Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is yfcE [C]

Identifier: 222525571

GI number: 222525571

Start: 2933032

End: 2933529

Strand: Direct

Name: yfcE [C]

Synonym: Chy400_2320

Alternate gene names: 222525571

Gene position: 2933032-2933529 (Clockwise)

Preceding gene: 222525570

Following gene: 222525572

Centisome position: 55.67

GC content: 55.22

Gene sequence:

>498_bases
ATGGAGATAGGGGTTATTTCTGATACTCACGGTTTTCTGGCACCATCAGCTTTACAGGTGTTGTCCGGGGTTCAGTTGAT
TGTACACGCCGGCGATATTGGGAATGAAGCGGTGCTGGGGCAGCTTGAGACAGTGGCGCCGGTGATTGCTATTCACGGTA
ATACTGATAGTGGAACGGAACTGGCCCGGACGTATCCGGCGAGTCGCTGGATCGAGCGTGAGGGTGTGTTGATCTATCTG
ACCCATATCGGTGGCAAGCCGAACCATCTTGTGCAATCGTTACCAAAGACTGCTGATGGGCGATCTCCACATGTCTACAT
TTTTGGTCATAGCCATCGGCCATTGTGCGAAGTACACAATTCCGTTCTGTTTCTGAATCCGGGGACAGCCGGTGCGCCAC
GGGGTGCGGGTCTGTCGGTCGCCCGGCTGACGGTGCATGATGGTACGGCGCAGGCGGTGCTCATTCCGTTGACGGATAGT
CCGCGGGCAATACGTTGA

Upstream 100 bases:

>100_bases
GCAGGTACCTGATACCGACGTGTTGGAGCCTGAGCCGGCTTTTCAACGGATTGAGGCAGGGATCGCAGCATTGCAGAAGG
AGTTGAGCGGGAGTTGAATA

Downstream 100 bases:

>100_bases
TGAGCAGGTACTGCGTGGATCACTGAACAGCCAGAGGTCAGGATAGTGACCGGTGCGACACGTGGCGGGTGTTGAGCGGC
GTGGAGGTGGGAGAGGGCTG

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MEIGVISDTHGFLAPSALQVLSGVQLIVHAGDIGNEAVLGQLETVAPVIAIHGNTDSGTELARTYPASRWIEREGVLIYL
THIGGKPNHLVQSLPKTADGRSPHVYIFGHSHRPLCEVHNSVLFLNPGTAGAPRGAGLSVARLTVHDGTAQAVLIPLTDS
PRAIR

Sequences:

>Translated_165_residues
MEIGVISDTHGFLAPSALQVLSGVQLIVHAGDIGNEAVLGQLETVAPVIAIHGNTDSGTELARTYPASRWIEREGVLIYL
THIGGKPNHLVQSLPKTADGRSPHVYIFGHSHRPLCEVHNSVLFLNPGTAGAPRGAGLSVARLTVHDGTAQAVLIPLTDS
PRAIR
>Mature_165_residues
MEIGVISDTHGFLAPSALQVLSGVQLIVHAGDIGNEAVLGQLETVAPVIAIHGNTDSGTELARTYPASRWIEREGVLIYL
THIGGKPNHLVQSLPKTADGRSPHVYIFGHSHRPLCEVHNSVLFLNPGTAGAPRGAGLSVARLTVHDGTAQAVLIPLTDS
PRAIR

Specific function: Unknown

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR020935
- InterPro:   IPR000979 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 17393; Mature: 17393

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIGVISDTHGFLAPSALQVLSGVQLIVHAGDIGNEAVLGQLETVAPVIAIHGNTDSGTE
CCEEEECCCCCCCCHHHHHHHCCEEEEEEECCCCCHHHHCCHHHCCEEEEEECCCCCCCH
LARTYPASRWIEREGVLIYLTHIGGKPNHLVQSLPKTADGRSPHVYIFGHSHRPLCEVHN
HHHHCCCHHEECCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHCC
SVLFLNPGTAGAPRGAGLSVARLTVHDGTAQAVLIPLTDSPRAIR
CEEEECCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MEIGVISDTHGFLAPSALQVLSGVQLIVHAGDIGNEAVLGQLETVAPVIAIHGNTDSGTE
CCEEEECCCCCCCCHHHHHHHCCEEEEEEECCCCCHHHHCCHHHCCEEEEEECCCCCCCH
LARTYPASRWIEREGVLIYLTHIGGKPNHLVQSLPKTADGRSPHVYIFGHSHRPLCEVHN
HHHHCCCHHEECCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHCC
SVLFLNPGTAGAPRGAGLSVARLTVHDGTAQAVLIPLTDSPRAIR
CEEEECCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]