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The map label for this gene is ydiC [H]

Identifier: 222525400

GI number: 222525400

Start: 2722620

End: 2723297

Strand: Reverse

Name: ydiC [H]

Synonym: Chy400_2145

Alternate gene names: 222525400

Gene position: 2723297-2722620 (Counterclockwise)

Preceding gene: 222525401

Following gene: 222525399

Centisome position: 51.69

GC content: 61.95

Gene sequence:

>678_bases
ATGTTGCTCGCTATCGACACCGCTACCGCACTGACCGGTCTTGCTCTCTATGATGCGCACGGCCCATTAGCCGAAAGCGT
CTGGGAGTCGGGACGTAACCATACTGCGCAACTCTTGCCACAAATCGATGCGCTCCTGCGCTACATCGGTGCAACACCAG
CCGACGTGACCGTGCTGGCGGTCGGATTGGGACCGGGGAGCTGGAGTGGTCTGCGGGTAGGGTTGAGTCTGGCGAAGGGG
ATGGCACTGGCCGGCGATCTGCCATTGATTGGGATTGCAACCCTTGAGGCGTTGGCGTACCAGTACGCGCCGACCCCATT
GCCGGTCTATCCACTGATACGGCTGGGGCGTGATCGTTATGCGACGGCTCCTTTTGTGGCGCAGGATCGCCTTGAGCGCC
TGGCGCCTGATCGTAATCTCACGCTCGCTGAACTCTGTGCCGACGTGAGTGGGCGTGCGCTCTTTTGTGGTGATCTCGAT
GCAGCGACGATAGCTGCCCTGCAACGCGGTTTGGGTGAGCGGGCTGTGTTGCCGGCACCGGCAGCCCGCTTGCGGCGCCC
GGCGTATCTTGCCGAACTGGCCTGGCAGCGCCATCTTGCGCGTGATTACGATGATCTGGCTACGCTTGAACCCCGGTACC
TCGGTGAGCCGGTGCGAACACCGGCACAACATACCTGA

Upstream 100 bases:

>100_bases
TCAGCCATGTGAGCGAGACCAAGCGGCAGATACGGCTGACGCCCCGTGGGATGCGTTACCGTGAACTACTGCTTAGGTTT
AAGGAGGAGACGTTCGGCTA

Downstream 100 bases:

>100_bases
AGCACGTTGTTACGTTTTGTCTTGCAAAGGTCGCGGAGCGGTTCGGTTGTCCGTGAGACCAGATAGTCACGAGCTGTAGA
TCGCTCTTGTAATGACAGGC

Product: peptidase M22 glycoprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MLLAIDTATALTGLALYDAHGPLAESVWESGRNHTAQLLPQIDALLRYIGATPADVTVLAVGLGPGSWSGLRVGLSLAKG
MALAGDLPLIGIATLEALAYQYAPTPLPVYPLIRLGRDRYATAPFVAQDRLERLAPDRNLTLAELCADVSGRALFCGDLD
AATIAALQRGLGERAVLPAPAARLRRPAYLAELAWQRHLARDYDDLATLEPRYLGEPVRTPAQHT

Sequences:

>Translated_225_residues
MLLAIDTATALTGLALYDAHGPLAESVWESGRNHTAQLLPQIDALLRYIGATPADVTVLAVGLGPGSWSGLRVGLSLAKG
MALAGDLPLIGIATLEALAYQYAPTPLPVYPLIRLGRDRYATAPFVAQDRLERLAPDRNLTLAELCADVSGRALFCGDLD
AATIAALQRGLGERAVLPAPAARLRRPAYLAELAWQRHLARDYDDLATLEPRYLGEPVRTPAQHT
>Mature_225_residues
MLLAIDTATALTGLALYDAHGPLAESVWESGRNHTAQLLPQIDALLRYIGATPADVTVLAVGLGPGSWSGLRVGLSLAKG
MALAGDLPLIGIATLEALAYQYAPTPLPVYPLIRLGRDRYATAPFVAQDRLERLAPDRNLTLAELCADVSGRALFCGDLD
AATIAALQRGLGERAVLPAPAARLRRPAYLAELAWQRHLARDYDDLATLEPRYLGEPVRTPAQHT

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=103, Percent_Identity=39.8058252427184, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 24049; Mature: 24049

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLAIDTATALTGLALYDAHGPLAESVWESGRNHTAQLLPQIDALLRYIGATPADVTVLA
CEEEEEHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEE
VGLGPGSWSGLRVGLSLAKGMALAGDLPLIGIATLEALAYQYAPTPLPVYPLIRLGRDRY
EECCCCCCCHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC
ATAPFVAQDRLERLAPDRNLTLAELCADVSGRALFCGDLDAATIAALQRGLGERAVLPAP
CCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCC
AARLRRPAYLAELAWQRHLARDYDDLATLEPRYLGEPVRTPAQHT
HHHHHCHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLLAIDTATALTGLALYDAHGPLAESVWESGRNHTAQLLPQIDALLRYIGATPADVTVLA
CEEEEEHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEE
VGLGPGSWSGLRVGLSLAKGMALAGDLPLIGIATLEALAYQYAPTPLPVYPLIRLGRDRY
EECCCCCCCHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC
ATAPFVAQDRLERLAPDRNLTLAELCADVSGRALFCGDLDAATIAALQRGLGERAVLPAP
CCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCC
AARLRRPAYLAELAWQRHLARDYDDLATLEPRYLGEPVRTPAQHT
HHHHHCHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]