| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222525566
Identifier: 222525566
GI number: 222525566
Start: 2927724
End: 2928887
Strand: Reverse
Name: 222525566
Synonym: Chy400_2315
Alternate gene names: NA
Gene position: 2928887-2927724 (Counterclockwise)
Preceding gene: 222525573
Following gene: 222525563
Centisome position: 55.59
GC content: 73.63
Gene sequence:
>1164_bases GTGGGGGCGAGTCTGTACGCCCTGCGAGCGTGCGCCTCCGGCGCGCTAACCGCTTGGCATCCCGACTGGGAGCGCGCGCC TCCGGCGCACTCCTCACCGGCAACAACCCGCAGTGCCCGCCATCAACGGCGTATCACCCCCCTGAACCCACTCACGCCAG CGGTCACCATCTGGCACCGGCAGTTCCCGCCCCCAGCGGGGGCGGGCCAGGGTGGGGGCAAGTCTGCACGCCCTGCGAGC GCGCGCCTCCGGCACGCTCCTCACCGGCACCAGCCTGTGCCAGCGGTCACCATCCGGCACTGGCAGTTCCCGCCCCCAGC GGGGGCGGGCCAGGGTGGGGGCGAGTCTGTACGCCCTGCGAGCGTGCGCCTCCGGCGCGCTCATCGCAACTGGGAGCGCG CGCCTCCGGCGCGCTTACCTCGTGTACCCTACACACTACTGACCCTCCCTGAACCGTCTACACCCGCCCCCAGCGGGGGC GGGCTGGGGTGGGGGCGATGCCCTGCAAGCGTGCGCCTCCGGCGCGCTCACCGCCTGGCATCCCGACTGAGCGCACGCGC CTCCAGCGCGCTCGCCAGCCCGCGCCGTGCCCGCCACCAACGGTGTATCACCCCCCTGAACCCACTCGCGCCAGCGGTCA CCATCCGGCACTGGCAGTTCCCGCCCCCAGCGGGGGCGGGCCAGGGTGGGGGCGAGTCTGTACGCCCTGCGAGCGTGCGC CTCCGGCGCGCTCACCGCCTGGCATCCCGACTGAGCGCACGCGCCTCCAGCGCGCTCGCCAGCCCGCGCCGTGCCCGCCA CCAACGGTGTATCACCCCCCTGAACCCACTCACGCCAGTGGTCACCATCCGGCCACCGCGGGTTCCCCGCCCCCAGCGAG GGCGGGTAAAGGTAGGAGCGATGCCCTGCGAGCGTGCGCCTCCGGCGCGCTCATCGCCTGACATCCCGACTGGGAGCGCG CGCCTCCGGCGCGCTCCTCACCGGCACCAGCTTACACCAGCGGGAGCCACATCCGGCACCGCTGGTTCCCGCCCCCAGCA AGGGCGGGCTAGGGTAGGGGCGATGCCCTGCAAGCGTGCGCCTCCGGCGCGCTCATCGCAACTGGGAGCGCGCGCCTCCG GCGCGCTTACCTCGTGTACCCTACACACTACTGACCCTCCCTGA
Upstream 100 bases:
>100_bases CGTACCCGCCATCAACGGCGTATCGCACCCCTGAACCCACTCGCGCCAGCGATCACCATCCGGCACCGGCAGTTCCCGCC CCCAGCGGGGGCGGGCTAGG
Downstream 100 bases:
>100_bases ACCGTCTACACCCGCCCCCAGCGGGGGCGGGCTGGGGTGGGGGCGATGCCCTGCAAGCGTGCGCCTCCGGCGCGCTCATC GCTTGGCATCCCGACTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MGASLYALRACASGALTAWHPDWERAPPAHSSPATTRSARHQRRITPLNPLTPAVTIWHRQFPPPAGAGQGGGKSARPAS ARLRHAPHRHQPVPAVTIRHWQFPPPAGAGQGGGESVRPASVRLRRAHRNWERAPPARLPRVPYTLLTLPEPSTPAPSGG GLGWGRCPASVRLRRAHRLASRLSARASSALASPRRARHQRCITPLNPLAPAVTIRHWQFPPPAGAGQGGGESVRPASVR LRRAHRLASRLSARASSALASPRRARHQRCITPLNPLTPVVTIRPPRVPRPQRGRVKVGAMPCERAPPARSSPDIPTGSA RLRRAPHRHQLTPAGATSGTAGSRPQQGRARVGAMPCKRAPPARSSQLGARASGALTSCTLHTTDPP
Sequences:
>Translated_387_residues MGASLYALRACASGALTAWHPDWERAPPAHSSPATTRSARHQRRITPLNPLTPAVTIWHRQFPPPAGAGQGGGKSARPAS ARLRHAPHRHQPVPAVTIRHWQFPPPAGAGQGGGESVRPASVRLRRAHRNWERAPPARLPRVPYTLLTLPEPSTPAPSGG GLGWGRCPASVRLRRAHRLASRLSARASSALASPRRARHQRCITPLNPLAPAVTIRHWQFPPPAGAGQGGGESVRPASVR LRRAHRLASRLSARASSALASPRRARHQRCITPLNPLTPVVTIRPPRVPRPQRGRVKVGAMPCERAPPARSSPDIPTGSA RLRRAPHRHQLTPAGATSGTAGSRPQQGRARVGAMPCKRAPPARSSQLGARASGALTSCTLHTTDPP >Mature_386_residues GASLYALRACASGALTAWHPDWERAPPAHSSPATTRSARHQRRITPLNPLTPAVTIWHRQFPPPAGAGQGGGKSARPASA RLRHAPHRHQPVPAVTIRHWQFPPPAGAGQGGGESVRPASVRLRRAHRNWERAPPARLPRVPYTLLTLPEPSTPAPSGGG LGWGRCPASVRLRRAHRLASRLSARASSALASPRRARHQRCITPLNPLAPAVTIRHWQFPPPAGAGQGGGESVRPASVRL RRAHRLASRLSARASSALASPRRARHQRCITPLNPLTPVVTIRPPRVPRPQRGRVKVGAMPCERAPPARSSPDIPTGSAR LRRAPHRHQLTPAGATSGTAGSRPQQGRARVGAMPCKRAPPARSSQLGARASGALTSCTLHTTDPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41292; Mature: 41161
Theoretical pI: Translated: 12.84; Mature: 12.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGASLYALRACASGALTAWHPDWERAPPAHSSPATTRSARHQRRITPLNPLTPAVTIWHR CCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEHHH QFPPPAGAGQGGGKSARPASARLRHAPHRHQPVPAVTIRHWQFPPPAGAGQGGGESVRPA CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH SVRLRRAHRNWERAPPARLPRVPYTLLTLPEPSTPAPSGGGLGWGRCPASVRLRRAHRLA HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH SRLSARASSALASPRRARHQRCITPLNPLAPAVTIRHWQFPPPAGAGQGGGESVRPASVR HHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHH LRRAHRLASRLSARASSALASPRRARHQRCITPLNPLTPVVTIRPPRVPRPQRGRVKVGA HHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEECC MPCERAPPARSSPDIPTGSARLRRAPHRHQLTPAGATSGTAGSRPQQGRARVGAMPCKRA CCCCCCCCCCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC PPARSSQLGARASGALTSCTLHTTDPP CCCCCHHCCCCCCCCEEEEEEECCCCC >Mature Secondary Structure GASLYALRACASGALTAWHPDWERAPPAHSSPATTRSARHQRRITPLNPLTPAVTIWHR CCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEHHH QFPPPAGAGQGGGKSARPASARLRHAPHRHQPVPAVTIRHWQFPPPAGAGQGGGESVRPA CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH SVRLRRAHRNWERAPPARLPRVPYTLLTLPEPSTPAPSGGGLGWGRCPASVRLRRAHRLA HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH SRLSARASSALASPRRARHQRCITPLNPLAPAVTIRHWQFPPPAGAGQGGGESVRPASVR HHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHH LRRAHRLASRLSARASSALASPRRARHQRCITPLNPLTPVVTIRPPRVPRPQRGRVKVGA HHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEECC MPCERAPPARSSPDIPTGSARLRRAPHRHQLTPAGATSGTAGSRPQQGRARVGAMPCKRA CCCCCCCCCCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC PPARSSQLGARASGALTSCTLHTTDPP CCCCCHHCCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA