSHPHEQMTLVISGRLRFRVGDEWRELGPLEIVHIPGG
VEHEAIMEEDSVFFDLFHPIRADFLQRQAEAGS
>Mature_113_residues
MHAVQSADIKSFAIGLMNLRPFAGQQLMAVRVDAPKGATAPAHSHPHEQMTLVISGRLRFRVGDEWRELGPLEIVHIPGG
VEHEAIMEEDSVFFDLFHPIRADFLQRQAEAGS

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12538; Mature: 12538

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAVQSADIKSFAIGLMNLRPFAGQQLMAVRVDAPKGATAPAHSHPHEQMTLVISGRLRF
CCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECEEEE
RVGDEWRELGPLEIVHIPGGVEHEAIMEEDSVFFDLFHPIRADFLQRQAEAGS
EECCHHHHCCCEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHAVQSADIKSFAIGLMNLRPFAGQQLMAVRVDAPKGATAPAHSHPHEQMTLVISGRLRF
CCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECEEEE
RVGDEWRELGPLEIVHIPGGVEHEAIMEEDSVFFDLFHPIRADFLQRQAEAGS
EECCHHHHCCCEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA