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The map label for this gene is ynaJ [H]

Identifier: 222525498

GI number: 222525498

Start: 2842441

End: 2843778

Strand: Direct

Name: ynaJ [H]

Synonym: Chy400_2246

Alternate gene names: 222525498

Gene position: 2842441-2843778 (Clockwise)

Preceding gene: 222525497

Following gene: 222525499

Centisome position: 53.95

GC content: 56.2

Gene sequence:

>1338_bases
ATGAGTCGGCTGCTGCGCTACATCACGTATTCGATGGGCAATTTTGCCAACACAATTGCCTACCAGGTCTTCGGTAATCG
GATTCAGTTCTACTATGTGGATGTGTTAGGGCTAAGTGCCGCTACTGCCGGTATTATCTGGACAATCTACGGTTTGTGGA
ATGCGATTAATGACCCCTTGATGGGGCAGTTATCCGACCGCACGCGCACACCAATGGGACGGCGTGTGCCGTATGTCGTC
TTTGGCGCAGTGCCGCTCGGCCTCTCATTCTTTTTTCTCTGGACACCGCCGGGGCAGTCACCCTGGTTGTTAGCCGCCTA
TTTTCTCATCATTCTGTTCATCTTCGATACCCTCTACAGCCTGACCATTATCGCCTACAATTCGCTCTTTCCTGAAGTAG
CCCCTAATTTACGCGAACGGATCAATCTGTCGGCAACCCGTGAGGTGTTGGCGACCATTGCCCTTCTGCTGTCGTTTATT
CTGGCGCCGATTCTGGCCGAGACGGTGGGCTACATCTGGATGGGGGCAATCATGGGAACGCTGGTAGGGGTGGGCTACCT
GATCGCAATGATTGGGGTGCGTGAAGCTCCGGTGCAGCATGACGGTCAGCAGGTACATCTGCTCACCGCGTTGCGGATTA
CGCTCGCCAGTCGACCGTTTCGCTGGTTTATTGGCGCGAACATCGCCAAAGAGTATGTCTGGCTGGCACTGGCTGCTATG
CTCCCATTCTGGCGCAAATATGCGCTGGGTATTCAGGGGCCTATCGAAGTGGCCGGTATCCGGCTGAGCGCTGGCGATGC
AGAAGCGATTCTGCTGGGAGTGCCGATTTTGCTCACCATTCCGATGCTGCTGGCCTGGCGACCACTGGTCACCCGGATCG
GGCCGCGGCGCGCCTGGATGATTACCAGTCTCTGCTTTATTCCCGGTTTTGTGATGATGATGCTGGCAACCGATTTTGTC
TCCGGCCTGATGGGCACACTGCTGGTGGTGCCAGGGCTTGCCGGTTCGATGTTGATGCCGTTTCCGCTGATCTCCGAGGT
GATCGATGACGACGCGGCTCGCCATGGTGTACGCCGGGAAGGTATCTTCTTCGGGATGAATGGTGGGATTACCAAACTGG
CCTTCTCGGCGCAAGGGGTGCTCTTTGCGAGTGTGCTGTCGCTGGCCGGCTATGTCGCCGGGAGTGATCTGCAAACTCCT
GGCGCCATTTGGGGCATTCGTTTTCTGATCGGTGGCACGACAATTATCGCCGCCTTGATCATCGTCTTTTGTATGTGGAA
GTATCCGTTGGAGCGAGCGCCGAAAGCGGCATTGGCGCCGGAAAGGGTTGTGTCGTGA

Upstream 100 bases:

>100_bases
GCAATTTTTGCACCTTTACACGGCCAGGTTGCTGGGCTTTCCCGATCCATCAGAACCCGGCAATAGCACATAAGGGCGGT
GATCCAGGAAGGAGCGAGGT

Downstream 100 bases:

>100_bases
GTTTTCCTGCTACAGGAATGGCTCCAGCCGAAATTCTGAGCGCACTACAGCGCTTTAAAATGGCCGATCTCGATTGGCAA
CACGGTCGGGTGTGGGCGTA

Product: Na+/melibiose symporter and related transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MSRLLRYITYSMGNFANTIAYQVFGNRIQFYYVDVLGLSAATAGIIWTIYGLWNAINDPLMGQLSDRTRTPMGRRVPYVV
FGAVPLGLSFFFLWTPPGQSPWLLAAYFLIILFIFDTLYSLTIIAYNSLFPEVAPNLRERINLSATREVLATIALLLSFI
LAPILAETVGYIWMGAIMGTLVGVGYLIAMIGVREAPVQHDGQQVHLLTALRITLASRPFRWFIGANIAKEYVWLALAAM
LPFWRKYALGIQGPIEVAGIRLSAGDAEAILLGVPILLTIPMLLAWRPLVTRIGPRRAWMITSLCFIPGFVMMMLATDFV
SGLMGTLLVVPGLAGSMLMPFPLISEVIDDDAARHGVRREGIFFGMNGGITKLAFSAQGVLFASVLSLAGYVAGSDLQTP
GAIWGIRFLIGGTTIIAALIIVFCMWKYPLERAPKAALAPERVVS

Sequences:

>Translated_445_residues
MSRLLRYITYSMGNFANTIAYQVFGNRIQFYYVDVLGLSAATAGIIWTIYGLWNAINDPLMGQLSDRTRTPMGRRVPYVV
FGAVPLGLSFFFLWTPPGQSPWLLAAYFLIILFIFDTLYSLTIIAYNSLFPEVAPNLRERINLSATREVLATIALLLSFI
LAPILAETVGYIWMGAIMGTLVGVGYLIAMIGVREAPVQHDGQQVHLLTALRITLASRPFRWFIGANIAKEYVWLALAAM
LPFWRKYALGIQGPIEVAGIRLSAGDAEAILLGVPILLTIPMLLAWRPLVTRIGPRRAWMITSLCFIPGFVMMMLATDFV
SGLMGTLLVVPGLAGSMLMPFPLISEVIDDDAARHGVRREGIFFGMNGGITKLAFSAQGVLFASVLSLAGYVAGSDLQTP
GAIWGIRFLIGGTTIIAALIIVFCMWKYPLERAPKAALAPERVVS
>Mature_444_residues
SRLLRYITYSMGNFANTIAYQVFGNRIQFYYVDVLGLSAATAGIIWTIYGLWNAINDPLMGQLSDRTRTPMGRRVPYVVF
GAVPLGLSFFFLWTPPGQSPWLLAAYFLIILFIFDTLYSLTIIAYNSLFPEVAPNLRERINLSATREVLATIALLLSFIL
APILAETVGYIWMGAIMGTLVGVGYLIAMIGVREAPVQHDGQQVHLLTALRITLASRPFRWFIGANIAKEYVWLALAAML
PFWRKYALGIQGPIEVAGIRLSAGDAEAILLGVPILLTIPMLLAWRPLVTRIGPRRAWMITSLCFIPGFVMMMLATDFVS
GLMGTLLVVPGLAGSMLMPFPLISEVIDDDAARHGVRREGIFFGMNGGITKLAFSAQGVLFASVLSLAGYVAGSDLQTPG
AIWGIRFLIGGTTIIAALIIVFCMWKYPLERAPKAALAPERVVS

Specific function: Unknown

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI87082306, Length=163, Percent_Identity=32.5153374233129, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786466, Length=179, Percent_Identity=28.4916201117318, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI145693206, Length=419, Percent_Identity=24.3436754176611, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787902, Length=454, Percent_Identity=25.9911894273128, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1790561, Length=423, Percent_Identity=20.3309692671395, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI48994989, Length=444, Percent_Identity=24.0990990990991, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71983060, Length=197, Percent_Identity=26.9035532994924, Blast_Score=68, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48793; Mature: 48662

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLLRYITYSMGNFANTIAYQVFGNRIQFYYVDVLGLSAATAGIIWTIYGLWNAINDPL
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCH
MGQLSDRTRTPMGRRVPYVVFGAVPLGLSFFFLWTPPGQSPWLLAAYFLIILFIFDTLYS
HCCCCHHCCCCCCCCCCEEEEECHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
LTIIAYNSLFPEVAPNLRERINLSATREVLATIALLLSFILAPILAETVGYIWMGAIMGT
HHHHHHHHHCHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGVGYLIAMIGVREAPVQHDGQQVHLLTALRITLASRPFRWFIGANIAKEYVWLALAAM
HHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LPFWRKYALGIQGPIEVAGIRLSAGDAEAILLGVPILLTIPMLLAWRPLVTRIGPRRAWM
HHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHH
ITSLCFIPGFVMMMLATDFVSGLMGTLLVVPGLAGSMLMPFPLISEVIDDDAARHGVRRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHCCHHHHCCCCCC
GIFFGMNGGITKLAFSAQGVLFASVLSLAGYVAGSDLQTPGAIWGIRFLIGGTTIIAALI
CEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IVFCMWKYPLERAPKAALAPERVVS
HHHHHHHCCHHHCCCCCCCCHHHCC
>Mature Secondary Structure 
SRLLRYITYSMGNFANTIAYQVFGNRIQFYYVDVLGLSAATAGIIWTIYGLWNAINDPL
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCH
MGQLSDRTRTPMGRRVPYVVFGAVPLGLSFFFLWTPPGQSPWLLAAYFLIILFIFDTLYS
HCCCCHHCCCCCCCCCCEEEEECHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
LTIIAYNSLFPEVAPNLRERINLSATREVLATIALLLSFILAPILAETVGYIWMGAIMGT
HHHHHHHHHCHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGVGYLIAMIGVREAPVQHDGQQVHLLTALRITLASRPFRWFIGANIAKEYVWLALAAM
HHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LPFWRKYALGIQGPIEVAGIRLSAGDAEAILLGVPILLTIPMLLAWRPLVTRIGPRRAWM
HHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHH
ITSLCFIPGFVMMMLATDFVSGLMGTLLVVPGLAGSMLMPFPLISEVIDDDAARHGVRRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHCCHHHHCCCCCC
GIFFGMNGGITKLAFSAQGVLFASVLSLAGYVAGSDLQTPGAIWGIRFLIGGTTIIAALI
CEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IVFCMWKYPLERAPKAALAPERVVS
HHHHHHHCCHHHCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]