Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is celC [H]

Identifier: 222525543

GI number: 222525543

Start: 2898624

End: 2899490

Strand: Direct

Name: celC [H]

Synonym: Chy400_2292

Alternate gene names: 222525543

Gene position: 2898624-2899490 (Clockwise)

Preceding gene: 222525542

Following gene: 222525544

Centisome position: 55.01

GC content: 55.59

Gene sequence:

>867_bases
ATGAGCAACTATCGCAATCCCCATCAGTTGATCATCACTGCCGATGATTATGGCATGTGCCCTGAAGTGAATCGAGCTAT
TGAAGAATGCCTCGCTGCCGGGGCATTGCGGGCAACTTGTGTTATGACCAATATGCCGGCATATACCGATGCTGATCGCC
TATCGAAGGATTTTCCTTCTGCTTCGATTGGAATCCACTGGACATTGACAGCAGGTACGCCGGTAGCACCGTTGTCTGAA
GTGCCTGATCTGGTTGCCCCCAATGGACAATTCTGGCCGGCGGCAGAGTTTCGGCAGCGCTGGTTGTCGCGTCGCATATC
ACCGACTCAGGTTGTCATTGAATTGCAGGCCCAGCACGCTCGATTTGTTGAACTGATCGGACAGCCTGCATTTTGGAATA
CTCACCAGAATGTGCATGTGTTGCCCCGCCTCTTCCCGCTGGTGGTTGATCTGGCCCACCGACTCGGTATTCCGGCTATG
CGCTCACACCGGCGGATTACAGCGCCTCGTCATAGTTCGACGTTGCGGTACTATCTTACCCATCCAATCTACTGGTTAAA
GGGGCAAATCATTGCGCGTTGGGCCGCTGCGGCGGAGAAGCGAGGTTTACGGATGCCGGCCGGTGTGGTGAGCACACCGG
GCTTTGGGCCGGGAAAGGTTGCTATCGATCAGATTATAGCGCGCATACCCTGGCCTCGTCGTCTCCCCGCCGAACTGGTT
ATCCACCCGGCAACGCGGGTTATTCCCGGACTCTTCGGGGGTCTAACCGAATCGCGCCTGCGCGAATTTGAAGTCTTTCG
CGATCCGACATTAGTAGAGCGATTGGCAGCAATGGGCGTACAGCCGGTTGGTTTCGAGGTGCTGTGA

Upstream 100 bases:

>100_bases
TACGACAGGCCATGGGAGCTGAGGGTCGGCGACGGGTAATTCATGAATACAACTGGCAACGTGAAGCACAATATTTGCTG
GCATTATACGCAGAGCTGTT

Downstream 100 bases:

>100_bases
TGAGATTGGTACCGCTTCCCTCTCAGCAACAACTCTACGATCATTCACCCCGCTGGTTGCAACGGATTCTGGTGAATGCG
GAAGCAGTGCGTCGCGAATG

Product: YdjC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MSNYRNPHQLIITADDYGMCPEVNRAIEECLAAGALRATCVMTNMPAYTDADRLSKDFPSASIGIHWTLTAGTPVAPLSE
VPDLVAPNGQFWPAAEFRQRWLSRRISPTQVVIELQAQHARFVELIGQPAFWNTHQNVHVLPRLFPLVVDLAHRLGIPAM
RSHRRITAPRHSSTLRYYLTHPIYWLKGQIIARWAAAAEKRGLRMPAGVVSTPGFGPGKVAIDQIIARIPWPRRLPAELV
IHPATRVIPGLFGGLTESRLREFEVFRDPTLVERLAAMGVQPVGFEVL

Sequences:

>Translated_288_residues
MSNYRNPHQLIITADDYGMCPEVNRAIEECLAAGALRATCVMTNMPAYTDADRLSKDFPSASIGIHWTLTAGTPVAPLSE
VPDLVAPNGQFWPAAEFRQRWLSRRISPTQVVIELQAQHARFVELIGQPAFWNTHQNVHVLPRLFPLVVDLAHRLGIPAM
RSHRRITAPRHSSTLRYYLTHPIYWLKGQIIARWAAAAEKRGLRMPAGVVSTPGFGPGKVAIDQIIARIPWPRRLPAELV
IHPATRVIPGLFGGLTESRLREFEVFRDPTLVERLAAMGVQPVGFEVL
>Mature_287_residues
SNYRNPHQLIITADDYGMCPEVNRAIEECLAAGALRATCVMTNMPAYTDADRLSKDFPSASIGIHWTLTAGTPVAPLSEV
PDLVAPNGQFWPAAEFRQRWLSRRISPTQVVIELQAQHARFVELIGQPAFWNTHQNVHVLPRLFPLVVDLAHRLGIPAMR
SHRRITAPRHSSTLRYYLTHPIYWLKGQIIARWAAAAEKRGLRMPAGVVSTPGFGPGKVAIDQIIARIPWPRRLPAELVI
HPATRVIPGLFGGLTESRLREFEVFRDPTLVERLAAMGVQPVGFEVL

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family [H]

Homologues:

Organism=Homo sapiens, GI63054868, Length=301, Percent_Identity=29.9003322259136, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI1788028, Length=158, Percent_Identity=32.2784810126582, Blast_Score=85, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948 [H]

Pfam domain/function: PF04794 YdjC [H]

EC number: NA

Molecular weight: Translated: 32176; Mature: 32045

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNYRNPHQLIITADDYGMCPEVNRAIEECLAAGALRATCVMTNMPAYTDADRLSKDFPS
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHEEECCCCCCCHHHHHHCCCC
ASIGIHWTLTAGTPVAPLSEVPDLVAPNGQFWPAAEFRQRWLSRRISPTQVVIELQAQHA
CCEEEEEEEECCCCCCCHHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCHHEEEEEHHHHH
RFVELIGQPAFWNTHQNVHVLPRLFPLVVDLAHRLGIPAMRSHRRITAPRHSSTLRYYLT
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEC
HPIYWLKGQIIARWAAAAEKRGLRMPAGVVSTPGFGPGKVAIDQIIARIPWPRRLPAELV
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHE
IHPATRVIPGLFGGLTESRLREFEVFRDPTLVERLAAMGVQPVGFEVL
ECCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEC
>Mature Secondary Structure 
SNYRNPHQLIITADDYGMCPEVNRAIEECLAAGALRATCVMTNMPAYTDADRLSKDFPS
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHEEECCCCCCCHHHHHHCCCC
ASIGIHWTLTAGTPVAPLSEVPDLVAPNGQFWPAAEFRQRWLSRRISPTQVVIELQAQHA
CCEEEEEEEECCCCCCCHHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCHHEEEEEHHHHH
RFVELIGQPAFWNTHQNVHVLPRLFPLVVDLAHRLGIPAMRSHRRITAPRHSSTLRYYLT
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEC
HPIYWLKGQIIARWAAAAEKRGLRMPAGVVSTPGFGPGKVAIDQIIARIPWPRRLPAELV
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHE
IHPATRVIPGLFGGLTESRLREFEVFRDPTLVERLAAMGVQPVGFEVL
ECCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8407820 [H]