| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is celC [H]
Identifier: 222525543
GI number: 222525543
Start: 2898624
End: 2899490
Strand: Direct
Name: celC [H]
Synonym: Chy400_2292
Alternate gene names: 222525543
Gene position: 2898624-2899490 (Clockwise)
Preceding gene: 222525542
Following gene: 222525544
Centisome position: 55.01
GC content: 55.59
Gene sequence:
>867_bases ATGAGCAACTATCGCAATCCCCATCAGTTGATCATCACTGCCGATGATTATGGCATGTGCCCTGAAGTGAATCGAGCTAT TGAAGAATGCCTCGCTGCCGGGGCATTGCGGGCAACTTGTGTTATGACCAATATGCCGGCATATACCGATGCTGATCGCC TATCGAAGGATTTTCCTTCTGCTTCGATTGGAATCCACTGGACATTGACAGCAGGTACGCCGGTAGCACCGTTGTCTGAA GTGCCTGATCTGGTTGCCCCCAATGGACAATTCTGGCCGGCGGCAGAGTTTCGGCAGCGCTGGTTGTCGCGTCGCATATC ACCGACTCAGGTTGTCATTGAATTGCAGGCCCAGCACGCTCGATTTGTTGAACTGATCGGACAGCCTGCATTTTGGAATA CTCACCAGAATGTGCATGTGTTGCCCCGCCTCTTCCCGCTGGTGGTTGATCTGGCCCACCGACTCGGTATTCCGGCTATG CGCTCACACCGGCGGATTACAGCGCCTCGTCATAGTTCGACGTTGCGGTACTATCTTACCCATCCAATCTACTGGTTAAA GGGGCAAATCATTGCGCGTTGGGCCGCTGCGGCGGAGAAGCGAGGTTTACGGATGCCGGCCGGTGTGGTGAGCACACCGG GCTTTGGGCCGGGAAAGGTTGCTATCGATCAGATTATAGCGCGCATACCCTGGCCTCGTCGTCTCCCCGCCGAACTGGTT ATCCACCCGGCAACGCGGGTTATTCCCGGACTCTTCGGGGGTCTAACCGAATCGCGCCTGCGCGAATTTGAAGTCTTTCG CGATCCGACATTAGTAGAGCGATTGGCAGCAATGGGCGTACAGCCGGTTGGTTTCGAGGTGCTGTGA
Upstream 100 bases:
>100_bases TACGACAGGCCATGGGAGCTGAGGGTCGGCGACGGGTAATTCATGAATACAACTGGCAACGTGAAGCACAATATTTGCTG GCATTATACGCAGAGCTGTT
Downstream 100 bases:
>100_bases TGAGATTGGTACCGCTTCCCTCTCAGCAACAACTCTACGATCATTCACCCCGCTGGTTGCAACGGATTCTGGTGAATGCG GAAGCAGTGCGTCGCGAATG
Product: YdjC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSNYRNPHQLIITADDYGMCPEVNRAIEECLAAGALRATCVMTNMPAYTDADRLSKDFPSASIGIHWTLTAGTPVAPLSE VPDLVAPNGQFWPAAEFRQRWLSRRISPTQVVIELQAQHARFVELIGQPAFWNTHQNVHVLPRLFPLVVDLAHRLGIPAM RSHRRITAPRHSSTLRYYLTHPIYWLKGQIIARWAAAAEKRGLRMPAGVVSTPGFGPGKVAIDQIIARIPWPRRLPAELV IHPATRVIPGLFGGLTESRLREFEVFRDPTLVERLAAMGVQPVGFEVL
Sequences:
>Translated_288_residues MSNYRNPHQLIITADDYGMCPEVNRAIEECLAAGALRATCVMTNMPAYTDADRLSKDFPSASIGIHWTLTAGTPVAPLSE VPDLVAPNGQFWPAAEFRQRWLSRRISPTQVVIELQAQHARFVELIGQPAFWNTHQNVHVLPRLFPLVVDLAHRLGIPAM RSHRRITAPRHSSTLRYYLTHPIYWLKGQIIARWAAAAEKRGLRMPAGVVSTPGFGPGKVAIDQIIARIPWPRRLPAELV IHPATRVIPGLFGGLTESRLREFEVFRDPTLVERLAAMGVQPVGFEVL >Mature_287_residues SNYRNPHQLIITADDYGMCPEVNRAIEECLAAGALRATCVMTNMPAYTDADRLSKDFPSASIGIHWTLTAGTPVAPLSEV PDLVAPNGQFWPAAEFRQRWLSRRISPTQVVIELQAQHARFVELIGQPAFWNTHQNVHVLPRLFPLVVDLAHRLGIPAMR SHRRITAPRHSSTLRYYLTHPIYWLKGQIIARWAAAAEKRGLRMPAGVVSTPGFGPGKVAIDQIIARIPWPRRLPAELVI HPATRVIPGLFGGLTESRLREFEVFRDPTLVERLAAMGVQPVGFEVL
Specific function: Unknown
COG id: COG3394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0249 family [H]
Homologues:
Organism=Homo sapiens, GI63054868, Length=301, Percent_Identity=29.9003322259136, Blast_Score=84, Evalue=2e-16, Organism=Escherichia coli, GI1788028, Length=158, Percent_Identity=32.2784810126582, Blast_Score=85, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002509 - InterPro: IPR006879 - InterPro: IPR022948 [H]
Pfam domain/function: PF04794 YdjC [H]
EC number: NA
Molecular weight: Translated: 32176; Mature: 32045
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNYRNPHQLIITADDYGMCPEVNRAIEECLAAGALRATCVMTNMPAYTDADRLSKDFPS CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHEEECCCCCCCHHHHHHCCCC ASIGIHWTLTAGTPVAPLSEVPDLVAPNGQFWPAAEFRQRWLSRRISPTQVVIELQAQHA CCEEEEEEEECCCCCCCHHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCHHEEEEEHHHHH RFVELIGQPAFWNTHQNVHVLPRLFPLVVDLAHRLGIPAMRSHRRITAPRHSSTLRYYLT HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEC HPIYWLKGQIIARWAAAAEKRGLRMPAGVVSTPGFGPGKVAIDQIIARIPWPRRLPAELV CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHE IHPATRVIPGLFGGLTESRLREFEVFRDPTLVERLAAMGVQPVGFEVL ECCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEC >Mature Secondary Structure SNYRNPHQLIITADDYGMCPEVNRAIEECLAAGALRATCVMTNMPAYTDADRLSKDFPS CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHEEECCCCCCCHHHHHHCCCC ASIGIHWTLTAGTPVAPLSEVPDLVAPNGQFWPAAEFRQRWLSRRISPTQVVIELQAQHA CCEEEEEEEECCCCCCCHHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCHHEEEEEHHHHH RFVELIGQPAFWNTHQNVHVLPRLFPLVVDLAHRLGIPAMRSHRRITAPRHSSTLRYYLT HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEC HPIYWLKGQIIARWAAAAEKRGLRMPAGVVSTPGFGPGKVAIDQIIARIPWPRRLPAELV CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHE IHPATRVIPGLFGGLTESRLREFEVFRDPTLVERLAAMGVQPVGFEVL ECCHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407820 [H]