| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525590
Identifier: 222525590
GI number: 222525590
Start: 2955947
End: 2956297
Strand: Direct
Name: 222525590
Synonym: Chy400_2340
Alternate gene names: NA
Gene position: 2955947-2956297 (Clockwise)
Preceding gene: 222525589
Following gene: 222525591
Centisome position: 56.1
GC content: 57.55
Gene sequence:
>351_bases ATGCAGATCGCCTTTCCGTACACGATTGACGGCAGCGGGCGTACTGCCCAGGCCGGTGATGATGACCATATTCGCCATTT GATTGAACAACTCCTCTTCACCGCTCCCGGCGAACGAGTCAATCGACCGGGCTTTGGTGCCGGTTTGCACCGCTTGATCT TCGCACCGAACAGCACCGAACTGGCGACGGCACTGGAGTTTATGGTACAGGGAGCGTTGCAAGAGTATCTGGGTGAATTG ATCCGGGTCGAGACGGTGGCCATAGCGGCTGAAGACGAGCGATTGCGGGTGACGGTGCAGTATGTCGTGCAACGCACCCA GCAGCGCCGTGTGGTTGAGATTGCGAGTTAA
Upstream 100 bases:
>100_bases GTGGTGTACCGGTCCTGTTGCAAGACAGTCAGGCCACGTGCGTCCCTAATGGCACACCGGTCAATATTGTGATGACGCAG ATGCGGGTGAGGGGGAACTG
Downstream 100 bases:
>100_bases GTATGGGCATACAGTTTCGCTGTGCGAATGTGCGCCGGGCACAAGTGCTGGGCACGAGCGCGATACCGCTGAACGGAATT GATTTTCTGGAAGTGCTCGA
Product: GPW/gp25 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MQIAFPYTIDGSGRTAQAGDDDHIRHLIEQLLFTAPGERVNRPGFGAGLHRLIFAPNSTELATALEFMVQGALQEYLGEL IRVETVAIAAEDERLRVTVQYVVQRTQQRRVVEIAS
Sequences:
>Translated_116_residues MQIAFPYTIDGSGRTAQAGDDDHIRHLIEQLLFTAPGERVNRPGFGAGLHRLIFAPNSTELATALEFMVQGALQEYLGEL IRVETVAIAAEDERLRVTVQYVVQRTQQRRVVEIAS >Mature_116_residues MQIAFPYTIDGSGRTAQAGDDDHIRHLIEQLLFTAPGERVNRPGFGAGLHRLIFAPNSTELATALEFMVQGALQEYLGEL IRVETVAIAAEDERLRVTVQYVVQRTQQRRVVEIAS
Specific function: Unknown
COG id: COG3628
COG function: function code R; Phage baseplate assembly protein W
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12921; Mature: 12921
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIAFPYTIDGSGRTAQAGDDDHIRHLIEQLLFTAPGERVNRPGFGAGLHRLIFAPNSTE CEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEECCCCHH LATALEFMVQGALQEYLGELIRVETVAIAAEDERLRVTVQYVVQRTQQRRVVEIAS HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MQIAFPYTIDGSGRTAQAGDDDHIRHLIEQLLFTAPGERVNRPGFGAGLHRLIFAPNSTE CEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEECCCCHH LATALEFMVQGALQEYLGELIRVETVAIAAEDERLRVTVQYVVQRTQQRRVVEIAS HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA