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The map label for this gene is glcF [H]

Identifier: 222525552

GI number: 222525552

Start: 2912843

End: 2914243

Strand: Direct

Name: glcF [H]

Synonym: Chy400_2301

Alternate gene names: 222525552

Gene position: 2912843-2914243 (Clockwise)

Preceding gene: 222525551

Following gene: 222525553

Centisome position: 55.28

GC content: 58.03

Gene sequence:

>1401_bases
GTGACTGTTACCCAATCTTCGCCATCATCGGTGCAGCCGACAGTTCCACTCATCGGCTTTAGCGCCAAAGATAAACCCAG
TTCCGACATCATTAATACCTGCGTCCACTGCGGTTTGTGTCTATCGTCGTGTCCTACGTACCGCGAAACCGGGCTGGAAA
TGGCTTCGCCACGTGGTCGTATTTACCTGATGAAAGCTGTTGATGAAGGGCGCATCAGCCTCGCCAGTGAAGTGTTTCAA
GAGCAGATGAGCCTCTGTCTGAATTGCCGGGCGTGCGAGGCAGTCTGCCCGTCGGGGGTGCAGTACGGCGCGATTCTCGA
GGCCAGCCGGGCGCAGATCGAGCAGGCGCGAGCCGGCAAAGCCGGGCCGCCGGCCACACCCGGTGCACCTGAACCGAAAT
TGCCGCCGCGGCCACTCTGGCAGCGTGCCTTGCGCGGTGCCGTCTTCGGGTTACTGTTCAAGCGCATGGAGCTGTTTCGC
CTCTTCTCAACCACGATGCGTCTCTACCAGCGCAGTGGCATTCAATGGTTGGCCCGCAAGAGTGGTCTCCTCAAGCTACT
TGGTCTGGCCGATACCGAAGCAATGCTGCCCCCGATCAGTTCGCATTACAGCGTACCGAAGGGTCAGATTTTTCCCGCCG
AGGGCGAACGTCGCTACAGCGTGGCCCTGCTTACCGGCTGCATTATGAGCACCGCCTTTGCCCACGTGCACGAAGCGACG
ATTCGAGTATTGCGCAAGAATGGTTGTGAAGTCATTCTGCCACCCGATCAGGGATGCTGCGGTGCGTTGCATACGCACGG
TGGTGATCTCGATGGTGGACGCGAGCTGGCCCGGCGCAATATTGCCGCGTTTGAAGGGCTGGGCGTCGATGCGATTATCG
TCAACGCTGCCGGTTGTGGTAGCACCCTCAAAGAATATGGGCATCTCTTGCACGACGATCCAGCATGGCGTGAACGTGCT
GAACGGTTTAGCGCCAAAGTAAAGGACGTTCACGAATTTCTCGCCGGTATCGACTTCAATCGCAGCGCCTTGGGTCGACT
CAACCTCACCGTCACCTACCAGGAGCCGTGCCACCTGGTGCATGCCCAACGAATCAGTGCGCAGCCACGAGTGTTGCTCA
CGGCAATCCCCGGTTTGACCTTGAAAGAGATGCCGGAGTCGTCATTGTGTTGTGGCAGTGCCGGTATCTACAATGTCACC
CAGCCCGAAATGGCAATGAGCCTGGGTGCGCGCAAAATCGACAACGCGCTCACGACCGGTGCCGAGATTATTGCCACCGC
CAATCCCGGTTGTGCTCTCCAACTGGCCGGTGAACTGCGCCGTCGGGGTAAAGATGTTCAGGTGCGATATATTATCGAAT
TGCTTGATGAGTCGTATCGAGTCTTTGCAGCCTCGGCCTGA

Upstream 100 bases:

>100_bases
ATGCAGGCGCTCAAGGTAGCGATTGATCCGCACAACCACATGAATCCAGCGGCATTCTGGTTTAGCGATACTCGTGTATA
AGCCAAGAGGAGAATCACCT

Downstream 100 bases:

>100_bases
CAACAGCTATCAGTGATTTCTCACAACCCTGTGCAGTCATTGCAATGATAGATGACCTGCACAGGGCTTGTTCATGTTGC
GCATTTTCCGCAAAGTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MTVTQSSPSSVQPTVPLIGFSAKDKPSSDIINTCVHCGLCLSSCPTYRETGLEMASPRGRIYLMKAVDEGRISLASEVFQ
EQMSLCLNCRACEAVCPSGVQYGAILEASRAQIEQARAGKAGPPATPGAPEPKLPPRPLWQRALRGAVFGLLFKRMELFR
LFSTTMRLYQRSGIQWLARKSGLLKLLGLADTEAMLPPISSHYSVPKGQIFPAEGERRYSVALLTGCIMSTAFAHVHEAT
IRVLRKNGCEVILPPDQGCCGALHTHGGDLDGGRELARRNIAAFEGLGVDAIIVNAAGCGSTLKEYGHLLHDDPAWRERA
ERFSAKVKDVHEFLAGIDFNRSALGRLNLTVTYQEPCHLVHAQRISAQPRVLLTAIPGLTLKEMPESSLCCGSAGIYNVT
QPEMAMSLGARKIDNALTTGAEIIATANPGCALQLAGELRRRGKDVQVRYIIELLDESYRVFAASA

Sequences:

>Translated_466_residues
MTVTQSSPSSVQPTVPLIGFSAKDKPSSDIINTCVHCGLCLSSCPTYRETGLEMASPRGRIYLMKAVDEGRISLASEVFQ
EQMSLCLNCRACEAVCPSGVQYGAILEASRAQIEQARAGKAGPPATPGAPEPKLPPRPLWQRALRGAVFGLLFKRMELFR
LFSTTMRLYQRSGIQWLARKSGLLKLLGLADTEAMLPPISSHYSVPKGQIFPAEGERRYSVALLTGCIMSTAFAHVHEAT
IRVLRKNGCEVILPPDQGCCGALHTHGGDLDGGRELARRNIAAFEGLGVDAIIVNAAGCGSTLKEYGHLLHDDPAWRERA
ERFSAKVKDVHEFLAGIDFNRSALGRLNLTVTYQEPCHLVHAQRISAQPRVLLTAIPGLTLKEMPESSLCCGSAGIYNVT
QPEMAMSLGARKIDNALTTGAEIIATANPGCALQLAGELRRRGKDVQVRYIIELLDESYRVFAASA
>Mature_465_residues
TVTQSSPSSVQPTVPLIGFSAKDKPSSDIINTCVHCGLCLSSCPTYRETGLEMASPRGRIYLMKAVDEGRISLASEVFQE
QMSLCLNCRACEAVCPSGVQYGAILEASRAQIEQARAGKAGPPATPGAPEPKLPPRPLWQRALRGAVFGLLFKRMELFRL
FSTTMRLYQRSGIQWLARKSGLLKLLGLADTEAMLPPISSHYSVPKGQIFPAEGERRYSVALLTGCIMSTAFAHVHEATI
RVLRKNGCEVILPPDQGCCGALHTHGGDLDGGRELARRNIAAFEGLGVDAIIVNAAGCGSTLKEYGHLLHDDPAWRERAE
RFSAKVKDVHEFLAGIDFNRSALGRLNLTVTYQEPCHLVHAQRISAQPRVLLTAIPGLTLKEMPESSLCCGSAGIYNVTQ
PEMAMSLGARKIDNALTTGAEIIATANPGCALQLAGELRRRGKDVQVRYIIELLDESYRVFAASA

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI48994913, Length=443, Percent_Identity=33.4085778781038, Blast_Score=204, Evalue=1e-53,
Organism=Escherichia coli, GI1786497, Length=240, Percent_Identity=28.75, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR012257 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 50443; Mature: 50312

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTQSSPSSVQPTVPLIGFSAKDKPSSDIINTCVHCGLCLSSCPTYRETGLEMASPRGR
CCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC
IYLMKAVDEGRISLASEVFQEQMSLCLNCRACEAVCPSGVQYGAILEASRAQIEQARAGK
EEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
AGPPATPGAPEPKLPPRPLWQRALRGAVFGLLFKRMELFRLFSTTMRLYQRSGIQWLARK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SGLLKLLGLADTEAMLPPISSHYSVPKGQIFPAEGERRYSVALLTGCIMSTAFAHVHEAT
CCCEEECCCCCCHHHCCCCHHCCCCCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHHHHH
IRVLRKNGCEVILPPDQGCCGALHTHGGDLDGGRELARRNIAAFEGLGVDAIIVNAAGCG
HHHHHHCCCEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCC
STLKEYGHLLHDDPAWRERAERFSAKVKDVHEFLAGIDFNRSALGRLNLTVTYQEPCHLV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHH
HAQRISAQPRVLLTAIPGLTLKEMPESSLCCGSAGIYNVTQPEMAMSLGARKIDNALTTG
HHHHCCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
AEIIATANPGCALQLAGELRRRGKDVQVRYIIELLDESYRVFAASA
CEEEEECCCCCEEHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure 
TVTQSSPSSVQPTVPLIGFSAKDKPSSDIINTCVHCGLCLSSCPTYRETGLEMASPRGR
CCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC
IYLMKAVDEGRISLASEVFQEQMSLCLNCRACEAVCPSGVQYGAILEASRAQIEQARAGK
EEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
AGPPATPGAPEPKLPPRPLWQRALRGAVFGLLFKRMELFRLFSTTMRLYQRSGIQWLARK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SGLLKLLGLADTEAMLPPISSHYSVPKGQIFPAEGERRYSVALLTGCIMSTAFAHVHEAT
CCCEEECCCCCCHHHCCCCHHCCCCCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHHHHH
IRVLRKNGCEVILPPDQGCCGALHTHGGDLDGGRELARRNIAAFEGLGVDAIIVNAAGCG
HHHHHHCCCEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCC
STLKEYGHLLHDDPAWRERAERFSAKVKDVHEFLAGIDFNRSALGRLNLTVTYQEPCHLV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHH
HAQRISAQPRVLLTAIPGLTLKEMPESSLCCGSAGIYNVTQPEMAMSLGARKIDNALTTG
HHHHCCCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
AEIIATANPGCALQLAGELRRRGKDVQVRYIIELLDESYRVFAASA
CEEEEECCCCCEEHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]