| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525539
Identifier: 222525539
GI number: 222525539
Start: 2894128
End: 2895483
Strand: Direct
Name: 222525539
Synonym: Chy400_2288
Alternate gene names: NA
Gene position: 2894128-2895483 (Clockwise)
Preceding gene: 222525538
Following gene: 222525540
Centisome position: 54.93
GC content: 54.57
Gene sequence:
>1356_bases ATGATTGTTCCTGGCCCAATCATTCTGAACCCGATAGAACTGGCGTTGCTCGGATTAGTGTGCCTCTATGCTGTCTGGCG TGGGCGGCCAGAGATTCCGCTGGCGATGTATTTGTCGGTGGCACTCTGGACTCGCACGGTCTTCGTGGGGCCGAGCGCAG CTACATGGCCGTTGCTGATGACGATTGTACTGGCACTCATCCGGTATCTCCACGTCGTGCGACCGTGGTCGTTGTTGCCA CAGCGACTCGATGCAACCACCCGCCAACTGGTGCCGGCTACCGATTCGTGGATCATACCGTGGATGGGATTGTGGTGGAG CTGGGCGCTTTGTGTACTCTTTCTGTTTGATTATACGAATAAGATGACAATTGCGCGTCCGGTATTGCTGTTCATTGTCT TTGGCTCGCTCGTTGCCTTGATGGTGATCCGTGACGCTGGTGCAGCAAGACGGTTTGCACTTGCCTACCTGTTGGCCAGT GCCTATGGGTTGTATGCGGCGCTGCGCTTCATCGATGTTCCGCTCAGTTATCTGTTAAGTGATCCTGGTCTTTCATCGTT GCCGTATCGGAATCTTGGTATTCGTGAATACAACTTCTTCTCCCACCACTTAAGTATTGCGTTTCTGTTGGGACTTGGCC TTTTCCTCCAGGCCCGGCATTTATGGTCGATGATAGCCGTGCTTGCTCTGGCGCTCTTCTGTGGTTACGGAGTATTTCTT ACCGGCGCCCGGCAATCACTCAGCGGGGCGGGATTAGCTGCCAGTTTGATCTTCGCCTGGGCATTGTCGCGTTCGGGCAA GAAGCCCTGGCGCGTACCGCTGGCGATTGCTGCAATCGTAGTGATTGTCGTCTTTCTCTATCAGGTTGCTCCCCACCTGG TGGTACGGGAAGGTGAGAGTGGTCTTGGCGAGTCGTTCAATGTCTTTGAAGATCGCGGTGGTTTGTGGTTGATTGGCTGG AACTATTTTCTCGCTTCACCGGTGTGGGGGTGGGGGTTTGAACAGAAACTCTGGTCACACAATATCTTTATCGGTACCCT GGCCGACCAGGGGCTGGTTGGGATGGTGTTCCTGATTGGTTATCTCGTTTGGGCATTGCGTCGGTTGCCGGCGGTCTGGG CACAGACCCCCAACGATGATCGGTCCATTTGGCGGGTTGTCTTCTTTAGTTTGTTTCTCTTCGCGGTGGTACACGGCCAG GCATCGGGAAATACGATGTCAACCGCTCATTTGCACTGGCCGCTTTGGGCAGTGTGGGCACTCAGTATCGGTGTAGCGAC GGCTCCTGCTCATCAACCATTGCCGGCACTATTGCGAGTACGTCAGCATGCAGTTACAGCAGGGGTACAGCAATGA
Upstream 100 bases:
>100_bases TGCCGGCCTGCGCATGCTCTGGTGGCTCTGGCAAAAACACGCCAGTTTGCGGAATCGGCTGTATCGCGCCTACGGTGTAG AGTGCTAGCAAGGCGATGCG
Downstream 100 bases:
>100_bases ATGACCCGCGGATCACGTTCGGCATGATTGTGCTCAATGGCGAGCCATTTCTACGCTACAATTTGCGTGCCATTTACCCC TATGCGCATCAGATCATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MIVPGPIILNPIELALLGLVCLYAVWRGRPEIPLAMYLSVALWTRTVFVGPSAATWPLLMTIVLALIRYLHVVRPWSLLP QRLDATTRQLVPATDSWIIPWMGLWWSWALCVLFLFDYTNKMTIARPVLLFIVFGSLVALMVIRDAGAARRFALAYLLAS AYGLYAALRFIDVPLSYLLSDPGLSSLPYRNLGIREYNFFSHHLSIAFLLGLGLFLQARHLWSMIAVLALALFCGYGVFL TGARQSLSGAGLAASLIFAWALSRSGKKPWRVPLAIAAIVVIVVFLYQVAPHLVVREGESGLGESFNVFEDRGGLWLIGW NYFLASPVWGWGFEQKLWSHNIFIGTLADQGLVGMVFLIGYLVWALRRLPAVWAQTPNDDRSIWRVVFFSLFLFAVVHGQ ASGNTMSTAHLHWPLWAVWALSIGVATAPAHQPLPALLRVRQHAVTAGVQQ
Sequences:
>Translated_451_residues MIVPGPIILNPIELALLGLVCLYAVWRGRPEIPLAMYLSVALWTRTVFVGPSAATWPLLMTIVLALIRYLHVVRPWSLLP QRLDATTRQLVPATDSWIIPWMGLWWSWALCVLFLFDYTNKMTIARPVLLFIVFGSLVALMVIRDAGAARRFALAYLLAS AYGLYAALRFIDVPLSYLLSDPGLSSLPYRNLGIREYNFFSHHLSIAFLLGLGLFLQARHLWSMIAVLALALFCGYGVFL TGARQSLSGAGLAASLIFAWALSRSGKKPWRVPLAIAAIVVIVVFLYQVAPHLVVREGESGLGESFNVFEDRGGLWLIGW NYFLASPVWGWGFEQKLWSHNIFIGTLADQGLVGMVFLIGYLVWALRRLPAVWAQTPNDDRSIWRVVFFSLFLFAVVHGQ ASGNTMSTAHLHWPLWAVWALSIGVATAPAHQPLPALLRVRQHAVTAGVQQ >Mature_451_residues MIVPGPIILNPIELALLGLVCLYAVWRGRPEIPLAMYLSVALWTRTVFVGPSAATWPLLMTIVLALIRYLHVVRPWSLLP QRLDATTRQLVPATDSWIIPWMGLWWSWALCVLFLFDYTNKMTIARPVLLFIVFGSLVALMVIRDAGAARRFALAYLLAS AYGLYAALRFIDVPLSYLLSDPGLSSLPYRNLGIREYNFFSHHLSIAFLLGLGLFLQARHLWSMIAVLALALFCGYGVFL TGARQSLSGAGLAASLIFAWALSRSGKKPWRVPLAIAAIVVIVVFLYQVAPHLVVREGESGLGESFNVFEDRGGLWLIGW NYFLASPVWGWGFEQKLWSHNIFIGTLADQGLVGMVFLIGYLVWALRRLPAVWAQTPNDDRSIWRVVFFSLFLFAVVHGQ ASGNTMSTAHLHWPLWAVWALSIGVATAPAHQPLPALLRVRQHAVTAGVQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50214; Mature: 50214
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVPGPIILNPIELALLGLVCLYAVWRGRPEIPLAMYLSVALWTRTVFVGPSAATWPLLM CCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHH TIVLALIRYLHVVRPWSLLPQRLDATTRQLVPATDSWIIPWMGLWWSWALCVLFLFDYTN HHHHHHHHHHHHHCCHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC KMTIARPVLLFIVFGSLVALMVIRDAGAARRFALAYLLASAYGLYAALRFIDVPLSYLLS CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DPGLSSLPYRNLGIREYNFFSHHLSIAFLLGLGLFLQARHLWSMIAVLALALFCGYGVFL CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH TGARQSLSGAGLAASLIFAWALSRSGKKPWRVPLAIAAIVVIVVFLYQVAPHLVVREGES HCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCC GLGESFNVFEDRGGLWLIGWNYFLASPVWGWGFEQKLWSHNIFIGTLADQGLVGMVFLIG CCCCCCCHHCCCCCEEEEEHHHHHCCCCCCCCHHHHHHCCCEEEEECCCCCHHHHHHHHH YLVWALRRLPAVWAQTPNDDRSIWRVVFFSLFLFAVVHGQASGNTMSTAHLHWPLWAVWA HHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHH LSIGVATAPAHQPLPALLRVRQHAVTAGVQQ HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIVPGPIILNPIELALLGLVCLYAVWRGRPEIPLAMYLSVALWTRTVFVGPSAATWPLLM CCCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEECCCCHHHHHHH TIVLALIRYLHVVRPWSLLPQRLDATTRQLVPATDSWIIPWMGLWWSWALCVLFLFDYTN HHHHHHHHHHHHHCCHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC KMTIARPVLLFIVFGSLVALMVIRDAGAARRFALAYLLASAYGLYAALRFIDVPLSYLLS CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DPGLSSLPYRNLGIREYNFFSHHLSIAFLLGLGLFLQARHLWSMIAVLALALFCGYGVFL CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH TGARQSLSGAGLAASLIFAWALSRSGKKPWRVPLAIAAIVVIVVFLYQVAPHLVVREGES HCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCC GLGESFNVFEDRGGLWLIGWNYFLASPVWGWGFEQKLWSHNIFIGTLADQGLVGMVFLIG CCCCCCCHHCCCCCEEEEEHHHHHCCCCCCCCHHHHHHCCCEEEEECCCCCHHHHHHHHH YLVWALRRLPAVWAQTPNDDRSIWRVVFFSLFLFAVVHGQASGNTMSTAHLHWPLWAVWA HHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHH LSIGVATAPAHQPLPALLRVRQHAVTAGVQQ HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA