| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yfcE [C]
Identifier: 222525571
GI number: 222525571
Start: 2933032
End: 2933529
Strand: Direct
Name: yfcE [C]
Synonym: Chy400_2320
Alternate gene names: 222525571
Gene position: 2933032-2933529 (Clockwise)
Preceding gene: 222525570
Following gene: 222525572
Centisome position: 55.67
GC content: 55.22
Gene sequence:
>498_bases ATGGAGATAGGGGTTATTTCTGATACTCACGGTTTTCTGGCACCATCAGCTTTACAGGTGTTGTCCGGGGTTCAGTTGAT TGTACACGCCGGCGATATTGGGAATGAAGCGGTGCTGGGGCAGCTTGAGACAGTGGCGCCGGTGATTGCTATTCACGGTA ATACTGATAGTGGAACGGAACTGGCCCGGACGTATCCGGCGAGTCGCTGGATCGAGCGTGAGGGTGTGTTGATCTATCTG ACCCATATCGGTGGCAAGCCGAACCATCTTGTGCAATCGTTACCAAAGACTGCTGATGGGCGATCTCCACATGTCTACAT TTTTGGTCATAGCCATCGGCCATTGTGCGAAGTACACAATTCCGTTCTGTTTCTGAATCCGGGGACAGCCGGTGCGCCAC GGGGTGCGGGTCTGTCGGTCGCCCGGCTGACGGTGCATGATGGTACGGCGCAGGCGGTGCTCATTCCGTTGACGGATAGT CCGCGGGCAATACGTTGA
Upstream 100 bases:
>100_bases GCAGGTACCTGATACCGACGTGTTGGAGCCTGAGCCGGCTTTTCAACGGATTGAGGCAGGGATCGCAGCATTGCAGAAGG AGTTGAGCGGGAGTTGAATA
Downstream 100 bases:
>100_bases TGAGCAGGTACTGCGTGGATCACTGAACAGCCAGAGGTCAGGATAGTGACCGGTGCGACACGTGGCGGGTGTTGAGCGGC GTGGAGGTGGGAGAGGGCTG
Product: phosphodiesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MEIGVISDTHGFLAPSALQVLSGVQLIVHAGDIGNEAVLGQLETVAPVIAIHGNTDSGTELARTYPASRWIEREGVLIYL THIGGKPNHLVQSLPKTADGRSPHVYIFGHSHRPLCEVHNSVLFLNPGTAGAPRGAGLSVARLTVHDGTAQAVLIPLTDS PRAIR
Sequences:
>Translated_165_residues MEIGVISDTHGFLAPSALQVLSGVQLIVHAGDIGNEAVLGQLETVAPVIAIHGNTDSGTELARTYPASRWIEREGVLIYL THIGGKPNHLVQSLPKTADGRSPHVYIFGHSHRPLCEVHNSVLFLNPGTAGAPRGAGLSVARLTVHDGTAQAVLIPLTDS PRAIR >Mature_165_residues MEIGVISDTHGFLAPSALQVLSGVQLIVHAGDIGNEAVLGQLETVAPVIAIHGNTDSGTELARTYPASRWIEREGVLIYL THIGGKPNHLVQSLPKTADGRSPHVYIFGHSHRPLCEVHNSVLFLNPGTAGAPRGAGLSVARLTVHDGTAQAVLIPLTDS PRAIR
Specific function: Unknown
COG id: COG0622
COG function: function code R; Predicted phosphoesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR020935 - InterPro: IPR000979 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 17393; Mature: 17393
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIGVISDTHGFLAPSALQVLSGVQLIVHAGDIGNEAVLGQLETVAPVIAIHGNTDSGTE CCEEEECCCCCCCCHHHHHHHCCEEEEEEECCCCCHHHHCCHHHCCEEEEEECCCCCCCH LARTYPASRWIEREGVLIYLTHIGGKPNHLVQSLPKTADGRSPHVYIFGHSHRPLCEVHN HHHHCCCHHEECCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHCC SVLFLNPGTAGAPRGAGLSVARLTVHDGTAQAVLIPLTDSPRAIR CEEEECCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCC >Mature Secondary Structure MEIGVISDTHGFLAPSALQVLSGVQLIVHAGDIGNEAVLGQLETVAPVIAIHGNTDSGTE CCEEEECCCCCCCCHHHHHHHCCEEEEEEECCCCCHHHHCCHHHCCEEEEEECCCCCCCH LARTYPASRWIEREGVLIYLTHIGGKPNHLVQSLPKTADGRSPHVYIFGHSHRPLCEVHN HHHHCCCHHEECCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHCC SVLFLNPGTAGAPRGAGLSVARLTVHDGTAQAVLIPLTDSPRAIR CEEEECCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]