| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525430
Identifier: 222525430
GI number: 222525430
Start: 2756801
End: 2757979
Strand: Reverse
Name: 222525430
Synonym: Chy400_2175
Alternate gene names: NA
Gene position: 2757979-2756801 (Counterclockwise)
Preceding gene: 222525431
Following gene: 222525428
Centisome position: 52.34
GC content: 52.42
Gene sequence:
>1179_bases ATGTCAGAACCAATCGTTCTCTCAACCGAACAACCACCAACACCCTACCGGCCAAGGGCCTGGCTCGCTGGTGTGGGAAT CTATATCTTCTTAGTGAGCATCGGAATCAGTATCGGTGGCGAGTTCGAGAGCTTTACTGCGGCAAGTTTTAATGTGCTTC CATTCGCTATCCTGGCAATTCTGGCCTACTTTGCCGGTACATCGTTCAACTGGGCATGGATCGCAACCGGCTTATGGTTG ATGATCGTTATCGCTATAACTGCTCTGCTGACGTTCGGTTTTGGTGCTGTGAACATCATTGGTATACCTCTTGGCGATAT TGATCCGGCGAATCCACCAGCGCTGACCCAATCTGCCCTGTTGAGTATCCTGATGCTCATACTGGGTATTTTTGGGGCGA TTGGGATCGGGTTTCTTACCCTGCTACCGCCAGTGCGGCGGAGATTGGCACGATTCATTCCGATTGAACCAGCATCATTC GTGCATGCTATCGCCCTGGCCGCGATTGTCTCCATTACCCTGATGTTATTTGTCCCTCTCCTGCTCACCGGTGAACCACC ACTTTTGAACTTGGTGCGCTCTCTCAGCGGCGAGGAACTTAATAATACCAATCCTGACGCCGAATTGCGTAATCAGATCT ACGGACTGATCTGGACAATTCCGGCAGCACTTCTCGCCGTTGGCTTCGGCATTCGGCGCAACCTGTCCGCTACTCTGTCA CGGCTAGGTCTGGTCATGCCGACAAGTCAGCAGTTCTGGAATGGGATCGGTCTTGGGATTGGGTTGGCCATCGCAATGTT GTTTCTGCTTAGTCCGCTGCAAGAGTGGATCTGGCAGAGTCTTGGCTGGCCGACGACTGACGAAGATGCCTTCCTCGAAC TCATGTCATACGCCATCAGTCCGATAGGTGCTGTTGTCATTGGGGTGACTGCCGGGTTGGGCGAAGAGCTGGCAATACGT GGTGTCTTGCAACCACGCCTGGGCATCTTGCTCTCCAATCTCTTCTTCGTCAGCCTGCACGCTTTTCAGTACCACTGGGA TGGTCTGCTCGTAGTGTTTGCCATCGGCATGATCTGTGGTCTGATACGAAAGTACACAAATACAACGACCGCGGCTCTGG TGCATGGGACGTACAATTTTGTACTGGTAATGATGGCAGCGCTCGTCGAAAAGCTGTAA
Upstream 100 bases:
>100_bases TCTTGCGCAAACGAAACGGATCGGTCACACTGTTCGTATACGAACCATGTAATAATGCTTTTCAGAAGTATCACGTTACG CTGGTGGAGGAATTACAGCC
Downstream 100 bases:
>100_bases CAACCGGTTCACGTATCCGTAGGGGCGGATTCAAAACCCGCCCTCGCCCATTCACATTGCCATACGAGGGATGCGGCGAG CGCGGGGGCAAAGGGTACGC
Product: abortive infection protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MSEPIVLSTEQPPTPYRPRAWLAGVGIYIFLVSIGISIGGEFESFTAASFNVLPFAILAILAYFAGTSFNWAWIATGLWL MIVIAITALLTFGFGAVNIIGIPLGDIDPANPPALTQSALLSILMLILGIFGAIGIGFLTLLPPVRRRLARFIPIEPASF VHAIALAAIVSITLMLFVPLLLTGEPPLLNLVRSLSGEELNNTNPDAELRNQIYGLIWTIPAALLAVGFGIRRNLSATLS RLGLVMPTSQQFWNGIGLGIGLAIAMLFLLSPLQEWIWQSLGWPTTDEDAFLELMSYAISPIGAVVIGVTAGLGEELAIR GVLQPRLGILLSNLFFVSLHAFQYHWDGLLVVFAIGMICGLIRKYTNTTTAALVHGTYNFVLVMMAALVEKL
Sequences:
>Translated_392_residues MSEPIVLSTEQPPTPYRPRAWLAGVGIYIFLVSIGISIGGEFESFTAASFNVLPFAILAILAYFAGTSFNWAWIATGLWL MIVIAITALLTFGFGAVNIIGIPLGDIDPANPPALTQSALLSILMLILGIFGAIGIGFLTLLPPVRRRLARFIPIEPASF VHAIALAAIVSITLMLFVPLLLTGEPPLLNLVRSLSGEELNNTNPDAELRNQIYGLIWTIPAALLAVGFGIRRNLSATLS RLGLVMPTSQQFWNGIGLGIGLAIAMLFLLSPLQEWIWQSLGWPTTDEDAFLELMSYAISPIGAVVIGVTAGLGEELAIR GVLQPRLGILLSNLFFVSLHAFQYHWDGLLVVFAIGMICGLIRKYTNTTTAALVHGTYNFVLVMMAALVEKL >Mature_391_residues SEPIVLSTEQPPTPYRPRAWLAGVGIYIFLVSIGISIGGEFESFTAASFNVLPFAILAILAYFAGTSFNWAWIATGLWLM IVIAITALLTFGFGAVNIIGIPLGDIDPANPPALTQSALLSILMLILGIFGAIGIGFLTLLPPVRRRLARFIPIEPASFV HAIALAAIVSITLMLFVPLLLTGEPPLLNLVRSLSGEELNNTNPDAELRNQIYGLIWTIPAALLAVGFGIRRNLSATLSR LGLVMPTSQQFWNGIGLGIGLAIAMLFLLSPLQEWIWQSLGWPTTDEDAFLELMSYAISPIGAVVIGVTAGLGEELAIRG VLQPRLGILLSNLFFVSLHAFQYHWDGLLVVFAIGMICGLIRKYTNTTTAALVHGTYNFVLVMMAALVEKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42270; Mature: 42139
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPIVLSTEQPPTPYRPRAWLAGVGIYIFLVSIGISIGGEFESFTAASFNVLPFAILAI CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHH LAYFAGTSFNWAWIATGLWLMIVIAITALLTFGFGAVNIIGIPLGDIDPANPPALTQSAL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCHHHHHHH LSILMLILGIFGAIGIGFLTLLPPVRRRLARFIPIEPASFVHAIALAAIVSITLMLFVPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLTGEPPLLNLVRSLSGEELNNTNPDAELRNQIYGLIWTIPAALLAVGFGIRRNLSATLS HHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGLVMPTSQQFWNGIGLGIGLAIAMLFLLSPLQEWIWQSLGWPTTDEDAFLELMSYAIS HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH PIGAVVIGVTAGLGEELAIRGVLQPRLGILLSNLFFVSLHAFQYHWDGLLVVFAIGMICG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIRKYTNTTTAALVHGTYNFVLVMMAALVEKL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEPIVLSTEQPPTPYRPRAWLAGVGIYIFLVSIGISIGGEFESFTAASFNVLPFAILAI CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHH LAYFAGTSFNWAWIATGLWLMIVIAITALLTFGFGAVNIIGIPLGDIDPANPPALTQSAL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCHHHHHHH LSILMLILGIFGAIGIGFLTLLPPVRRRLARFIPIEPASFVHAIALAAIVSITLMLFVPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLTGEPPLLNLVRSLSGEELNNTNPDAELRNQIYGLIWTIPAALLAVGFGIRRNLSATLS HHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGLVMPTSQQFWNGIGLGIGLAIAMLFLLSPLQEWIWQSLGWPTTDEDAFLELMSYAIS HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH PIGAVVIGVTAGLGEELAIRGVLQPRLGILLSNLFFVSLHAFQYHWDGLLVVFAIGMICG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIRKYTNTTTAALVHGTYNFVLVMMAALVEKL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA