Click here to switch to the map view.

The map label for this gene is 222525420

Identifier: 222525420

GI number: 222525420

Start: 2743189

End: 2744574

Strand: Reverse

Name: 222525420

Synonym: Chy400_2165

Alternate gene names: NA

Gene position: 2744574-2743189 (Counterclockwise)

Preceding gene: 222525421

Following gene: 222525419

Centisome position: 52.09

GC content: 59.45

Gene sequence:

>1386_bases
ATGAACGTCTTACTTATCTCAACCTATGAACTTGGCCACCAACCGCTCAGCCTGGCATCACCCGCCGCGTGGCTACGCCG
GGCAGGGGCAGATGTGGTTTGTGTTGACACCAGTGTCACACCGTTGACGGCAGAAATGGCCGCCAATGCCGCACTAATCG
GAATCTCGGTACCGATGCACACGGCCACCCGGCTGGCGTTGGATATGTTGCCACACCTGCGGGCAGCAGCACCAAACGCA
TATATTGTCTGCTACGGACTGTACGCTCCGCTCAATGCCGCAATCCTGCATCAGGCTGGGGCCGATTGTTGCCTGGGTGG
CGAAGTTGAGGAACAGCTCACGGCGATCTGGCAGCACATAGCCGCCGGCAAACGCCCGTCAGTTGCCGACACCATTCTCC
TCAATCGGCTCGATCTCATCCCGCCTGACCGGAACGGCTTACCGCCTCTCGACCGCTATGCAACGTTGATCAGCGGTGGC
AAGACCCATCTGGCCGGGTATACCGAAACAACTCGTGGCTGCAAACACCTCTGCCGTCACTGCCCGGTTGTCCCGGTTTA
CAACGGGCATTTTCGCGTGGTACCGCGCTCAACCGTGCTGGCCGACATCCGGGCACAGGTCGCTGCCGGAGCGCGCCATA
TCACCTTTGGCGACCCGGATTTTCTGAATGGCCCCGGCCACGTCTTACCGATTGTGCGCGCTATGCACGCCGAGTTTCCC
GACCTGACCTACGATGTCACGATCAAGATCGAGCACATCATTCGGTATGCTCATCTGTTGCCGGAACTACGCGCAACCGG
CTGTATCATGGTCGTGAGCGCCGTTGAAGCGCTCGATGACACCATCCTGACCCGCTTTGCCAAACGTCACAGCCGGGCCG
ATGTGGTGCGTGCGGTTCAGCTTCTACGGGAACACGATATTGCCCTGAATGCAACATTCGTGGCCTTTACACCGTGGACA
ACACGCCAGGTGTATCGCGACTTTTTGCTTGGTATCGCTGAATTGGGCCTGATCGAGAGTGTTGCTCCGGTTCAGTACGG
CTTACGGCTGCTCATACCTGAAGGATCGCGGTTGCTTGAGCTGCCCGATGTACAGGCGCTGGTTGAGCCGTTCGATCCGG
AGGCGCTGGTGTACCCCTGGCGGCATCCCGACCCGGCGATGGACACGTTACAACGCGAGGTGATGGCGCTTGCCCAGTGC
AGCGAGCAGTGTGGCGAGTCGCGCAGCAGCTTCTATCTGCGACTGCTCGACCTGTGTGATCGGATTATTGGCCCTGGCCC
GCGCCCGGCGACCGTGCCAGATGCTGCACCGGTGCCAAGGCTGAGCGAACCGTGGTACTGTTGTGCTGAACCGACAGACA
GCCAGTTGATGGCAAAATATTTGTAG

Upstream 100 bases:

>100_bases
ATGAAATACGTTCTCGTGTGTCTGATATTACACCAGATTTGATGTAACATCCTGATGGCCCGCTGTTCGTCAACATCTCA
GTTTGGAGTACAATATCATC

Downstream 100 bases:

>100_bases
CCTGTGTACGGGAATGCGACAGCTATGACCGAGATCGGTATGCGTCCACATCTGTTGTTGCTCACCACACCATCATCGTA
CCGGCTGCCAGCCTTTCTGG

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MNVLLISTYELGHQPLSLASPAAWLRRAGADVVCVDTSVTPLTAEMAANAALIGISVPMHTATRLALDMLPHLRAAAPNA
YIVCYGLYAPLNAAILHQAGADCCLGGEVEEQLTAIWQHIAAGKRPSVADTILLNRLDLIPPDRNGLPPLDRYATLISGG
KTHLAGYTETTRGCKHLCRHCPVVPVYNGHFRVVPRSTVLADIRAQVAAGARHITFGDPDFLNGPGHVLPIVRAMHAEFP
DLTYDVTIKIEHIIRYAHLLPELRATGCIMVVSAVEALDDTILTRFAKRHSRADVVRAVQLLREHDIALNATFVAFTPWT
TRQVYRDFLLGIAELGLIESVAPVQYGLRLLIPEGSRLLELPDVQALVEPFDPEALVYPWRHPDPAMDTLQREVMALAQC
SEQCGESRSSFYLRLLDLCDRIIGPGPRPATVPDAAPVPRLSEPWYCCAEPTDSQLMAKYL

Sequences:

>Translated_461_residues
MNVLLISTYELGHQPLSLASPAAWLRRAGADVVCVDTSVTPLTAEMAANAALIGISVPMHTATRLALDMLPHLRAAAPNA
YIVCYGLYAPLNAAILHQAGADCCLGGEVEEQLTAIWQHIAAGKRPSVADTILLNRLDLIPPDRNGLPPLDRYATLISGG
KTHLAGYTETTRGCKHLCRHCPVVPVYNGHFRVVPRSTVLADIRAQVAAGARHITFGDPDFLNGPGHVLPIVRAMHAEFP
DLTYDVTIKIEHIIRYAHLLPELRATGCIMVVSAVEALDDTILTRFAKRHSRADVVRAVQLLREHDIALNATFVAFTPWT
TRQVYRDFLLGIAELGLIESVAPVQYGLRLLIPEGSRLLELPDVQALVEPFDPEALVYPWRHPDPAMDTLQREVMALAQC
SEQCGESRSSFYLRLLDLCDRIIGPGPRPATVPDAAPVPRLSEPWYCCAEPTDSQLMAKYL
>Mature_461_residues
MNVLLISTYELGHQPLSLASPAAWLRRAGADVVCVDTSVTPLTAEMAANAALIGISVPMHTATRLALDMLPHLRAAAPNA
YIVCYGLYAPLNAAILHQAGADCCLGGEVEEQLTAIWQHIAAGKRPSVADTILLNRLDLIPPDRNGLPPLDRYATLISGG
KTHLAGYTETTRGCKHLCRHCPVVPVYNGHFRVVPRSTVLADIRAQVAAGARHITFGDPDFLNGPGHVLPIVRAMHAEFP
DLTYDVTIKIEHIIRYAHLLPELRATGCIMVVSAVEALDDTILTRFAKRHSRADVVRAVQLLREHDIALNATFVAFTPWT
TRQVYRDFLLGIAELGLIESVAPVQYGLRLLIPEGSRLLELPDVQALVEPFDPEALVYPWRHPDPAMDTLQREVMALAQC
SEQCGESRSSFYLRLLDLCDRIIGPGPRPATVPDAAPVPRLSEPWYCCAEPTDSQLMAKYL

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50500; Mature: 50500

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLLISTYELGHQPLSLASPAAWLRRAGADVVCVDTSVTPLTAEMAANAALIGISVPMH
CCEEEEEEHHCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHCCEEEEEEECCHH
TATRLALDMLPHLRAAAPNAYIVCYGLYAPLNAAILHQAGADCCLGGEVEEQLTAIWQHI
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCEECCCHHHHHHHHHHHH
AAGKRPSVADTILLNRLDLIPPDRNGLPPLDRYATLISGGKTHLAGYTETTRGCKHLCRH
HCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEECCCCHHHHHHHHHHHH
CPVVPVYNGHFRVVPRSTVLADIRAQVAAGARHITFGDPDFLNGPGHVLPIVRAMHAEFP
CCCCEEECCEEEEEECHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCC
DLTYDVTIKIEHIIRYAHLLPELRATGCIMVVSAVEALDDTILTRFAKRHSRADVVRAVQ
CCEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLREHDIALNATFVAFTPWTTRQVYRDFLLGIAELGLIESVAPVQYGLRLLIPEGSRLLE
HHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEE
LPDVQALVEPFDPEALVYPWRHPDPAMDTLQREVMALAQCSEQCGESRSSFYLRLLDLCD
CCCHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RIIGPGPRPATVPDAAPVPRLSEPWYCCAEPTDSQLMAKYL
HHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCC
>Mature Secondary Structure
MNVLLISTYELGHQPLSLASPAAWLRRAGADVVCVDTSVTPLTAEMAANAALIGISVPMH
CCEEEEEEHHCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHCCEEEEEEECCHH
TATRLALDMLPHLRAAAPNAYIVCYGLYAPLNAAILHQAGADCCLGGEVEEQLTAIWQHI
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCEECCCHHHHHHHHHHHH
AAGKRPSVADTILLNRLDLIPPDRNGLPPLDRYATLISGGKTHLAGYTETTRGCKHLCRH
HCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEECCCCHHHHHHHHHHHH
CPVVPVYNGHFRVVPRSTVLADIRAQVAAGARHITFGDPDFLNGPGHVLPIVRAMHAEFP
CCCCEEECCEEEEEECHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCC
DLTYDVTIKIEHIIRYAHLLPELRATGCIMVVSAVEALDDTILTRFAKRHSRADVVRAVQ
CCEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLREHDIALNATFVAFTPWTTRQVYRDFLLGIAELGLIESVAPVQYGLRLLIPEGSRLLE
HHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEE
LPDVQALVEPFDPEALVYPWRHPDPAMDTLQREVMALAQCSEQCGESRSSFYLRLLDLCD
CCCHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RIIGPGPRPATVPDAAPVPRLSEPWYCCAEPTDSQLMAKYL
HHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA