| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525555
Identifier: 222525555
GI number: 222525555
Start: 2918429
End: 2919091
Strand: Direct
Name: 222525555
Synonym: Chy400_2304
Alternate gene names: NA
Gene position: 2918429-2919091 (Clockwise)
Preceding gene: 222525554
Following gene: 222525556
Centisome position: 55.39
GC content: 54.6
Gene sequence:
>663_bases ATGTCTGCTCAAATCTTTCCGCGTAATGCAAATGCGATCTTTTTGGCCAGTCTCTTCGGCCTGGTGCTGTTGGTGATCGG AATCATCGCGGCGATGGTCGGCTTCTACCTCTCTCCATGGTATACTGATGTAGGAGTTGCCAAAGCCCAGCCGGTTCCCT TCAGCCACAAACACCACGTTAGCGAACTGAAGATCGATTGTCGCTACTGTCACGCAACCGTCGAAAAGGCTGCCACGGCT GGTTTTCCAGCAACCGAAACCTGTATGTCGTGCCACTCGCAGGTCTGGACAACCAGTCCCTTGCTGCAGGTGGTGCGAGA CAGTTATCAGACCGGCGAGCCAGTTGTTTGGAACCGCATCTACGACCTGCCCGATTTTGTCTACTTCAACCACTCGGTAC ACGTTGCCAAGGGTATTGGTTGTAGCTCGTGCCACGGCCGAATCGATCAACAACAGTTGGCCGCCAAAGCCCAACCGCTG TATATGGGCTGGTGTCTTGGGTGTCACCGGGCACCGGAAGACTACATTCGCCCCCGCGAAGAGGTCTTCAATATGGAGTG GGATGTGAATGCGCTGTCACTGGCCGAACGGCAACAACTGGTGATCGAGTATCAGATTCCTACCGATGGCCGTCTCACCA ACTGTTTCGTGTGCCATCGCTAG
Upstream 100 bases:
>100_bases GCTGCAATTAAGCCAGAATGCCGATGTTGCCCTGTTGACTGAGGCTGAGCTAGAGCAAGTAAGAGCCGGCCGCTAGGCTA GAGAGCGAGAGACGTGACGT
Downstream 100 bases:
>100_bases AGGAGATTGTCCTATGAGTCACGCTCATGCCCATAGTGAAGGTCCTTCCGCCGAGAGTCTGGCGCTCAATCATGAAGTGA GTGATGCTCGTTCACAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome C Family Protein; Cytochrome C; Cytochrome C Class I; Cytochrome C Domain-Containing Protein; Cytochrome C Mono- And Diheme Variant; Multiheme Cytochrome Domain Protein; Lipoprotein Cytochrome C
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSAQIFPRNANAIFLASLFGLVLLVIGIIAAMVGFYLSPWYTDVGVAKAQPVPFSHKHHVSELKIDCRYCHATVEKAATA GFPATETCMSCHSQVWTTSPLLQVVRDSYQTGEPVVWNRIYDLPDFVYFNHSVHVAKGIGCSSCHGRIDQQQLAAKAQPL YMGWCLGCHRAPEDYIRPREEVFNMEWDVNALSLAERQQLVIEYQIPTDGRLTNCFVCHR
Sequences:
>Translated_220_residues MSAQIFPRNANAIFLASLFGLVLLVIGIIAAMVGFYLSPWYTDVGVAKAQPVPFSHKHHVSELKIDCRYCHATVEKAATA GFPATETCMSCHSQVWTTSPLLQVVRDSYQTGEPVVWNRIYDLPDFVYFNHSVHVAKGIGCSSCHGRIDQQQLAAKAQPL YMGWCLGCHRAPEDYIRPREEVFNMEWDVNALSLAERQQLVIEYQIPTDGRLTNCFVCHR >Mature_219_residues SAQIFPRNANAIFLASLFGLVLLVIGIIAAMVGFYLSPWYTDVGVAKAQPVPFSHKHHVSELKIDCRYCHATVEKAATAG FPATETCMSCHSQVWTTSPLLQVVRDSYQTGEPVVWNRIYDLPDFVYFNHSVHVAKGIGCSSCHGRIDQQQLAAKAQPLY MGWCLGCHRAPEDYIRPREEVFNMEWDVNALSLAERQQLVIEYQIPTDGRLTNCFVCHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24778; Mature: 24646
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQIFPRNANAIFLASLFGLVLLVIGIIAAMVGFYLSPWYTDVGVAKAQPVPFSHKHHV CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH SELKIDCRYCHATVEKAATAGFPATETCMSCHSQVWTTSPLLQVVRDSYQTGEPVVWNRI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEHHHH YDLPDFVYFNHSVHVAKGIGCSSCHGRIDQQQLAAKAQPLYMGWCLGCHRAPEDYIRPRE HCCCCEEEECCEEEEECCCCCCHHCCCCCHHHHHHHCCCHHHHHHHHCCCCCHHHCCCHH EVFNMEWDVNALSLAERQQLVIEYQIPTDGRLTNCFVCHR HHHCCCCCCHHHHHHHHCEEEEEEECCCCCCEEEEEEECC >Mature Secondary Structure SAQIFPRNANAIFLASLFGLVLLVIGIIAAMVGFYLSPWYTDVGVAKAQPVPFSHKHHV CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH SELKIDCRYCHATVEKAATAGFPATETCMSCHSQVWTTSPLLQVVRDSYQTGEPVVWNRI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEHHHH YDLPDFVYFNHSVHVAKGIGCSSCHGRIDQQQLAAKAQPLYMGWCLGCHRAPEDYIRPRE HCCCCEEEECCEEEEECCCCCCHHCCCCCHHHHHHHCCCHHHHHHHHCCCCCHHHCCCHH EVFNMEWDVNALSLAERQQLVIEYQIPTDGRLTNCFVCHR HHHCCCCCCHHHHHHHHCEEEEEEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA