| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525575
Identifier: 222525575
GI number: 222525575
Start: 2937243
End: 2937890
Strand: Reverse
Name: 222525575
Synonym: Chy400_2324
Alternate gene names: NA
Gene position: 2937890-2937243 (Counterclockwise)
Preceding gene: 222525595
Following gene: 222525574
Centisome position: 55.76
GC content: 62.19
Gene sequence:
>648_bases ATGCCTCGTCGACACGCTGTGCGACCGGTGAATCTGCCGGCTTCCGAGCCGACAACCACTAATGGGCATCCTCAATCACA TCCTGACGATGATCCGATGTCCGTCCTGCGCTATGAGCCGCTGCCCGATCTCGATCCAGAGCAGGCTCGTCAGTTGCTAT CGGCGCCGACCACACCGGTTGTTGCTGACACGAAGAAGTTGCCTGCCCGTCTCCGCCCCAAGACCACAAAGCACAAGGGG ATTACGCGCATTGACCACCCGGCCAAGCGCACGTTCGGCTATTTTGTGCGCGTCACCTGGAATAAGCAGCGCCGCAGCAA GTTCTTCTCCGACTCGGTGTACGGTGACAGACTGGCCGCACTCGCCGCAGCTATCGAGTGGCGAAACGCAACCGAACGCG AGCTAGGCAAGCCGCGGACCGAGCGTCAGGTCATCGGTGTTGCCCGCACCAGCACCGGTATTGTCGGTGTACGGCGCACG ATCAAAGATGGGCGTGAGGTTTACGAAGCGACCTGGCGTGATGGCAATCGTATTCGCCGCACCTCTTACTCGATTGCCAA GCACGGTGAGCGCCGCGCCCTCGCCCTGGCCCGCCGCGCTCGCGAAAAGTACGAGCGGCAACGCCAGCGCACCCCGGCAG CCGATTAG
Upstream 100 bases:
>100_bases TTGGCGGGCAAAATATGGTAATATAGAAAGCAGAGGTTTCAACCTTCGATATAATCACTATGGTACAGGCTATCTGAGGT TTCAAAAGGAGCAATCAGCA
Downstream 100 bases:
>100_bases CACCCTCCAGGTCTTTGTTGATTGCTTCCCCCCTGCATCGTGGTATGCAGGGGGATTTGTACATGTTGCACAATGCCTGA TCACAGGCTGTCTGTCACAC
Product: Pathogenesis-related transcriptional factor and ERF protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MPRRHAVRPVNLPASEPTTTNGHPQSHPDDDPMSVLRYEPLPDLDPEQARQLLSAPTTPVVADTKKLPARLRPKTTKHKG ITRIDHPAKRTFGYFVRVTWNKQRRSKFFSDSVYGDRLAALAAAIEWRNATERELGKPRTERQVIGVARTSTGIVGVRRT IKDGREVYEATWRDGNRIRRTSYSIAKHGERRALALARRAREKYERQRQRTPAAD
Sequences:
>Translated_215_residues MPRRHAVRPVNLPASEPTTTNGHPQSHPDDDPMSVLRYEPLPDLDPEQARQLLSAPTTPVVADTKKLPARLRPKTTKHKG ITRIDHPAKRTFGYFVRVTWNKQRRSKFFSDSVYGDRLAALAAAIEWRNATERELGKPRTERQVIGVARTSTGIVGVRRT IKDGREVYEATWRDGNRIRRTSYSIAKHGERRALALARRAREKYERQRQRTPAAD >Mature_214_residues PRRHAVRPVNLPASEPTTTNGHPQSHPDDDPMSVLRYEPLPDLDPEQARQLLSAPTTPVVADTKKLPARLRPKTTKHKGI TRIDHPAKRTFGYFVRVTWNKQRRSKFFSDSVYGDRLAALAAAIEWRNATERELGKPRTERQVIGVARTSTGIVGVRRTI KDGREVYEATWRDGNRIRRTSYSIAKHGERRALALARRAREKYERQRQRTPAAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24619; Mature: 24488
Theoretical pI: Translated: 11.61; Mature: 11.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRHAVRPVNLPASEPTTTNGHPQSHPDDDPMSVLRYEPLPDLDPEQARQLLSAPTTPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCCHHHHHHHHHCCCCCE VADTKKLPARLRPKTTKHKGITRIDHPAKRTFGYFVRVTWNKQRRSKFFSDSVYGDRLAA EECCHHCCHHCCCCCCCCCCCCCCCCHHHHCCEEEEEEEECHHHHHHHHHHHHHHHHHHH LAAAIEWRNATERELGKPRTERQVIGVARTSTGIVGVRRTIKDGREVYEATWRDGNRIRR HHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH TSYSIAKHGERRALALARRAREKYERQRQRTPAAD HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PRRHAVRPVNLPASEPTTTNGHPQSHPDDDPMSVLRYEPLPDLDPEQARQLLSAPTTPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCCHHHHHHHHHCCCCCE VADTKKLPARLRPKTTKHKGITRIDHPAKRTFGYFVRVTWNKQRRSKFFSDSVYGDRLAA EECCHHCCHHCCCCCCCCCCCCCCCCHHHHCCEEEEEEEECHHHHHHHHHHHHHHHHHHH LAAAIEWRNATERELGKPRTERQVIGVARTSTGIVGVRRTIKDGREVYEATWRDGNRIRR HHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH TSYSIAKHGERRALALARRAREKYERQRQRTPAAD HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA